Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03595 and HGI48_RS03600 are separated by 80 nucleotides HGI48_RS03600 and HGI48_RS03605 are separated by 88 nucleotides
HGI48_RS03595: HGI48_RS03595 - enolase, at 760,901 to 762,055
_RS03595
HGI48_RS03600: HGI48_RS03600 - ABC transporter substrate-binding protein, at 762,136 to 763,746
_RS03600
HGI48_RS03605: HGI48_RS03605 - ABC transporter permease, at 763,835 to 764,893
_RS03605
Position (kb) 762
763
764 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 762.013 kb on + strand at 762.037 kb on + strand at 762.037 kb on + strand at 762.135 kb on - strand at 762.152 kb on + strand at 762.152 kb on + strand at 762.152 kb on + strand at 762.152 kb on + strand at 762.152 kb on + strand at 762.153 kb on - strand at 762.184 kb on - strand at 762.322 kb on + strand, within HGI48_RS03600 at 762.323 kb on - strand, within HGI48_RS03600 at 762.336 kb on - strand, within HGI48_RS03600 at 762.336 kb on - strand, within HGI48_RS03600 at 762.336 kb on - strand, within HGI48_RS03600 at 762.396 kb on - strand, within HGI48_RS03600 at 762.541 kb on + strand at 762.636 kb on + strand, within HGI48_RS03600 at 762.636 kb on + strand, within HGI48_RS03600 at 762.636 kb on + strand, within HGI48_RS03600 at 762.637 kb on - strand, within HGI48_RS03600 at 762.643 kb on + strand, within HGI48_RS03600 at 762.644 kb on - strand, within HGI48_RS03600 at 762.644 kb on - strand, within HGI48_RS03600 at 762.842 kb on + strand, within HGI48_RS03600 at 762.843 kb on - strand, within HGI48_RS03600 at 762.864 kb on + strand, within HGI48_RS03600 at 762.864 kb on + strand, within HGI48_RS03600 at 762.864 kb on + strand, within HGI48_RS03600 at 762.865 kb on - strand, within HGI48_RS03600 at 762.865 kb on - strand, within HGI48_RS03600 at 762.964 kb on - strand, within HGI48_RS03600 at 762.964 kb on - strand, within HGI48_RS03600 at 763.003 kb on + strand, within HGI48_RS03600 at 763.003 kb on + strand, within HGI48_RS03600 at 763.004 kb on - strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.006 kb on + strand, within HGI48_RS03600 at 763.007 kb on - strand, within HGI48_RS03600 at 763.007 kb on - strand, within HGI48_RS03600 at 763.033 kb on + strand, within HGI48_RS03600 at 763.069 kb on + strand, within HGI48_RS03600 at 763.114 kb on + strand, within HGI48_RS03600 at 763.123 kb on + strand, within HGI48_RS03600 at 763.123 kb on + strand, within HGI48_RS03600 at 763.124 kb on - strand, within HGI48_RS03600 at 763.124 kb on - strand, within HGI48_RS03600 at 763.178 kb on - strand, within HGI48_RS03600 at 763.288 kb on - strand, within HGI48_RS03600 at 763.361 kb on - strand, within HGI48_RS03600 at 763.456 kb on + strand, within HGI48_RS03600 at 763.457 kb on - strand, within HGI48_RS03600 at 763.457 kb on - strand, within HGI48_RS03600 at 763.457 kb on - strand, within HGI48_RS03600 at 763.524 kb on + strand, within HGI48_RS03600 at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.591 kb on + strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.592 kb on - strand at 763.593 kb