Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20865

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,662,445	+				+2.0
4,662,489	+		HGI48_RS20860	0.65	-0.1
4,662,489	+		HGI48_RS20860	0.65	+0.7
4,662,490	-		HGI48_RS20860	0.65	-0.1
4,662,490	-		HGI48_RS20860	0.65	-0.5
4,662,490	-		HGI48_RS20860	0.65	-0.2
4,662,490	-		HGI48_RS20860	0.65	-1.8
4,662,495	+		HGI48_RS20860	0.65	-3.0
4,662,496	-		HGI48_RS20860	0.65	-0.1
4,662,496	-		HGI48_RS20860	0.65	+0.5
4,662,496	-		HGI48_RS20860	0.65	-0.5
4,662,676	+		HGI48_RS20860	0.74	-0.6
4,662,676	+				+0.6
4,662,676	+		HGI48_RS20860	0.74	+0.5
4,662,677	-		HGI48_RS20860	0.74	-2.2
4,662,677	-		HGI48_RS20860	0.74	+0.1
4,662,677	-		HGI48_RS20860	0.74	-0.8
4,662,677	-				+1.2
4,662,677	-		HGI48_RS20860	0.74	-0.6
4,662,677	-		HGI48_RS20860	0.74	+0.7
4,662,677	-		HGI48_RS20860	0.74	-0.1
4,662,677	-		HGI48_RS20860	0.74	-1.8
4,662,678	+		HGI48_RS20860	0.74	+0.1
4,662,679	-		HGI48_RS20860	0.74	-0.5
4,662,742	-		HGI48_RS20860	0.77	-0.1
4,662,742	-		HGI48_RS20860	0.77	-0.8
4,662,822	+				+0.2
4,662,822	+				+0.6
4,662,822	+		HGI48_RS20860	0.81	-0.1
4,662,822	+		HGI48_RS20860	0.81	-0.8
4,662,823	-		HGI48_RS20860	0.81	-1.4
4,662,823	-		HGI48_RS20860	0.81	-0.1
4,662,833	-		HGI48_RS20860	0.81	-0.4
4,662,834	+		HGI48_RS20860	0.81	+0.6
4,662,834	+		HGI48_RS20860	0.81	-0.9
4,662,834	+				+0.2
4,662,834	+		HGI48_RS20860	0.81	-0.5
4,662,834	+		HGI48_RS20860	0.81	-0.8
4,662,834	+		HGI48_RS20860	0.81	-0.8
4,662,834	+		HGI48_RS20860	0.81	-1.1
4,662,834	+		HGI48_RS20860	0.81	-1.1
4,662,834	+		HGI48_RS20860	0.81	-2.5
4,662,834	+		HGI48_RS20860	0.81	-1.1
4,662,834	+		HGI48_RS20860	0.81	-0.4
4,662,834	+				+0.6
4,662,834	+		HGI48_RS20860	0.81	-0.8
4,662,834	+		HGI48_RS20860	0.81	+0.1
4,662,834	+		HGI48_RS20860	0.81	+0.7
4,662,834	+				+1.2
4,662,834	+		HGI48_RS20860	0.81	+0.2
4,662,834	+		HGI48_RS20860	0.81	-1.2
4,662,834	+		HGI48_RS20860	0.81	+0.2
4,662,834	+		HGI48_RS20860	0.81	-0.1
4,662,834	+				-0.4
4,662,834	+		HGI48_RS20860	0.81	-1.1
4,662,835	-		HGI48_RS20860	0.81	-1.4
4,662,835	-		HGI48_RS20860	0.81	-1.0
4,662,835	-		HGI48_RS20860	0.81	+2.4
4,662,835	-		HGI48_RS20860	0.81	-2.1
4,662,835	-		HGI48_RS20860	0.81	-0.6
4,662,835	-		HGI48_RS20860	0.81	+1.2
4,662,835	-		HGI48_RS20860	0.81	+0.1
4,662,835	-		HGI48_RS20860	0.81	-0.8
4,662,835	-		HGI48_RS20860	0.81	-0.5
4,662,835	-		HGI48_RS20860	0.81	+0.9
4,662,835	-				+0.2
4,662,835	-				+0.6
4,662,835	-		HGI48_RS20860	0.81	-1.9
4,662,835	-		HGI48_RS20860	0.81	-1.8
4,662,835	-		HGI48_RS20860	0.81	+1.0
4,662,920	+		HGI48_RS20860	0.85	-0.1
