Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17865

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,010,171	-		HGI48_RS17855	0.54	+0.8
4,010,180	+		HGI48_RS17855	0.55	+1.4
4,010,181	-		HGI48_RS17855	0.56	+0.1
4,010,181	-		HGI48_RS17855	0.56	-0.1
4,010,181	-		HGI48_RS17855	0.56	+0.8
4,010,181	-		HGI48_RS17855	0.56	+0.5
4,010,181	-		HGI48_RS17855	0.56	+0.1
4,010,183	+		HGI48_RS17855	0.56	+0.1
4,010,184	-		HGI48_RS17855	0.56	-0.9
4,010,248	-		HGI48_RS17855	0.64	+1.1
4,010,616	+				+1.1
4,010,617	-				-1.7
4,010,669	-				+0.2
4,010,702	-				-0.5
4,010,702	-				-0.9
4,010,747	-				-0.1
4,010,801	+		HGI48_RS17860	0.26	-2.1
4,010,810	-		HGI48_RS17860	0.30	+2.1
4,010,864	+		HGI48_RS17860	0.55	+0.4
4,010,865	-		HGI48_RS17860	0.56	+0.8
4,010,882	+		HGI48_RS17860	0.63	+1.0
4,010,882	+		HGI48_RS17860	0.63	-0.1
4,010,882	+		HGI48_RS17860	0.63	-1.2
4,010,882	+				-0.5
4,010,883	-		HGI48_RS17860	0.64	+0.4
4,010,883	-		HGI48_RS17860	0.64	-0.7
4,010,883	-		HGI48_RS17860	0.64	-0.2
4,010,883	-		HGI48_RS17860	0.64	+0.1
4,010,883	-		HGI48_RS17860	0.64	+0.6
4,010,883	-		HGI48_RS17860	0.64	+0.6
4,010,883	-		HGI48_RS17860	0.64	-0.8
4,010,883	-		HGI48_RS17860	0.64	-1.5
4,010,883	-		HGI48_RS17860	0.64	-1.8
4,010,883	-		HGI48_RS17860	0.64	+0.9
4,010,883	-		HGI48_RS17860	0.64	-0.5
4,010,886	+		HGI48_RS17860	0.65	+0.1
4,010,887	-		HGI48_RS17860	0.66	-1.2
4,010,887	-		HGI48_RS17860	0.66	-0.4
4,010,921	+		HGI48_RS17860	0.81	-0.0
4,010,922	-		HGI48_RS17860	0.82	-1.5
4,010,942	+				+1.7
4,010,942	+				-0.2
4,010,974	+				+1.9
4,010,974	+				+0.8
4,010,975	-				+0.1
4,010,976	+				+0.8
4,010,989	-				-1.9
4,010,989	-				+0.1
4,011,072	+				-0.6
4,011,073	-				-0.6
4,011,090	+				-1.7
4,011,094	+				-0.0
4,011,168	+				-0.3
4,011,169	-				+0.9
4,011,189	+				+1.1
4,011,221	+				-0.5
4,011,221	+				-1.2
4,011,222	-				-1.5
4,011,222	-				+1.2
4,011,222	-				+2.7
4,011,414	+				+1.5
4,011,414	+		HGI48_RS17865	0.18	-0.7
4,011,414	+		HGI48_RS17865	0.18	+0.8
4,011,415	-		HGI48_RS17865	0.18	-0.2
4,011,415	-		HGI48_RS17865	0.18	+0.9
4,011,415	-		HGI48_RS17865	0.18	-0.9
4,011,418	+		HGI48_RS17865	0.18	+0.3
4,011,418	+				+1.1
4,011,418	+				+1.1
4,011,419	-				+1.7
4,011,419	-				-0.5
4,011,457	+		HGI48_RS17865	0.21	-1.5
4,011,457	+		HGI48_RS17865	0.21	-0.8
4,011,458	-		HGI48_RS17865	0.21	-0.7
