Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19460

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,346,304	+		HGI48_RS19455	0.23	-0.5
4,346,304	+		HGI48_RS19455	0.23	-2.4
4,346,304	+				+1.2
4,346,361	+		HGI48_RS19455	0.28	-0.5
4,346,361	+		HGI48_RS19455	0.28	-0.4
4,346,362	-		HGI48_RS19455	0.28	-0.4
4,346,362	-		HGI48_RS19455	0.28	+0.7
4,346,419	+		HGI48_RS19455	0.33	-0.6
4,346,420	-		HGI48_RS19455	0.33	-0.5
4,346,420	-		HGI48_RS19455	0.33	-0.0
4,346,470	+		HGI48_RS19455	0.38	-0.6
4,346,471	-		HGI48_RS19455	0.38	-1.1
4,346,572	-		HGI48_RS19455	0.47	-0.8
4,346,572	-		HGI48_RS19455	0.47	-0.8
4,346,693	+		HGI48_RS19455	0.58	-0.2
4,346,693	+		HGI48_RS19455	0.58	-0.1
4,346,694	-		HGI48_RS19455	0.58	-1.1
4,346,811	+		HGI48_RS19455	0.69	-0.3
4,346,811	+				+2.8
4,346,812	-		HGI48_RS19455	0.69	-3.2
4,346,842	-		HGI48_RS19455	0.72	+0.8
4,346,845	-		HGI48_RS19455	0.72	-0.2
4,346,893	+				-0.4
4,346,893	+		HGI48_RS19455	0.76	-0.1
4,346,893	+		HGI48_RS19455	0.76	+0.5
4,346,893	+		HGI48_RS19455	0.76	+0.2
4,346,893	+				+2.0
4,346,893	+		HGI48_RS19455	0.76	+0.8
4,346,893	+		HGI48_RS19455	0.76	+0.9
4,346,893	+		HGI48_RS19455	0.76	-0.4
4,346,894	-		HGI48_RS19455	0.77	-1.4
4,346,894	-		HGI48_RS19455	0.77	+0.1
4,346,894	-		HGI48_RS19455	0.77	+1.2
4,346,894	-		HGI48_RS19455	0.77	+3.0
4,346,894	-		HGI48_RS19455	0.77	+0.8
4,346,894	-		HGI48_RS19455	0.77	-1.8
4,346,894	-		HGI48_RS19455	0.77	-0.4
4,346,894	-		HGI48_RS19455	0.77	-1.0
4,346,897	-		HGI48_RS19455	0.77	+1.7
4,347,145	+				+0.6
4,347,145	+				-1.7
4,347,146	-				-0.0
4,347,146	-				-1.6
4,347,146	-				-1.1
4,347,146	-				-0.5
4,347,152	+				-0.4
4,347,152	+				-0.7
4,347,152	+				+0.2
4,347,153	-				+0.2
4,347,155	+				+1.6
4,347,155	+				-0.8
4,347,156	-				-0.5
4,347,167	+				+1.0
4,347,167	+				+1.0
4,347,168	-				+0.5
4,347,211	-				-0.8
4,347,211	-				-1.6
4,347,211	-				+0.8
4,347,307	-				-0.1
4,347,348	+				-1.4
4,347,348	+				+0.5
4,347,348	+				-1.9
4,347,349	-				+0.2
4,347,349	-				+0.8
4,347,352	+				-0.0
4,347,352	+				-1.9
4,347,352	+				-1.4
4,347,353	-				+0.5
4,347,353	-				-0.4
4,347,353	-				+0.1
4,347,353	-				-0.1
4,347,353	-				-0.2
4,347,353	-				+1.5
4,347,399	+		HGI48_RS19460	0.13	-1.4
4,347,399	+		HGI48_RS19460	0.13	+0.8
4,347,399	+		HGI48_RS19460	0.13	-0.1
4,347,400	-		HGI48_RS19460	0.13	+0.4
4,347,400	-		HGI48_RS19460	0.13	+0.7
4,347,436	+		HGI48_RS19460	0.18	+0.6
4,347,483	+				+1.2
4,347,483	+		HGI48_RS19460	0.24	-0.0
4,347,484	-		HGI48_RS19460	0.24	-0.4