4,662,920	+		HGI48_RS20860	0.85	-1.6
4,662,921	-		HGI48_RS20860	0.85	-0.9
4,662,923	+		HGI48_RS20860	0.85	-0.1
4,662,924	-		HGI48_RS20860	0.85	-0.5
4,662,942	+		HGI48_RS20860	0.86	-0.6
4,662,942	+		HGI48_RS20860	0.86	+1.6
4,662,942	+		HGI48_RS20860	0.86	-1.5
4,662,942	+		HGI48_RS20860	0.86	-0.5
4,662,943	-		HGI48_RS20860	0.86	-0.5
4,662,943	-		HGI48_RS20860	0.86	-0.2
4,662,943	-		HGI48_RS20860	0.86	+0.6
4,662,943	-		HGI48_RS20860	0.86	+1.1
4,662,943	-		HGI48_RS20860	0.86	-0.8
4,662,943	-				-0.4
4,662,959	+		HGI48_RS20860	0.87	-0.9
4,662,959	+		HGI48_RS20860	0.87	-0.4
4,662,960	-		HGI48_RS20860	0.87	+0.1
4,663,023	+				-1.5
4,663,024	-				+0.2
4,663,025	+				-0.0
4,663,025	+				+1.5
4,663,025	+				-0.3
4,663,025	+				-0.7
4,663,025	+				-0.9
4,663,025	+				+0.5
4,663,025	+				+1.2
4,663,025	+				+1.5
4,663,025	+				+0.7
4,663,025	+				-0.8
4,663,026	-				-0.8
4,663,026	-				-1.2
4,663,026	-				-0.1
4,663,026	-				+0.5
4,663,026	-				+0.3
4,663,026	-				-1.1
4,663,026	-				+0.9
4,663,026	-				-1.5
4,663,026	-				+1.1
4,663,027	+				-0.9
4,663,027	+				+0.3
4,663,027	+				+1.2
4,663,027	+				+1.5
4,663,027	+				-0.7
4,663,027	+				+0.1
4,663,028	-				+1.3
4,663,028	-				+0.7
4,663,028	-				+2.0
4,663,028	-				-2.3
4,663,028	-				-0.3
4,663,028	-				-1.6
4,663,028	-				-2.0
4,663,028	-				-0.8
4,663,028	-				-0.5
4,663,028	-				-0.1
4,663,028	-				-0.9
4,663,028	-				+0.0
4,663,028	-				-1.6
4,663,028	-				+0.2
4,663,028	-				+1.6
4,663,029	+				-1.0
4,663,064	+				+0.1
4,663,064	+				-1.3
4,663,073	+				-0.6
4,663,074	-				-0.8
4,663,133	+				-0.8
4,663,133	+				+0.1
4,663,133	+				+1.7
4,663,133	+				-1.1
4,663,133	+				-0.5
4,663,133	+				-0.8
4,663,133	+				+0.2
4,663,133	+				-0.8
4,663,134	-				+0.3
4,663,134	-				-0.1
4,663,134	-				-0.5
4,663,134	-				+1.8
4,663,134	-				-0.1
4,663,135	+				+0.6
4,663,135	+				+0.7
4,663,135	+				+0.2
4,663,135	+				+1.9
4,663,136	-				+0.2
4,663,136	-				-0.7
4,663,136	-				-0.7
4,663,136	-				-0.0
4,663,136	-				-1.8
4,663,136	-				+0.0
4,663,136	-				-2.3
4,663,136	-				-0.1
4,663,136	-				-0.2
4,663,138	-				+1.2
4,663,138	-				-0.3
4,663,200	-				+0.8
4,663,232	+				-1.2
4,663,232	+				-1.8
4,663,232	+				+0.5
4,663,234	+				+3.2
4,663,234	+				+0.0
4,663,235	-				-0.3
4,663,235	-				+0.8
4,663,242	+				-1.2
4,663,243	-				+2.1
4,663,246	+				+0.2
4,663,246	+				-1.1
4,663,247	-				+0.0
4,663,247	-				+0.4
4,663,247	-				+1.2
4,663,323	+				-1.9
4,663,324	-				-1.3
4,663,339	+				-1.6
4,663,339	+				-0.3
4,663,361	-				-0.8
4,663,434	-		HGI48_RS20865	0.12	-0.1
