Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21565

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,811,606	-		HGI48_RS21560	0.30	+2.0
4,811,676	+		HGI48_RS21560	0.37	+0.6
4,811,676	+		HGI48_RS21560	0.37	+2.0
4,811,676	+		HGI48_RS21560	0.37	-0.9
4,811,676	+		HGI48_RS21560	0.37	-0.4
4,811,676	+		HGI48_RS21560	0.37	-1.9
4,811,676	+		HGI48_RS21560	0.37	-0.0
4,811,676	+		HGI48_RS21560	0.37	+0.0
4,811,676	+		HGI48_RS21560	0.37	-1.1
4,811,676	+		HGI48_RS21560	0.37	+0.5
4,811,676	+		HGI48_RS21560	0.37	-0.4
4,811,677	-		HGI48_RS21560	0.37	+0.3
4,811,677	-		HGI48_RS21560	0.37	-0.2
4,811,677	-				-0.4
4,811,677	-		HGI48_RS21560	0.37	-1.4
4,811,677	-		HGI48_RS21560	0.37	-1.4
4,811,677	-		HGI48_RS21560	0.37	-0.6
4,811,677	-				-0.4
4,811,677	-		HGI48_RS21560	0.37	-0.8
4,811,677	-		HGI48_RS21560	0.37	-1.8
4,811,677	-		HGI48_RS21560	0.37	+1.6
4,811,677	-		HGI48_RS21560	0.37	+0.4
4,811,677	-		HGI48_RS21560	0.37	-0.8
4,811,677	-		HGI48_RS21560	0.37	-1.8
4,811,677	-		HGI48_RS21560	0.37	-2.6
4,811,764	+		HGI48_RS21560	0.45	-1.0
4,811,765	-		HGI48_RS21560	0.45	+0.2
4,811,765	-		HGI48_RS21560	0.45	-2.0
4,811,765	-		HGI48_RS21560	0.45	-1.1
4,811,765	-		HGI48_RS21560	0.45	+0.9
4,811,793	+				-0.4
4,811,793	+		HGI48_RS21560	0.48	+0.4
4,811,793	+		HGI48_RS21560	0.48	-0.6
4,811,794	-		HGI48_RS21560	0.48	-1.6
4,811,794	-		HGI48_RS21560	0.48	-1.0
4,811,794	-		HGI48_RS21560	0.48	+0.0
4,811,794	-		HGI48_RS21560	0.48	+2.2
4,811,794	-		HGI48_RS21560	0.48	-1.1
4,811,794	-		HGI48_RS21560	0.48	-0.4
4,811,794	-		HGI48_RS21560	0.48	-1.1
4,811,794	-		HGI48_RS21560	0.48	-1.8
4,811,808	+		HGI48_RS21560	0.50	+1.1
4,811,808	+		HGI48_RS21560	0.50	+1.2
4,811,808	+		HGI48_RS21560	0.50	-1.4
4,811,808	+		HGI48_RS21560	0.50	-0.5
4,811,809	-		HGI48_RS21560	0.50	+1.7
4,811,809	-		HGI48_RS21560	0.50	-0.4
4,811,809	-		HGI48_RS21560	0.50	+1.2
4,811,817	-		HGI48_RS21560	0.50	-1.3
4,811,863	+		HGI48_RS21560	0.55	-1.1
4,811,863	+		HGI48_RS21560	0.55	+0.1
4,811,863	+		HGI48_RS21560	0.55	-2.5
4,811,864	-		HGI48_RS21560	0.55	+0.4
4,811,944	-		HGI48_RS21560	0.63	-0.2
4,811,953	-		HGI48_RS21560	0.63	+0.5
4,811,953	-		HGI48_RS21560	0.63	+0.1
4,811,972	+		HGI48_RS21560	0.65	+0.8
4,811,972	+		HGI48_RS21560	0.65	-0.6
4,811,973	-		HGI48_RS21560	0.65	+0.6