4,011,469	+		HGI48_RS17865	0.22	+1.1
4,011,469	+				+1.1
4,011,469	+		HGI48_RS17865	0.22	-0.9
4,011,469	+		HGI48_RS17865	0.22	-0.9
4,011,469	+		HGI48_RS17865	0.22	-0.3
4,011,469	+		HGI48_RS17865	0.22	-0.8
4,011,469	+		HGI48_RS17865	0.22	-0.5
4,011,470	-		HGI48_RS17865	0.22	-1.9
4,011,470	-		HGI48_RS17865	0.22	+0.1
4,011,470	-		HGI48_RS17865	0.22	+0.1
4,011,470	-		HGI48_RS17865	0.22	+0.3
4,011,470	-		HGI48_RS17865	0.22	+0.7
4,011,470	-		HGI48_RS17865	0.22	+0.4
4,011,511	+		HGI48_RS17865	0.25	+1.7
4,011,511	+				+0.1
4,011,511	+		HGI48_RS17865	0.25	-1.7
4,011,511	+		HGI48_RS17865	0.25	+0.1
4,011,511	+		HGI48_RS17865	0.25	+1.1
4,011,512	-		HGI48_RS17865	0.25	-0.5
4,011,512	-		HGI48_RS17865	0.25	-1.7
4,011,512	-		HGI48_RS17865	0.25	-2.2
4,011,512	-		HGI48_RS17865	0.25	-0.1
4,011,577	-		HGI48_RS17865	0.30	+0.8
4,011,607	+		HGI48_RS17865	0.33	+0.0
4,011,636	+		HGI48_RS17865	0.35	-0.9
4,011,644	+				+1.1
4,011,644	+		HGI48_RS17865	0.35	-0.5
4,011,645	-		HGI48_RS17865	0.35	-0.9
4,011,669	-		HGI48_RS17865	0.37	+0.1
4,011,689	+		HGI48_RS17865	0.39	-0.7
4,011,689	+				+1.5
4,011,689	+				+1.1
4,011,689	+				+1.1
4,011,690	-		HGI48_RS17865	0.39	+1.6
4,011,690	-		HGI48_RS17865	0.39	-1.5
4,011,890	-		HGI48_RS17865	0.54	+1.0
4,011,890	-		HGI48_RS17865	0.54	-1.2
4,011,890	-		HGI48_RS17865	0.54	-0.3
4,011,890	-		HGI48_RS17865	0.54	-1.1
4,011,907	+		HGI48_RS17865	0.55	-0.9
4,011,907	+		HGI48_RS17865	0.55	+0.9
4,011,941	-		HGI48_RS17865	0.57	+0.2
4,012,020	+		HGI48_RS17865	0.63	-0.6
4,012,060	+		HGI48_RS17865	0.66	-0.2
4,012,060	+				+0.5
4,012,060	+		HGI48_RS17865	0.66	-0.2
4,012,060	+		HGI48_RS17865	0.66	-0.9
4,012,060	+		HGI48_RS17865	0.66	-0.6
4,012,060	+		HGI48_RS17865	0.66	+0.7
4,012,061	-		HGI48_RS17865	0.66	+0.1
4,012,080	+		HGI48_RS17865	0.68	-0.9
4,012,080	+		HGI48_RS17865	0.68	+0.8
4,012,080	+		HGI48_RS17865	0.68	-0.5
4,012,081	-		HGI48_RS17865	0.68	-0.9
4,012,097	-		HGI48_RS17865	0.69	-0.2
4,012,142	+		HGI48_RS17865	0.72	-1.3
4,012,142	+				+1.8
4,012,216	+				+1.7
4,012,216	+		HGI48_RS17865	0.78	-1.5
4,012,216	+		HGI48_RS17865	0.78	-0.1
4,012,216	+		HGI48_RS17865	0.78	+2.1
4,012,217	-		HGI48_RS17865	0.78	+0.4
4,012,217	-		HGI48_RS17865	0.78	+1.1
4,012,217	-		HGI48_RS17865	0.78	-0.9
4,012,217	-		HGI48_RS17865	0.78	-2.1
4,012,323	+		HGI48_RS17865	0.86	-0.5
4,012,324	-		HGI48_RS17865	0.86	-0.5