4,347,639	+		HGI48_RS19460	0.44	-1.1
4,347,705	+		HGI48_RS19460	0.52	+1.5
4,347,705	+		HGI48_RS19460	0.52	-0.5
4,347,705	+		HGI48_RS19460	0.52	+0.7
4,347,705	+		HGI48_RS19460	0.52	+1.2
4,347,705	+		HGI48_RS19460	0.52	-1.4
4,347,705	+		HGI48_RS19460	0.52	-2.6
4,347,706	-				+0.2
4,347,706	-		HGI48_RS19460	0.53	+1.5
4,347,706	-		HGI48_RS19460	0.53	+1.2
4,347,787	+		HGI48_RS19460	0.63	-0.4
4,347,915	+		HGI48_RS19460	0.80	+0.9
4,347,915	+		HGI48_RS19460	0.80	-0.1
4,347,915	+		HGI48_RS19460	0.80	-0.4
4,347,915	+		HGI48_RS19460	0.80	+0.6
4,347,915	+		HGI48_RS19460	0.80	-1.4
4,347,915	+		HGI48_RS19460	0.80	+1.0
4,347,916	-		HGI48_RS19460	0.80	+0.1
4,347,916	-		HGI48_RS19460	0.80	-0.8
4,348,023	-				-0.9
4,348,048	+				+1.6
4,348,048	+				-1.6
4,348,049	-				+1.1
4,348,049	-				-1.4
4,348,049	-				+0.9
4,348,115	+				-0.2
4,348,116	-				-0.4
4,348,116	-				+0.8
4,348,116	-				+1.0
4,348,116	-				-1.1
4,348,116	-				-0.0
4,348,116	-				+0.2
4,348,116	-				+0.2
4,348,116	-				-0.4
4,348,186	+		HGI48_RS19465	0.12	-0.2
4,348,187	-		HGI48_RS19465	0.12	-0.0
4,348,187	-		HGI48_RS19465	0.12	-0.1
4,348,187	-		HGI48_RS19465	0.12	+0.0
4,348,187	-		HGI48_RS19465	0.12	+0.5
4,348,229	+		HGI48_RS19465	0.16	+1.0
4,348,229	+		HGI48_RS19465	0.16	+0.8
4,348,229	+		HGI48_RS19465	0.16	+0.2
4,348,229	+		HGI48_RS19465	0.16	-0.8
4,348,230	-		HGI48_RS19465	0.17	-0.8
4,348,240	+		HGI48_RS19465	0.18	-0.1
4,348,240	+		HGI48_RS19465	0.18	-1.6
4,348,271	+		HGI48_RS19465	0.21	-0.2
4,348,272	-		HGI48_RS19465	0.21	-0.1
4,348,283	+		HGI48_RS19465	0.22	-1.1
4,348,283	+		HGI48_RS19465	0.22	-1.4
4,348,284	-		HGI48_RS19465	0.22	+0.5
4,348,290	-		HGI48_RS19465	0.23	-0.2
4,348,291	+		HGI48_RS19465	0.23	+0.8
4,348,291	+		HGI48_RS19465	0.23	-1.6
4,348,291	+				+0.2
4,348,291	+		HGI48_RS19465	0.23	-1.6
4,348,291	+		HGI48_RS19465	0.23	-1.4
4,348,291	+		HGI48_RS19465	0.23	+0.9
4,348,291	+		HGI48_RS19465	0.23	+1.0
4,348,291	+		HGI48_RS19465	0.23	-0.1
4,348,291	+		HGI48_RS19465	0.23	+0.2
4,348,292	-		HGI48_RS19465	0.23	+0.1
4,348,292	-		HGI48_RS19465	0.23	-0.1
4,348,292	-		HGI48_RS19465	0.23	-0.1
4,348,292	-		HGI48_RS19465	0.23	+0.7
4,348,292	-		HGI48_RS19465	0.23	-0.9
4,348,292	-		HGI48_RS19465	0.23	+0.7
4,348,292	-				+2.0
4,348,292	-		HGI48_RS19465	0.23	+1.3
4,348,292	-		HGI48_RS19465	0.23	-1.9
4,348,292	-		HGI48_RS19465	0.23	+0.2
4,348,292	-		HGI48_RS19465	0.23	+0.2
4,348,292	-		HGI48_RS19465	0.23	+1.1
4,348,309	+		HGI48_RS19465	0.25	+0.2
4,348,325	+		HGI48_RS19465	0.26	-0.2
4,348,325	+		HGI48_RS19465	0.26	+1.4