4,811,973	-		HGI48_RS21560	0.65	-0.8
4,811,983	-		HGI48_RS21560	0.66	-0.2
4,812,009	-				-0.4
4,812,112	+				-0.4
4,812,128	+				+1.2
4,812,128	+		HGI48_RS21560	0.80	-0.1
4,812,129	-				+1.8
4,812,208	-		HGI48_RS21560	0.88	-0.9
4,812,213	-		HGI48_RS21560	0.88	-1.4
4,812,243	+				-0.2
4,812,243	+				-1.6
4,812,327	+				-0.5
4,812,328	-				-1.5
4,812,347	-				+0.6
4,812,347	-				-1.1
4,812,347	-				-0.1
4,812,352	+				-0.1
4,812,352	+				+0.7
4,812,352	+				-1.5
4,812,352	+				+0.8
4,812,357	+				+1.5
4,812,357	+				-0.9
4,812,357	+				+0.7
4,812,357	+				+0.1
4,812,357	+				-0.4
4,812,358	-				-0.8
4,812,358	-				-1.8
4,812,358	-				+0.9
4,812,358	-				+2.0
4,812,358	-				-0.3
4,812,463	+				+0.2
4,812,464	-				-0.5
4,812,464	-				+0.5
4,812,464	-				+2.0
4,812,480	+				-1.6
4,812,481	-				+0.2
4,812,481	-				-0.6
4,812,481	-				-0.3
4,812,481	-				-0.8
4,812,500	+				-0.2
4,812,500	+				+1.5
4,812,500	+				+0.6
4,812,500	+				+1.2
4,812,501	-				+0.8
4,812,501	-				+0.3
4,812,501	-				+0.5
4,812,501	-				-0.6
4,812,501	-				-0.4
4,812,501	-				-0.1
4,812,524	+				+1.2
4,812,524	+				-0.9
4,812,524	+				-1.1
4,812,524	+				+1.4
4,812,525	-				+0.2
4,812,525	-				+1.0
4,812,525	-				-0.9
4,812,647	+		HGI48_RS21565	0.15	-0.3
4,812,726	+		HGI48_RS21565	0.23	-0.4
4,812,879	+		HGI48_RS21565	0.39	-0.8
4,812,924	+		HGI48_RS21565	0.44	-0.5
4,812,925	-		HGI48_RS21565	0.44	+0.5
4,812,925	-		HGI48_RS21565	0.44	+0.3
4,813,042	+		HGI48_RS21565	0.56	+0.9
4,813,050	+		HGI48_RS21565	0.57	+0.2
4,813,050	+		HGI48_RS21565	0.57	-0.8
4,813,051	-		HGI48_RS21565	0.57	-1.6
4,813,051	-		HGI48_RS21565	0.57	-1.4
4,813,051	-		HGI48_RS21565	0.57	+0.8
4,813,051	-		HGI48_RS21565	0.57	-0.0
4,813,051	-				-0.4
4,813,051	-				+0.2
4,813,051	-		HGI48_RS21565	0.57	-1.1
4,813,114	-		HGI48_RS21565	0.64	+0.2
4,813,130	+		HGI48_RS21565	0.66	-0.4
4,813,142	+		HGI48_RS21565	0.67	-1.9
4,813,180	+		HGI48_RS21565	0.71	+0.8
4,813,180	+		HGI48_RS21565	0.71	-0.8
4,813,257	+		HGI48_RS21565	0.79	-1.6
4,813,257	+		HGI48_RS21565	0.79	-0.4
4,813,257	+				-0.4
4,813,258	-		HGI48_RS21565	0.79	-1.1
4,813,258	-		HGI48_RS21565	0.79	-0.4
4,813,281	+				-0.4
4,813,281	+		HGI48_RS21565	0.81	+1.0
4,813,281	+				+1.2
4,813,281	+		HGI48_RS21565	0.81	-0.8
