Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20655

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,612,561	+		HGI48_RS20650	0.60	-2.2
4,612,562	-		HGI48_RS20650	0.60	+0.5
4,612,636	+		HGI48_RS20650	0.66	-0.3
4,612,636	+		HGI48_RS20650	0.66	-0.6
4,612,636	+		HGI48_RS20650	0.66	-0.0
4,612,636	+		HGI48_RS20650	0.66	+2.2
4,612,637	-		HGI48_RS20650	0.66	+0.1
4,612,637	-		HGI48_RS20650	0.66	+0.1
4,612,637	-		HGI48_RS20650	0.66	+1.6
4,612,639	+		HGI48_RS20650	0.66	+0.6
4,612,639	+				+3.3
4,612,639	+		HGI48_RS20650	0.66	+0.7
4,612,639	+		HGI48_RS20650	0.66	+0.6
4,612,639	+				+4.0
4,612,640	-				-0.6
4,612,640	-		HGI48_RS20650	0.66	-0.6
4,612,640	-		HGI48_RS20650	0.66	-1.0
4,612,640	-		HGI48_RS20650	0.66	-0.8
4,612,640	-		HGI48_RS20650	0.66	+1.3
4,612,705	+		HGI48_RS20650	0.71	+0.6
4,612,771	+		HGI48_RS20650	0.76	-0.3
4,612,771	+		HGI48_RS20650	0.76	-0.0
4,612,771	+		HGI48_RS20650	0.76	-0.0
4,612,771	+		HGI48_RS20650	0.76	-0.0
4,612,772	-		HGI48_RS20650	0.76	-0.6
4,612,784	+		HGI48_RS20650	0.77	-0.7
4,612,785	-		HGI48_RS20650	0.77	-0.2
4,612,822	+		HGI48_RS20650	0.80	+0.3
4,612,822	+		HGI48_RS20650	0.80	+0.6
4,612,822	+		HGI48_RS20650	0.80	+1.0
4,612,891	+		HGI48_RS20650	0.85	-0.4
4,612,891	+		HGI48_RS20650	0.85	-1.3
4,612,891	+		HGI48_RS20650	0.85	+0.2
4,612,891	+		HGI48_RS20650	0.85	-0.6
4,612,892	-		HGI48_RS20650	0.85	+0.1
4,612,892	-		HGI48_RS20650	0.85	+1.0
4,612,892	-		HGI48_RS20650	0.85	+0.1
4,612,892	-		HGI48_RS20650	0.85	+0.5
4,612,903	+		HGI48_RS20650	0.86	-1.4
4,613,048	+				+0.2
4,613,069	+				-0.0
4,613,070	-				-0.1
4,613,070	-				+1.5
4,613,070	-				+2.3
4,613,203	+				-1.4
4,613,217	-				-0.0
4,613,246	-				+0.2
4,613,278	+				-0.4
4,613,278	+				+1.1
4,613,279	-				+0.2
4,613,279	-				-2.5
4,613,356	-				+0.8
4,613,490	-				-0.0
4,613,490	-				-1.0
4,613,493	-				+1.6
4,613,509	-				+0.8
4,613,509	-				+1.3
4,613,509	-				+0.4
4,613,509	-				-0.9
4,613,509	-				-0.4
4,613,509	-				+0.1
4,613,509	-				+0.4
4,613,509	-				+1.3
4,613,509	-				+1.2
4,613,512	+				-1.0
4,613,512	+				-1.2
4,613,512	+				+0.5
4,613,512	+				-0.5
4,613,512	+				+0.3
4,613,513	-				-0.5
4,613,521	+				+0.9
4,613,521	+				+0.4
4,613,521	+				+1.5
4,613,522	-				-0.0
4,613,563	+				-1.2
4,613,564	-				+0.2
4,613,575	+				-1.8
4,613,599	-		HGI48_RS20655	0.11	+1.0
4,613,599	-		HGI48_RS20655	0.11	+1.0
4,613,599	-		HGI48_RS20655	0.11	+0.4
4,613,610	+		HGI48_RS20655	0.12	-0.6
4,613,610	+		HGI48_RS20655	0.12	-2.4
4,613,611	-		HGI48_RS20655	0.12	+0.3
4,613,611	-				+2.4
4,613,611	-		HGI48_RS20655	0.12	-0.3
4,613,682	+		HGI48_RS20655	0.18	+0.2
