Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21705

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
4,843,303	-				+0.3
4,843,303	-				+0.2
4,843,303	-				+0.7
4,843,303	-				+1.0
4,843,303	-				+0.0
4,843,303	-				+1.0
4,843,310	-				+2.2
4,843,427	+		HGI48_RS21700	0.14	-2.9
4,843,428	-		HGI48_RS21700	0.15	-0.9
4,843,466	-		HGI48_RS21700	0.19	-1.0
4,843,505	+		HGI48_RS21700	0.23	+0.2
4,843,505	+		HGI48_RS21700	0.23	-0.6
4,843,505	+		HGI48_RS21700	0.23	+1.0
4,843,506	-		HGI48_RS21700	0.24	-0.7
4,843,506	-		HGI48_RS21700	0.24	-0.3
4,843,506	-		HGI48_RS21700	0.24	-0.3
4,843,506	-		HGI48_RS21700	0.24	-2.4
4,843,506	-		HGI48_RS21700	0.24	-1.6
4,843,506	-		HGI48_RS21700	0.24	-0.5
4,843,506	-		HGI48_RS21700	0.24	-0.7
4,843,506	-		HGI48_RS21700	0.24	+1.7
4,843,506	-		HGI48_RS21700	0.24	+1.2
4,843,531	+		HGI48_RS21700	0.26	-1.0
4,843,532	-		HGI48_RS21700	0.27	+0.7
4,843,609	+		HGI48_RS21700	0.35	-3.0
4,843,610	-				+1.7
4,843,786	+		HGI48_RS21700	0.56	-0.2
4,843,786	+				+1.0
4,843,786	+		HGI48_RS21700	0.56	-0.3
4,843,787	-		HGI48_RS21700	0.56	-0.1
4,843,830	+		HGI48_RS21700	0.61	-2.0
4,843,830	+		HGI48_RS21700	0.61	+1.0
4,843,831	-		HGI48_RS21700	0.61	-1.3
4,843,831	-		HGI48_RS21700	0.61	+0.0
4,843,909	+				+1.6
4,843,910	-		HGI48_RS21700	0.70	-1.2
4,843,910	-		HGI48_RS21700	0.70	-0.3
4,844,156	-				-0.7
4,844,156	-				+0.4
4,844,156	-				-0.3
4,844,156	-				+0.0
4,844,156	-				+0.4
4,844,156	-				+1.4
4,844,158	+				-0.7
4,844,159	-				-0.8
4,844,204	-				+0.0
4,844,204	-				+1.4
4,844,259	+				-0.9
4,844,260	-				+0.7
4,844,260	-				+0.1
4,844,260	-				+1.0
4,844,260	-				-0.3
4,844,260	-				+0.7
4,844,270	+				-0.4
4,844,270	+				-1.3
4,844,270	+				+0.4
4,844,271	-				+0.6
4,844,271	-				+0.2
4,844,271	-				+1.3
4,844,322	+				-0.3
4,844,342	+				-0.6
4,844,343	-				+0.0
4,844,370	+				+1.0
4,844,370	+				-1.3
4,844,371	-				-2.2
4,844,371	-				+2.0
4,844,393	+				+0.3
4,844,460	-				+0.3
4,844,507	+		HGI48_RS21705	0.11	+0.6
4,844,507	+		HGI48_RS21705	0.11	-1.0
4,844,507	+		HGI48_RS21705	0.11	-2.0
4,844,508	-		HGI48_RS21705	0.11	+0.9
4,844,508	-		HGI48_RS21705	0.11	+0.4
4,844,509	+		HGI48_RS21705	0.11	+1.0
4,844,510	-		HGI48_RS21705	0.11	+1.0
4,844,510	-		HGI48_RS21705	0.11	-0.4
4,844,619	+		HGI48_RS21705	0.15	-1.0
4,844,619	+		HGI48_RS21705	0.15	-0.3
4,844,619	+		HGI48_RS21705	0.15	-2.0