4,813,282	-		HGI48_RS21565	0.81	+0.3
4,813,282	-		HGI48_RS21565	0.81	-1.1
4,813,282	-		HGI48_RS21565	0.81	-2.0
4,813,282	-		HGI48_RS21565	0.81	-1.1
4,813,282	-		HGI48_RS21565	0.81	+0.3
4,813,283	+		HGI48_RS21565	0.81	-1.2
4,813,391	+				-0.5
4,813,392	-				+3.0
4,813,392	-				-0.8
4,813,392	-				+0.9
4,813,392	-				+0.2
4,813,605	+		HGI48_RS21570	0.16	+0.9
4,813,605	+		HGI48_RS21570	0.16	-1.1
4,813,606	-		HGI48_RS21570	0.16	+0.6
4,813,636	+		HGI48_RS21570	0.20	-0.3
4,813,636	+		HGI48_RS21570	0.20	+0.5
4,813,636	+		HGI48_RS21570	0.20	+0.8
4,813,636	+		HGI48_RS21570	0.20	+0.9
4,813,637	-		HGI48_RS21570	0.20	-0.5
4,813,637	-		HGI48_RS21570	0.20	+0.2
4,813,637	-		HGI48_RS21570	0.20	-0.0
4,813,779	-		HGI48_RS21570	0.36	-0.2
4,813,829	-		HGI48_RS21570	0.42	-0.6
4,813,881	-		HGI48_RS21570	0.47	+0.2
4,813,881	-		HGI48_RS21570	0.47	+0.6
4,813,882	+		HGI48_RS21570	0.48	-1.5
4,813,882	+		HGI48_RS21570	0.48	-0.4
4,813,882	+		HGI48_RS21570	0.48	-0.2
4,813,883	-		HGI48_RS21570	0.48	+0.5
4,813,883	-		HGI48_RS21570	0.48	+0.2
4,813,883	-		HGI48_RS21570	0.48	+0.8
4,814,021	+		HGI48_RS21570	0.63	+0.4
4,814,032	+		HGI48_RS21570	0.64	+0.3
4,814,149	+		HGI48_RS21570	0.78	-1.5
4,814,149	+		HGI48_RS21570	0.78	-1.6
4,814,149	+		HGI48_RS21570	0.78	-1.1
4,814,150	-		HGI48_RS21570	0.78	+1.1
4,814,150	-		HGI48_RS21570	0.78	+0.4
4,814,150	-		HGI48_RS21570	0.78	-1.6
4,814,345	+				-0.5
4,814,370	-				-0.4
4,814,370	-				+1.0
4,814,382	+				-1.9
4,814,382	+				+1.2
4,814,382	+				-1.6
4,814,382	+				+0.2
4,814,382	+				-0.6
4,814,382	+				-1.1
4,814,382	+				+0.6
4,814,382	+				+0.5
4,814,382	+				-0.3
4,814,382	+				+4.0
4,814,382	+				+0.3
4,814,383	-				+0.4
4,814,383	-				+0.2
4,814,383	-				-0.4
4,814,383	-				-1.6
4,814,383	-				+0.5
4,814,383	-				-1.9
4,814,383	-				+0.2
4,814,383	-				-0.1
4,814,383	-				+0.2
4,814,383	-				+1.2
4,814,383	-				+0.6
4,814,383	-				-1.6
4,814,383	-				-0.1
4,814,384	+				-1.4
4,814,384	+				-0.8
4,814,384	+				-2.2
4,814,385	-				-0.1
4,814,385	-				+0.8
4,814,385	-				-0.9
4,814,385	-				-0.0
4,814,385	-				-1.4
4,814,385	-				+0.2
4,814,385	-				+0.2
4,814,385	-				-1.6
4,814,385	-				-0.4
4,814,385	-				+2.2
4,814,443	+				+0.2
4,814,443	+				-0.4
4,814,444	-				+0.6
4,814,444	-				-0.8