on + strand at 763.593 kb on + strand at 763.594 kb on - strand at 763.594 kb on - strand at 763.613 kb on - strand at 763.690 kb on + strand at 763.690 kb on + strand at 763.690 kb on + strand at 763.690 kb on + strand at 763.690 kb on + strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.691 kb on - strand at 763.732 kb on + strand at 763.732 kb on + strand at 763.732 kb on + strand at 763.744 kb on + strand at 763.744 kb on + strand at 763.745 kb on - strand at 763.745 kb on - strand at 763.745 kb on - strand at 763.957 kb on + strand, within HGI48_RS03605 at 763.958 kb on - strand, within HGI48_RS03605 at 763.958 kb on - strand, within HGI48_RS03605 at 763.979 kb on - strand, within HGI48_RS03605 at 764.027 kb on + strand, within HGI48_RS03605 at 764.027 kb on + strand, within HGI48_RS03605 at 764.027 kb on + strand, within HGI48_RS03605 at 764.027 kb on + strand, within HGI48_RS03605 at 764.027 kb on + strand, within HGI48_RS03605 at 764.028 kb on - strand, within HGI48_RS03605 at 764.028 kb on - strand, within HGI48_RS03605 at 764.028 kb on - strand, within HGI48_RS03605 at 764.028 kb on - strand, within HGI48_RS03605 at 764.028 kb on - strand, within HGI48_RS03605 at 764.069 kb on + strand, within HGI48_RS03605 at 764.069 kb on + strand, within HGI48_RS03605 at 764.069 kb on + strand, within HGI48_RS03605 at 764.069 kb on + strand, within HGI48_RS03605 at 764.069 kb on + strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.070 kb on - strand, within HGI48_RS03605 at 764.088 kb on - strand, within HGI48_RS03605 at 764.155 kb on + strand at 764.155 kb on + strand, within HGI48_RS03605 at 764.156 kb on - strand, within HGI48_RS03605 at 764.158 kb on + strand, within HGI48_RS03605 at 764.159 kb on - strand, within HGI48_RS03605 at 764.274 kb on - strand, within HGI48_RS03605 at 764.274 kb on - strand, within HGI48_RS03605 at 764.274 kb on - strand, within HGI48_RS03605 at 764.274 kb on - strand, within HGI48_RS03605 at 764.288 kb on - strand, within HGI48_RS03605 at 764.351 kb on + strand, within HGI48_RS03605 at 764.351 kb on + strand at 764.351 kb on + strand, within HGI48_RS03605 at 764.351 kb on + strand, within HGI48_RS03605 at 764.351 kb on + strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand at 764.352 kb on - strand, within HGI48_RS03605 at 764.352 kb on - strand, within HGI48_RS03605 at 764.469 kb on + strand, within HGI48_RS03605 at 764.469 kb on + strand, within HGI48_RS03605 at 764.470 kb on - strand, within HGI48_RS03605 at 764.470 kb on - strand, within HGI48_RS03605 at 764.470 kb on - strand, within HGI48_RS03605 at 764.470 kb on - strand, within HGI48_RS03605 at 764.534 kb on + strand, within HGI48_RS03605 at 764.534 kb on + strand, within HGI48_RS03605 at 764.534 kb on + strand, within HGI48_RS03605 at 764.534 kb on + strand, within HGI48_RS03605 at 764.535 kb on - strand, within HGI48_RS03605 at 764.535 kb on - strand, within HGI48_RS03605 at 764.535 kb on - strand, within HGI48_RS03605 at 764.535 kb on - strand, within HGI48_RS03605 at 764.546 kb on - strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.585 kb on + strand, within HGI48_RS03605 at 764.586 kb on - strand, within HGI48_RS03605 at 764.586 kb on - strand, within HGI48_RS03605 at 764.716 kb on - strand, within HGI48_RS03605 at 764.718 kb on + strand, within HGI48_RS03605 at 764.718 kb on + strand at 764.718 kb on + strand, within HGI48_RS03605 at 764.719 kb on - strand, within HGI48_RS03605 at 764.719 kb on - strand, within HGI48_RS03605 at 764.719 kb on - strand at 764.719 kb on - strand, within HGI48_RS03605
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 762,013 + +0.1 762,037 + +0.3 762,037 + -0.6 762,135 - +1.3 762,152 + -0.5 762,152 + +0.1 762,152 + -1.2 762,152 + +0.1 762,152 + +0.1 762,153 - -0.8 762,184 - -0.9 762,322 + HGI48_RS03600 0.12 -0.7 762,323 - HGI48_RS03600 0.12 -0.3 762,336 - HGI48_RS03600 0.12 -2.7 762,336 - HGI48_RS03600 0.12 -0.5 762,336 - HGI48_RS03600 0.12 -0.2 762,396 - HGI48_RS03600 0.16 +1.4 762,541 + +2.1 762,636 + HGI48_RS03600 0.31 +0.5 762,636 + HGI48_RS03600 0.31 -1.2 762,636 + HGI48_RS03600 0.31 -0.4 762,637 - HGI48_RS03600 0.31 -0.4 762,643 + HGI48_RS03600 0.31 +0.5 762,644 - HGI48_RS03600 0.32 +0.3 762,644 - HGI48_RS03600 0.32 +1.4 762,842 + HGI48_RS03600 0.44 -0.3 762,843 - HGI48_RS03600 0.44 -0.4 762,864 + HGI48_RS03600 0.45 -1.0 762,864 + HGI48_RS03600 0.45 +0.1 762,864 + HGI48_RS03600 0.45 +1.9 762,865 - HGI48_RS03600 0.45 -1.6 762,865 - HGI48_RS03600 0.45 -1.2 762,964 - HGI48_RS03600 0.51 -0.7 762,964 - HGI48_RS03600 0.51 -0.7 763,003 + HGI48_RS03600 0.54 +0.2 763,003 + HGI48_RS03600 0.54 +0.1 763,004 - HGI48_RS03600 0.54 -0.9 763,006 + HGI48_RS03600 0.54 -0.1 763,006 + HGI48_RS03600 0.54 +0.2 763,006 + HGI48_RS03600 0.54 -0.2 763,006 + HGI48_RS03600 0.54 +0.1 763,006 + HGI48_RS03600 0.54 -1.2 763,006 + HGI48_RS03600 0.54 -2.1 763,006 + HGI48_RS03600 0.54 -0.5 763,007 - HGI48_RS03600 0.54 -0.7 763,007 - HGI48_RS03600 0.54 +0.4 763,033 + HGI48_RS03600 0.56 +0.8 763,069 + HGI48_RS03600 0.58 -1.5 763,114 + HGI48_RS03600 0.61 +0.3 763,123 + HGI48_RS03600 0.61 -0.2 763,123 + HGI48_RS03600 0.61 -1.7 763,124 - HGI48_RS03600 0.61 +0.1 763,124 - HGI48_RS03600 0.61 +1.8 763,178 - HGI48_RS03600 0.65 -0.0 763,288 - HGI48_RS03600 0.72 +0.2 763,361 - HGI48_RS03600 0.76 -0.4 763,456 + HGI48_RS03600 0.82 -1.9 763,457 - HGI48_RS03600 0.82 -0.5 763,457 - HGI48_RS03600 0.82 -1.2 763,457 - HGI48_RS03600 0.82 +0.3 763,524 + HGI48_RS03600 0.86 +0.1 763,591 + -0.6 763,591 + -0.9 763,591 + -2.1 763,591 + -1.2 763,591 + -2.2 763,591 + -1.2 763,591 + +0.9 763,591 + -0.4 763,591 + +0.3 763,591 + -0.7 763,591 + -0.9 763,591 + +0.8 763,591 + -0.7 763,591 + -0.8 763,592 - -0.5 763,592 - +0.8 763,592 - +1.7 763,592 - -0.8 763,592 - -1.1 763,592 - +0.7 763,592 - -1.0 763,592 - -0.5 763,592 - +0.1 763,592 - +0.6 763,592 - -0.7 763,592 - -1.2 763,592 - -0.2 763,592 - -1.5 763,593 + -0.1 763,593 + -0.9 763,594 - +0.2 763,594 - -0.9 763,613 - -0.5 763,690 + -0.8 763,690 + -2.1 763,690 + +0.1 763,690 + -0.5 763,690 + -0.5 763,691 - -0.2 763,691 - +0.8 763,691 - +1.3 763,691 - -1.2 763,691 - -0.2 763,691 - -0.9 763,691 - -0.9 763,691 - +0.1 763,691 - -1.7 763,691 - -0.5 763,732 + -0.7 763,732 + +1.1 763,732 + -0.0 763,744 + +0.7 763,744 + -0.7 763,745 - +1.8 763,745 - -0.9 763,745 - +0.1 763,957 + HGI48_RS03605 0.12 +0.7 763,958 - HGI48_RS03605 0.12 -1.0 763,958 - HGI48_RS03605 0.12 -0.3 763,979 - HGI48_RS03605 0.14 -1.1 764,027 + HGI48_RS03605 0.18 +0.5 764,027 + HGI48_RS03605 0.18 +1.1 764,027 + HGI48_RS03605 0.18 +0.3 764,027 + HGI48_RS03605 0.18 -2.1 764,027 + HGI48_RS03605 0.18 -1.9 764,028 - HGI48_RS03605 0.18 +0.5 764,028 - HGI48_RS03605 0.18 -0.1 764,028 - HGI48_RS03605 0.18 +0.5 764,028 - HGI48_RS03605 0.18 -1.1 764,028 - HGI48_RS03605 0.18 +0.6 764,069 + HGI48_RS03605 0.22 +0.1 764,069 + HGI48_RS03605 0.22 -1.3 764,069 + HGI48_RS03605 0.22 -0.9 764,069 + HGI48_RS03605 0.22 -0.7 764,069 + HGI48_RS03605 0.22 -0.5 764,070 - HGI48_RS03605 0.22 -0.3 764,070 - HGI48_RS03605 0.22 +0.6 764,070 - HGI48_RS03605 0.22 +1.1 764,070 - HGI48_RS03605 0.22 -0.5 764,070 - HGI48_RS03605 0.22 -0.7 764,070 - HGI48_RS03605 0.22 -0.5 764,088 - HGI48_RS03605 0.24 -0.1 764,155 + +0.5 764,155 + HGI48_RS03605 0.30 -0.7 764,156 - HGI48_RS03605 0.30 -1.0 764,158 + HGI48_RS03605 0.31 -1.4 764,159 - HGI48_RS03605 0.31 +0.6 764,274 - HGI48_RS03605 0.41 -1.7 764,274 - HGI48_RS03605 0.41 +0.5 764,274 - HGI48_RS03605 0.41 +1.1 764,274 - HGI48_RS03605 0.41 +1.6 764,288 - HGI48_RS03605 0.43 -1.2 764,351 + HGI48_RS03605 0.49 -0.5 764,351 + -0.5 764,351 + HGI48_RS03605 0.49 -0.4 764,351 + HGI48_RS03605 0.49 +0.1 764,351 + HGI48_RS03605 0.49 -0.5 764,352 - HGI48_RS03605 0.49 -0.2 764,352 - HGI48_RS03605 0.49 -1.2 764,352 - HGI48_RS03605 0.49 -0.3 764,352 - HGI48_RS03605 0.49 -1.5 764,352 - HGI48_RS03605 0.49 +0.1 764,352 - HGI48_RS03605 0.49 +0.1 764,352 - HGI48_RS03605 0.49 -1.2 764,352 - +1.8 764,352 - HGI48_RS03605 0.49 -1.1 764,352 - HGI48_RS03605 0.49 -2.5 764,469 + HGI48_RS03605 0.60 +1.2 764,469 + HGI48_RS03605 0.60 +0.3 764,470 - HGI48_RS03605 0.60 -0.2 764,470 - HGI48_RS03605 0.60 -1.1 764,470 - HGI48_RS03605 0.60 +0.1 764,470 - HGI48_RS03605 0.60 -1.5 764,534 + HGI48_RS03605 0.66 -0.1 764,534 + HGI48_RS03605 0.66 -0.4 764,534 + HGI48_RS03605 0.66 +0.4 764,534 + HGI48_RS03605 0.66 -1.2 764,535 - HGI48_RS03605 0.66 -0.9 764,535 - HGI48_RS03605 0.66 +0.3 764,535 - HGI48_RS03605 0.66 -1.0 764,535 - HGI48_RS03605 0.66 +0.5 764,546 - HGI48_RS03605 0.67 -0.3 764,585 + HGI48_RS03605 0.71 -1.5 764,585 + HGI48_RS03605 0.71 -1.2 764,585 + HGI48_RS03605 0.71 -0.2 764,585 + -0.5 764,585 + HGI48_RS03605 0.71 -0.7 764,585 + HGI48_RS03605 0.71 +2.8 764,585 + HGI48_RS03605 0.71 +0.1 764,585 + HGI48_RS03605 0.71 +0.1 764,585 + HGI48_RS03605 0.71 -1.5 764,585 + HGI48_RS03605 0.71 -1.2 764,585 + HGI48_RS03605 0.71 +0.0 764,586 - HGI48_RS03605 0.71 -0.1 764,586 - HGI48_RS03605 0.71 -0.0 764,716 - HGI48_RS03605 0.83 -2.1 764,718 + HGI48_RS03605 0.83 -0.3 764,718 + +0.5 764,718 + HGI48_RS03605 0.83 -0.1 764,719 - HGI48_RS03605 0.83 -0.1 764,719 - HGI48_RS03605 0.83 -0.5 764,719 - -0.5 764,719 - HGI48_RS03605 0.83 -0.1
Or see this region's nucleotide sequence