4,613,694	-		HGI48_RS20655	0.19	-1.0
4,613,754	+		HGI48_RS20655	0.25	-1.0
4,613,758	+				-0.6
4,613,758	+		HGI48_RS20655	0.25	-1.6
4,613,758	+		HGI48_RS20655	0.25	-0.5
4,613,758	+		HGI48_RS20655	0.25	+0.1
4,613,758	+		HGI48_RS20655	0.25	-0.3
4,613,758	+		HGI48_RS20655	0.25	-0.6
4,613,759	-		HGI48_RS20655	0.25	+0.7
4,613,759	-				+3.3
4,613,759	-		HGI48_RS20655	0.25	+1.0
4,613,759	-		HGI48_RS20655	0.25	+0.0
4,613,759	-				+0.4
4,613,759	-		HGI48_RS20655	0.25	-1.4
4,613,762	+		HGI48_RS20655	0.25	-0.3
4,613,763	-				+1.0
4,613,763	-		HGI48_RS20655	0.25	-1.0
4,613,781	+		HGI48_RS20655	0.27	-0.2
4,613,781	+		HGI48_RS20655	0.27	+0.4
4,613,782	-		HGI48_RS20655	0.27	-2.2
4,613,782	-		HGI48_RS20655	0.27	-0.3
4,613,782	-				+1.5
4,613,782	-		HGI48_RS20655	0.27	+0.3
4,613,782	-		HGI48_RS20655	0.27	+0.5
4,613,782	-		HGI48_RS20655	0.27	-0.0
4,613,783	+		HGI48_RS20655	0.27	+1.5
4,613,803	+		HGI48_RS20655	0.29	+0.5
4,613,803	+		HGI48_RS20655	0.29	-1.4
4,613,803	+		HGI48_RS20655	0.29	-0.5
4,613,803	+		HGI48_RS20655	0.29	-0.5
4,613,804	-		HGI48_RS20655	0.29	-1.4
4,613,804	-		HGI48_RS20655	0.29	-0.4
4,613,804	-		HGI48_RS20655	0.29	-0.3
4,613,804	-		HGI48_RS20655	0.29	+0.8
4,613,806	+		HGI48_RS20655	0.29	-0.2
4,613,806	+		HGI48_RS20655	0.29	+0.3
4,613,806	+		HGI48_RS20655	0.29	-0.1
4,613,807	-		HGI48_RS20655	0.29	+2.4
4,613,817	+		HGI48_RS20655	0.30	+1.1
4,613,818	-		HGI48_RS20655	0.30	-0.2
4,613,818	-		HGI48_RS20655	0.30	-0.7
4,613,915	-		HGI48_RS20655	0.38	-1.6
4,613,933	-		HGI48_RS20655	0.40	-0.8
4,613,989	+		HGI48_RS20655	0.44	-0.6
4,613,990	-		HGI48_RS20655	0.45	-0.4
4,613,990	-				+1.0
4,614,001	+		HGI48_RS20655	0.45	-0.0
4,614,001	+		HGI48_RS20655	0.45	+1.7
4,614,001	+		HGI48_RS20655	0.45	-0.2
4,614,001	+		HGI48_RS20655	0.45	+0.2
4,614,001	+		HGI48_RS20655	0.45	+0.2
4,614,002	-		HGI48_RS20655	0.46	-2.0
4,614,002	-		HGI48_RS20655	0.46	+0.6
4,614,003	+		HGI48_RS20655	0.46	+0.1
4,614,004	-		HGI48_RS20655	0.46	-0.9
4,614,018	+		HGI48_RS20655	0.47	-0.5
4,614,034	-		HGI48_RS20655	0.48	+1.2
4,614,083	+		HGI48_RS20655	0.52	-0.0
4,614,083	+		HGI48_RS20655	0.52	-0.2
4,614,084	-		HGI48_RS20655	0.53	-0.2
4,614,084	-		HGI48_RS20655	0.53	+1.0
4,614,206	+				-0.0
4,614,206	+		HGI48_RS20655	0.63	-0.5
4,614,206	+		HGI48_RS20655	0.63	+1.0
4,614,207	-		HGI48_RS20655	0.63	+0.5
4,614,207	-		HGI48_RS20655	0.63	-0.2
4,614,207	-				-0.6
4,614,237	-		HGI48_RS20655	0.65	-0.0
4,614,245	-		HGI48_RS20655	0.66	-0.5
4,614,263	-		HGI48_RS20655	0.68	-0.6
4,614,271	+				+1.0
4,614,271	+		HGI48_RS20655	0.68	+0.6
4,614,272	-				+1.5
4,614,272	-		HGI48_RS20655	0.68	+1.0