4,348,326	-		HGI48_RS19465	0.26	+0.7
4,348,326	-		HGI48_RS19465	0.26	-0.3
4,348,326	-		HGI48_RS19465	0.26	-0.1
4,348,368	+		HGI48_RS19465	0.31	-0.4
4,348,369	-		HGI48_RS19465	0.31	-1.4
4,348,392	-		HGI48_RS19465	0.33	+0.2
4,348,394	+		HGI48_RS19465	0.33	-1.4
4,348,395	-		HGI48_RS19465	0.33	-0.7
4,348,415	+		HGI48_RS19465	0.35	+0.2
4,348,415	+		HGI48_RS19465	0.35	+0.6
4,348,415	+		HGI48_RS19465	0.35	+0.9
4,348,418	+		HGI48_RS19465	0.36	-1.1
4,348,418	+		HGI48_RS19465	0.36	-0.9
4,348,418	+		HGI48_RS19465	0.36	+0.7
4,348,419	-		HGI48_RS19465	0.36	-0.9
4,348,470	+		HGI48_RS19465	0.41	-1.7
4,348,470	+		HGI48_RS19465	0.41	+1.0
4,348,470	+		HGI48_RS19465	0.41	-0.8
4,348,470	+		HGI48_RS19465	0.41	+0.2
4,348,470	+		HGI48_RS19465	0.41	+0.9
4,348,470	+		HGI48_RS19465	0.41	+0.2
4,348,471	-		HGI48_RS19465	0.41	+0.4
4,348,471	-		HGI48_RS19465	0.41	+0.3
4,348,521	-		HGI48_RS19465	0.46	-1.4
4,348,522	+		HGI48_RS19465	0.46	+0.2
4,348,522	+		HGI48_RS19465	0.46	-0.9
4,348,522	+		HGI48_RS19465	0.46	-0.9
4,348,523	-		HGI48_RS19465	0.46	-0.5
4,348,523	-				+1.6
4,348,523	-		HGI48_RS19465	0.46	-1.6
4,348,523	-		HGI48_RS19465	0.46	-0.8
4,348,523	-		HGI48_RS19465	0.46	-1.7
4,348,523	-		HGI48_RS19465	0.46	-2.4
4,348,523	-		HGI48_RS19465	0.46	-0.5
4,348,523	-		HGI48_RS19465	0.46	+0.1
4,348,523	-		HGI48_RS19465	0.46	-1.8
4,348,523	-		HGI48_RS19465	0.46	-0.6
4,348,523	-				+1.2
4,348,654	-				+1.2
4,348,654	-		HGI48_RS19465	0.60	-0.8
4,348,661	-		HGI48_RS19465	0.60	+0.6
4,348,711	+		HGI48_RS19465	0.66	-1.6
4,348,711	+		HGI48_RS19465	0.66	-0.7
4,348,711	+		HGI48_RS19465	0.66	+0.5
4,348,711	+		HGI48_RS19465	0.66	-1.5
4,348,711	+				+2.2
4,348,711	+		HGI48_RS19465	0.66	+0.8
4,348,711	+		HGI48_RS19465	0.66	-0.8
4,348,711	+		HGI48_RS19465	0.66	-0.2
4,348,711	+		HGI48_RS19465	0.66	+0.6
4,348,711	+		HGI48_RS19465	0.66	+0.4
4,348,712	-				+1.2
4,348,712	-		HGI48_RS19465	0.66	+1.2
4,348,712	-		HGI48_RS19465	0.66	+0.6
4,348,712	-		HGI48_RS19465	0.66	-0.2
4,348,712	-		HGI48_RS19465	0.66	-0.6
4,348,712	-		HGI48_RS19465	0.66	-0.6
4,348,712	-		HGI48_RS19465	0.66	-1.4
4,348,712	-		HGI48_RS19465	0.66	-0.4
4,348,712	-		HGI48_RS19465	0.66	+1.2
4,348,712	-		HGI48_RS19465	0.66	+0.4
4,348,712	-		HGI48_RS19465	0.66	-0.1
4,348,712	-		HGI48_RS19465	0.66	-1.2
4,348,712	-				+0.6
4,348,712	-		HGI48_RS19465	0.66	+0.2
4,348,712	-		HGI48_RS19465	0.66	-0.1
4,348,713	+		HGI48_RS19465	0.66	-0.6
4,348,714	-		HGI48_RS19465	0.66	-0.8
4,349,001	+				+0.6
4,349,001	+				-0.6
4,349,001	+				+1.5
4,349,001	+				-1.4