Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18760

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,205,888	+		HGI48_RS18755	0.33	+0.0
4,205,921	+		HGI48_RS18755	0.36	-0.2
4,205,921	+		HGI48_RS18755	0.36	-1.0
4,205,922	-		HGI48_RS18755	0.36	-1.0
4,205,922	-		HGI48_RS18755	0.36	+1.1
4,205,922	-		HGI48_RS18755	0.36	-0.4
4,205,922	-				-0.7
4,205,954	+		HGI48_RS18755	0.38	-0.2
4,205,954	+				-0.2
4,205,954	+		HGI48_RS18755	0.38	+0.2
4,205,954	+		HGI48_RS18755	0.38	-1.3
4,205,954	+		HGI48_RS18755	0.38	+1.4
4,205,954	+		HGI48_RS18755	0.38	-1.3
4,205,954	+		HGI48_RS18755	0.38	+0.4
4,205,954	+		HGI48_RS18755	0.38	+0.5
4,205,955	-		HGI48_RS18755	0.38	-0.3
4,205,955	-		HGI48_RS18755	0.38	-0.2
4,205,955	-		HGI48_RS18755	0.38	-0.6
4,205,955	-		HGI48_RS18755	0.38	+1.3
4,205,955	-		HGI48_RS18755	0.38	-0.5
4,205,955	-		HGI48_RS18755	0.38	-2.0
4,205,955	-		HGI48_RS18755	0.38	-0.5
4,206,041	+		HGI48_RS18755	0.44	-0.4
4,206,041	+		HGI48_RS18755	0.44	+0.7
4,206,041	+		HGI48_RS18755	0.44	+0.3
4,206,041	+		HGI48_RS18755	0.44	+0.7
4,206,041	+		HGI48_RS18755	0.44	+0.3
4,206,041	+		HGI48_RS18755	0.44	-1.7
4,206,041	+		HGI48_RS18755	0.44	-0.0
4,206,042	-		HGI48_RS18755	0.44	-0.3
4,206,042	-		HGI48_RS18755	0.44	-1.5
4,206,042	-		HGI48_RS18755	0.44	-1.0
4,206,042	-		HGI48_RS18755	0.44	-0.5
4,206,042	-		HGI48_RS18755	0.44	-0.4
4,206,042	-		HGI48_RS18755	0.44	+2.0
4,206,083	+		HGI48_RS18755	0.47	-1.2
4,206,083	+		HGI48_RS18755	0.47	+0.4
4,206,083	+		HGI48_RS18755	0.47	+1.6
4,206,084	-		HGI48_RS18755	0.47	+0.1
4,206,084	-		HGI48_RS18755	0.47	-0.5
4,206,084	-		HGI48_RS18755	0.47	+0.1
4,206,084	-		HGI48_RS18755	0.47	+1.3
4,206,084	-		HGI48_RS18755	0.47	-0.5
4,206,084	-		HGI48_RS18755	0.47	-1.5
4,206,084	-		HGI48_RS18755	0.47	+0.5
4,206,084	-		HGI48_RS18755	0.47	+0.7
4,206,147	-		HGI48_RS18755	0.51	+0.5
4,206,147	-				+0.8
4,206,431	+		HGI48_RS18755	0.71	-1.5
4,206,431	+		HGI48_RS18755	0.71	+0.1
4,206,431	+		HGI48_RS18755	0.71	-1.3
4,206,432	-		HGI48_RS18755	0.71	+0.5
4,206,740	+				-0.2
4,206,741	-				-1.2
4,206,777	+				-0.5
4,206,777	+				-0.0
4,206,777	+				-1.2
4,206,778	-				-0.7
4,206,778	-				-1.0
4,206,778	-				-0.2
4,207,031	-		HGI48_RS18760	0.14	-0.2
4,207,031	-		HGI48_RS18760	0.14	+0.8
4,207,031	-		HGI48_RS18760	0.14	-0.5
4,207,031	-		HGI48_RS18760	0.14	+0.8
4,207,031	-		HGI48_RS18760	0.14	-1.3
4,207,031	-		HGI48_RS18760	0.14	-0.1
4,207,123	-		HGI48_RS18760	0.21	-1.2
4,207,231	+		HGI48_RS18760	0.29	+0.1
4,207,231	+		HGI48_RS18760	0.29	+0.4
4,207,231	+		HGI48_RS18760	0.29	-2.0
4,207,232	-		HGI48_RS18760	0.29	+1.1
4,207,235	+		HGI48_RS18760	0.29	-1.2
4,207,235	+		HGI48_RS18760	0.29	-1.7
4,207,235	+		HGI48_RS18760	0.29	-2.0
4,207,235	+		HGI48_RS18760	0.29	-0.4
4,207,235	+		HGI48_RS18760	0.29	+0.0