4,012,361	+		HGI48_RS17865	0.88	+0.4
4,012,361	+		HGI48_RS17865	0.88	+0.7
4,012,362	-		HGI48_RS17865	0.89	+0.6
4,012,381	+				-0.7
4,012,381	+				+1.5
4,012,381	+				-0.5
4,012,381	+				-0.9
4,012,381	+				-0.5
4,012,382	-				+0.6
4,012,382	-				+0.5
4,012,398	+				-0.1
4,012,424	-				-1.2
4,012,424	-				-0.1
4,012,424	-				-0.4
4,012,529	+				-1.2
4,012,529	+				+1.1
4,012,529	+				+1.1
4,012,529	+				+2.9
4,012,529	+				+0.8
4,012,529	+				+0.4
4,012,530	-				+0.8
4,012,530	-				-0.4
4,012,530	-				+0.5
4,012,530	-				-1.2
4,012,530	-				-1.4
4,012,530	-				-0.4
4,012,532	+				+0.1
4,012,533	-				-0.9
4,012,533	-				-1.7
4,012,596	+				+0.1
4,012,605	+				+1.6
4,012,605	+				+0.4
4,012,605	+				+0.2
4,012,605	+				-1.8
4,012,605	+				+0.9
4,012,605	+				+0.1
4,012,606	-				-0.2
4,012,606	-				-0.8
4,012,606	-				-1.4
4,012,610	+				-0.7
4,012,610	+				+0.8
4,012,611	-				-0.2
4,012,611	-				-0.7
4,012,614	+				+1.3
4,012,614	+				-0.1
4,012,614	+				+0.3
4,012,615	-				+1.1
4,012,615	-				+0.5
4,012,615	-				-1.2
4,012,643	+				-0.8
4,012,644	-				+2.7
4,012,644	-				-0.2
4,012,644	-				-0.3
4,012,644	-				-0.9
4,012,651	+				+2.4
4,012,651	+				+3.1
4,012,656	+				+0.9
4,012,656	+				-1.4
4,012,656	+				+0.2
4,012,657	-				+1.1
4,012,657	-				-0.2
4,012,657	-				-0.2
4,012,657	-				+0.7
4,012,660	+				-2.1
4,012,660	+				-1.0
4,012,660	+				+0.5
4,012,661	-				+0.7
4,012,748	-		HGI48_RS17870	0.13	+0.1
4,012,791	-		HGI48_RS17870	0.18	-0.3
4,012,797	+		HGI48_RS17870	0.18	-0.1
4,012,872	+		HGI48_RS17870	0.27	-0.1
4,012,919	+		HGI48_RS17870	0.33	+1.4
4,012,920	-				+0.5
4,012,920	-		HGI48_RS17870	0.33	-0.8
4,013,214	+		HGI48_RS17870	0.67	+0.4
4,013,223	+		HGI48_RS17870	0.68	-1.9
4,013,279	+		HGI48_RS17870	0.75	-1.2
4,013,279	+				+1.1
4,013,279	+				-0.5
4,013,279	+				-0.5
4,013,279	+		HGI48_RS17870	0.75	+0.4
4,013,280	-		HGI48_RS17870	0.75	-0.5
4,013,280	-		HGI48_RS17870	0.75	+0.1
4,013,280	-		HGI48_RS17870	0.75	-0.5
4,013,280	-		HGI48_RS17870	0.75	-0.5
4,013,280	-		HGI48_RS17870	0.75	-1.1
4,013,477	+				-0.5
4,013,477	+				-0.5
4,013,477	+				-0.4
4,013,478	-				+0.1
4,013,482	+				-0.7
4,013,482	+				-1.5
4,013,486	+				-0.2
4,013,486	+				-0.2
4,013,487	-				-0.0
4,013,487	-				-1.0
4,013,487	-				+0.2
4,013,487	-				-0.6
4,013,487	-				+1.1
4,013,487	-				+0.1