4,614,272	-		HGI48_RS20655	0.68	-0.3
4,614,272	-				+0.4
4,614,334	+		HGI48_RS20655	0.74	+0.4
4,614,361	+		HGI48_RS20655	0.76	-0.1
4,614,370	+		HGI48_RS20655	0.77	-0.5
4,614,370	+		HGI48_RS20655	0.77	-1.4
4,614,371	-		HGI48_RS20655	0.77	-1.0
4,614,405	+		HGI48_RS20655	0.80	-0.3
4,614,411	+		HGI48_RS20655	0.80	-0.8
4,614,470	-		HGI48_RS20655	0.85	-1.2
4,614,470	-		HGI48_RS20655	0.85	+1.2
4,614,478	+				+1.5
4,614,478	+		HGI48_RS20655	0.86	+0.2
4,614,478	+		HGI48_RS20655	0.86	+0.6
4,614,478	+		HGI48_RS20655	0.86	-0.0
4,614,478	+		HGI48_RS20655	0.86	-0.0
4,614,478	+		HGI48_RS20655	0.86	-1.7
4,614,478	+		HGI48_RS20655	0.86	+0.7
4,614,479	-		HGI48_RS20655	0.86	-0.1
4,614,479	-		HGI48_RS20655	0.86	-0.1
4,614,479	-		HGI48_RS20655	0.86	-0.6
4,614,479	-		HGI48_RS20655	0.86	+1.3
4,614,479	-		HGI48_RS20655	0.86	-2.1
4,614,480	+		HGI48_RS20655	0.86	-0.2
4,614,480	+		HGI48_RS20655	0.86	-1.4
4,614,480	+		HGI48_RS20655	0.86	-0.4
4,614,480	+		HGI48_RS20655	0.86	+0.1
4,614,480	+				+2.0
4,614,480	+		HGI48_RS20655	0.86	-1.6
4,614,480	+		HGI48_RS20655	0.86	+0.4
4,614,480	+		HGI48_RS20655	0.86	-0.0
4,614,480	+		HGI48_RS20655	0.86	+0.4
4,614,481	-		HGI48_RS20655	0.86	-0.5
4,614,481	-		HGI48_RS20655	0.86	-1.4
4,614,481	-		HGI48_RS20655	0.86	-0.2
4,614,481	-		HGI48_RS20655	0.86	-0.5
4,614,481	-		HGI48_RS20655	0.86	+0.2
4,614,481	-		HGI48_RS20655	0.86	+1.1
4,614,481	-		HGI48_RS20655	0.86	+1.1
4,614,481	-		HGI48_RS20655	0.86	+0.2
4,614,481	-		HGI48_RS20655	0.86	-2.2
4,614,526	+				-0.4
4,614,527	-				-0.6
4,614,532	-				-0.2
4,614,532	-				-1.4
4,614,532	-				-3.0
4,614,532	-				-0.4
4,614,532	-				-0.2
4,614,541	-				-0.3
4,614,589	+				-0.7
4,614,636	+				+0.2
4,614,636	+				-0.3
4,614,679	-				-1.6
4,614,892	-				-0.2
4,614,892	-				-0.4
4,614,894	+				+0.7
4,614,895	-				+0.0
4,614,921	+				-1.0
4,614,921	+				-0.2
4,614,922	-				-0.5
4,614,922	-				-0.7
4,614,965	+				+0.4
4,614,965	+				-0.4
4,614,965	+				-0.2
4,614,966	-				+1.0
4,614,966	-				+2.3
4,614,966	-				-0.5
4,614,966	-				+0.5
4,614,966	-				-1.0
4,614,966	-				-0.9
4,614,966	-				-0.3
4,615,129	+				+1.5
4,615,130	-				-0.8
4,615,132	-				-0.5
4,615,132	-				+0.4
4,615,168	+				+0.7
4,615,208	-				+0.0
4,615,275	+				+0.2
4,615,276	-				+1.3
4,615,280	-				+0.2
4,615,284	-				+0.2
4,615,316	-				+1.5
4,615,319	-				-1.0
4,615,353	-				+2.0
4,615,390	-				-0.3
4,615,390	-				-0.6
4,615,390	-				-2.4
4,615,391	+				+2.8
4,615,391	+				+1.0
4,615,392	-				+2.1
4,615,392	-				-1.0
4,615,392	-				-0.0
4,615,398	-				-0.2
4,615,407	+				-1.6
4,615,537	+				+1.5
4,615,538	-				+0.8
4,615,543	+				-0.8