4,207,235	+		HGI48_RS18760	0.29	-1.2
4,207,236	-		HGI48_RS18760	0.29	+0.4
4,207,236	-		HGI48_RS18760	0.29	+0.1
4,207,236	-		HGI48_RS18760	0.29	-0.4
4,207,236	-		HGI48_RS18760	0.29	-0.2
4,207,236	-		HGI48_RS18760	0.29	-0.6
4,207,236	-		HGI48_RS18760	0.29	-0.2
4,207,236	-		HGI48_RS18760	0.29	-1.0
4,207,236	-		HGI48_RS18760	0.29	+0.8
4,207,377	+		HGI48_RS18760	0.40	+1.3
4,207,377	+		HGI48_RS18760	0.40	-1.3
4,207,377	+		HGI48_RS18760	0.40	-1.2
4,207,378	-		HGI48_RS18760	0.40	-0.2
4,207,378	-		HGI48_RS18760	0.40	-0.4
4,207,558	+		HGI48_RS18760	0.54	+0.4
4,207,559	-				-0.2
4,207,799	+				-0.7
4,207,897	+		HGI48_RS18760	0.80	-0.6
4,207,897	+		HGI48_RS18760	0.80	-1.5
4,207,897	+				+3.3
4,207,898	-				+0.3
4,208,093	-				-0.7
4,208,096	+				-0.6
4,208,097	-				-0.2
4,208,164	+				-0.7
4,208,164	+				+0.1
4,208,183	+				-0.3
4,208,184	-				-1.2
4,208,184	-				-1.7
4,208,184	-				-0.5
4,208,243	-				+0.4
4,208,279	+				-0.4
4,208,279	+				+0.4
4,208,357	+				+0.0
4,208,357	+				-1.7
4,208,358	-				+0.4
4,208,358	-				-2.0
4,208,358	-				+1.5
4,208,384	+				-0.0
4,208,384	+				-0.1
4,208,384	+				+0.4
4,208,385	-				+1.3
4,208,385	-				-0.0
4,208,461	-		HGI48_RS18765	0.13	+0.2
4,208,545	+		HGI48_RS18765	0.22	-1.3
4,208,546	-		HGI48_RS18765	0.23	+0.8
4,208,546	-		HGI48_RS18765	0.23	+0.9
4,208,704	+				+0.3
4,208,793	+		HGI48_RS18765	0.50	-0.4
4,208,793	+				+3.7
4,208,793	+		HGI48_RS18765	0.50	-0.3
4,208,793	+		HGI48_RS18765	0.50	+0.3
4,208,793	+		HGI48_RS18765	0.50	-0.3
4,208,794	-		HGI48_RS18765	0.50	+0.1
4,208,794	-		HGI48_RS18765	0.50	-0.9
4,208,794	-		HGI48_RS18765	0.50	+0.4
4,208,794	-		HGI48_RS18765	0.50	-0.6
4,208,797	+		HGI48_RS18765	0.51	-0.3
4,208,797	+		HGI48_RS18765	0.51	+1.5
4,208,798	-				+2.1
4,208,798	-		HGI48_RS18765	0.51	-1.7
4,208,798	-				+1.4
4,208,798	-		HGI48_RS18765	0.51	+1.7
4,208,813	-		HGI48_RS18765	0.52	+0.3
4,208,813	-		HGI48_RS18765	0.52	-0.0
4,208,828	+		HGI48_RS18765	0.54	+0.3
4,208,829	-		HGI48_RS18765	0.54	-0.3
4,208,854	+		HGI48_RS18765	0.57	+0.4
4,208,855	-				-0.7
4,208,855	-		HGI48_RS18765	0.57	+0.1
4,208,921	-		HGI48_RS18765	0.64	+1.0
4,208,921	-		HGI48_RS18765	0.64	-0.2
4,208,956	+		HGI48_RS18765	0.68	-0.4
4,208,956	+		HGI48_RS18765	0.68	-0.6
4,208,956	+		HGI48_RS18765	0.68	-0.5
4,208,956	+		HGI48_RS18765	0.68	-1.5
4,208,956	+		HGI48_RS18765	0.68	-0.0
4,208,956	+				-0.7
4,208,957	-		HGI48_RS18765	0.68	-0.2
4,208,957	-		HGI48_RS18765	0.68	+0.6
4,208,957	-		HGI48_RS18765	0.68	-0.3
4,208,957	-				+0.3
4,208,957	-		HGI48_RS18765	0.68	-0.2
4,208,957	-		HGI48_RS18765	0.68	-0.0
4,208,957	-		HGI48_RS18765	0.68	-0.5
4,208,957	-		HGI48_RS18765	0.68	-1.7
4,208,957	-		HGI48_RS18765	0.68	+0.4
4,208,957	-		HGI48_RS18765	0.68	-0.2
4,208,957	-				+0.8
4,209,069	+		HGI48_RS18765	0.81	-0.5