4,663,434	-		HGI48_RS20865	0.12	-1.9
4,663,528	-		HGI48_RS20865	0.23	+0.5
4,663,624	+		HGI48_RS20865	0.35	+0.1
4,663,624	+		HGI48_RS20865	0.35	-1.1
4,663,624	+		HGI48_RS20865	0.35	-0.3
4,663,624	+		HGI48_RS20865	0.35	-0.1
4,663,624	+		HGI48_RS20865	0.35	+0.9
4,663,624	+		HGI48_RS20865	0.35	-0.2
4,663,625	-		HGI48_RS20865	0.35	+0.9
4,663,625	-		HGI48_RS20865	0.35	-1.8
4,663,625	-		HGI48_RS20865	0.35	-0.8
4,663,842	+		HGI48_RS20865	0.62	+0.8
4,663,842	+		HGI48_RS20865	0.62	-0.3
4,663,863	-		HGI48_RS20865	0.64	-1.3
4,663,863	-				+1.2
4,663,863	-		HGI48_RS20865	0.64	+0.2
4,663,863	-		HGI48_RS20865	0.64	+0.2
4,663,863	-		HGI48_RS20865	0.64	-0.3
4,663,863	-		HGI48_RS20865	0.64	-1.0
4,663,919	+		HGI48_RS20865	0.71	+0.6
4,663,919	+		HGI48_RS20865	0.71	+0.6
4,663,920	-		HGI48_RS20865	0.71	+0.2
4,663,920	-		HGI48_RS20865	0.71	+0.8
4,663,981	+				+1.2
4,663,981	+		HGI48_RS20865	0.79	-1.1
4,663,981	+		HGI48_RS20865	0.79	+0.2
4,663,982	-		HGI48_RS20865	0.79	+0.0
4,663,982	-		HGI48_RS20865	0.79	+0.3
4,664,084	-				+0.7
4,664,145	+				+0.2
4,664,154	-				-0.3
4,664,234	+				+1.2
4,664,234	+				-0.3
4,664,235	-		HGI48_RS20870	0.15	+1.7
4,664,235	-		HGI48_RS20870	0.15	-0.8
4,664,235	-				-0.3
4,664,500	+		HGI48_RS20870	0.57	+0.2
4,664,500	+		HGI48_RS20870	0.57	-0.3
4,664,500	+		HGI48_RS20870	0.57	+1.6
4,664,500	+		HGI48_RS20870	0.57	+0.2
4,664,500	+		HGI48_RS20870	0.57	-0.5
4,664,500	+		HGI48_RS20870	0.57	+0.2
4,664,500	+				+0.2
4,664,500	+		HGI48_RS20870	0.57	-1.8
4,664,501	-		HGI48_RS20870	0.57	-0.2
4,664,501	-		HGI48_RS20870	0.57	-0.1
4,664,501	-		HGI48_RS20870	0.57	+0.5
4,664,651	-		HGI48_RS20870	0.82	+0.3
4,664,651	-		HGI48_RS20870	0.82	+0.1
4,664,651	-		HGI48_RS20870	0.82	-1.1
4,664,682	-		HGI48_RS20870	0.87	+0.7
4,664,746	+				+0.6
4,664,747	-				+1.4
4,664,754	+				+0.2
4,664,766	+				-2.1
4,664,770	+				-0.5
4,664,801	-				-0.3
4,664,801	-				+0.9
4,664,802	+				-0.3
4,664,803	-				+0.7
4,664,848	-				+0.1
4,664,848	-				-1.8
4,664,876	-				+1.2
4,664,896	+				-1.1
4,664,907	+				-1.3
4,664,923	+				+1.1
4,664,941	+				-1.5
4,664,941	+				+0.7
4,664,977	+				+0.2
4,664,977	+				+0.5
4,664,977	+				-2.3
4,664,977	+				+1.2
4,665,030	-				+0.2
4,665,030	-				+1.0
4,665,045	+				-0.2
4,665,046	-				-1.6
4,665,046	-				+0.7
4,665,046	-				-0.0
4,665,046	-				-1.1
4,665,050	+				+0.1
4,665,050	+				-0.8
4,665,074	+				-0.7
4,665,074	+				-1.5
4,665,075	-				-0.2
4,665,078	+				-0.6
4,665,078	+				+0.6
4,665,079	-				-1.1
4,665,104	-				-0.8
4,665,111	+				-1.3
4,665,135	+				+0.8
4,665,136	-				-0.7