Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS02335 and HGI48_RS02340 are separated by 494 nucleotides HGI48_RS02340 and HGI48_RS02345 are separated by 21 nucleotides
HGI48_RS02335: HGI48_RS02335 - DUF1440 domain-containing protein, at 507,275 to 507,817
_RS02335
HGI48_RS02340: HGI48_RS02340 - FAD-dependent 2-octaprenylphenol hydroxylase, at 508,312 to 509,523
_RS02340
HGI48_RS02345: HGI48_RS02345 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 509,545 to 510,723
_RS02345
Position (kb) 508
509
510 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 507.322 kb on + strand at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand at 507.553 kb on + strand, within HGI48_RS02335 at 507.554 kb on - strand, within HGI48_RS02335 at 507.559 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.622 kb on - strand at 507.622 kb on - strand, within HGI48_RS02335 at 507.665 kb on + strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.865 kb on - strand at 507.952 kb on + strand at 508.019 kb on + strand at 508.102 kb on - strand at 509.524 kb on - strand at 509.524 kb on - strand at 509.524 kb on - strand at 509.581 kb on + strand at 509.581 kb on + strand at 509.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 507,322 + +0.1 507,376 + HGI48_RS02335 0.19 -0.0 507,376 + HGI48_RS02335 0.19 -0.6 507,376 + HGI48_RS02335 0.19 +0.5 507,376 + HGI48_RS02335 0.19 -0.6 507,376 + HGI48_RS02335 0.19 -0.7 507,376 + HGI48_RS02335 0.19 -1.5 507,377 - HGI48_RS02335 0.19 -1.5 507,377 - HGI48_RS02335 0.19 +1.7 507,377 - HGI48_RS02335 0.19 -1.5 507,377 - HGI48_RS02335 0.19 +1.7 507,377 - HGI48_RS02335 0.19 -0.2 507,377 - HGI48_RS02335 0.19 -0.5 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 -1.5 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 -3.0 507,377 - HGI48_RS02335 0.19 -0.5 507,544 - HGI48_RS02335 0.50 -2.6 507,544 - +0.1 507,553 + HGI48_RS02335 0.51 +0.0 507,554 - HGI48_RS02335 0.51 -0.3 507,559 + HGI48_RS02335 0.52 -0.3 507,621 + HGI48_RS02335 0.64 -0.4 507,621 + HGI48_RS02335 0.64 -0.7 507,622 - +1.1 507,622 - HGI48_RS02335 0.64 -0.9 507,665 + HGI48_RS02335 0.72 -0.2 507,666 - HGI48_RS02335 0.72 -1.5 507,666 - HGI48_RS02335 0.72 -1.5 507,865 - +1.7 507,952 + +1.5 508,019 + +2.1 508,102 - -0.3 509,524 - -1.1 509,524 - +0.9 509,524 - -0.5 509,581 + +1.9 509,581 + -0.2 509,582 - -1.2
Or see this region's nucleotide sequence