4,844,619	+		HGI48_RS21705	0.15	-0.1
4,844,620	-		HGI48_RS21705	0.15	+1.3
4,844,620	-		HGI48_RS21705	0.15	-1.6
4,844,727	-		HGI48_RS21705	0.19	-0.7
4,844,757	+		HGI48_RS21705	0.20	-0.4
4,844,757	+		HGI48_RS21705	0.20	-0.8
4,844,757	+		HGI48_RS21705	0.20	-0.3
4,844,757	+		HGI48_RS21705	0.20	-1.4
4,844,758	-		HGI48_RS21705	0.20	-1.0
4,844,758	-		HGI48_RS21705	0.20	+0.8
4,844,758	-		HGI48_RS21705	0.20	+0.3
4,844,758	-		HGI48_RS21705	0.20	+1.0
4,844,758	-				+0.4
4,844,758	-		HGI48_RS21705	0.20	+1.2
4,844,758	-		HGI48_RS21705	0.20	+0.0
4,844,810	+		HGI48_RS21705	0.22	+0.3
4,844,810	+		HGI48_RS21705	0.22	-1.3
4,844,810	+		HGI48_RS21705	0.22	-1.3
4,844,873	+		HGI48_RS21705	0.24	+0.7
4,844,874	-		HGI48_RS21705	0.24	-2.3
4,844,919	+				+0.4
4,844,919	+		HGI48_RS21705	0.26	+0.0
4,844,919	+		HGI48_RS21705	0.26	-1.6
4,844,919	+		HGI48_RS21705	0.26	-0.4
4,844,920	-		HGI48_RS21705	0.26	-1.0
4,844,973	-		HGI48_RS21705	0.28	+1.0
4,844,973	-		HGI48_RS21705	0.28	+0.0
4,844,981	+		HGI48_RS21705	0.28	-0.3
4,844,982	-				+1.7
4,844,982	-		HGI48_RS21705	0.28	+0.3
4,845,183	+		HGI48_RS21705	0.35	-0.1
4,845,184	-		HGI48_RS21705	0.35	-1.8
4,845,239	+		HGI48_RS21705	0.37	-1.3
4,845,239	+		HGI48_RS21705	0.37	-0.3
4,845,240	-		HGI48_RS21705	0.37	+0.1
4,845,240	-		HGI48_RS21705	0.37	+0.3
4,845,240	-		HGI48_RS21705	0.37	+0.7
4,845,261	+		HGI48_RS21705	0.38	-0.7
4,845,261	+		HGI48_RS21705	0.38	-0.6
4,845,261	+		HGI48_RS21705	0.38	-0.8
4,845,266	+		HGI48_RS21705	0.38	-1.7
4,845,282	+		HGI48_RS21705	0.39	-0.7
4,845,282	+				+1.7
4,845,282	+		HGI48_RS21705	0.39	-0.2
4,845,282	+		HGI48_RS21705	0.39	-1.4
4,845,282	+		HGI48_RS21705	0.39	+0.7
4,845,282	+				+1.0
4,845,282	+		HGI48_RS21705	0.39	-1.2
4,845,283	-		HGI48_RS21705	0.39	+0.0
4,845,303	+		HGI48_RS21705	0.39	+0.0
4,845,303	+		HGI48_RS21705	0.39	+0.7
4,845,304	-		HGI48_RS21705	0.39	+0.6
4,845,314	+		HGI48_RS21705	0.40	+0.4
4,845,336	+				+2.3
4,845,337	-		HGI48_RS21705	0.41	+1.3
4,845,337	-		HGI48_RS21705	0.41	+0.6
4,845,346	+		HGI48_RS21705	0.41	+2.8
4,845,346	+		HGI48_RS21705	0.41	-0.2
4,845,346	+		HGI48_RS21705	0.41	-0.7
4,845,347	-		HGI48_RS21705	0.41	-1.6
4,845,347	-		HGI48_RS21705	0.41	+1.3
4,845,356	+		HGI48_RS21705	0.41	+1.0
4,845,356	+				+0.4
4,845,393	+		HGI48_RS21705	0.43	-0.8
4,845,394	-		HGI48_RS21705	0.43	-0.6
4,845,394	-		HGI48_RS21705	0.43	-2.0
4,845,466	+		HGI48_RS21705	0.45	+0.7
4,845,466	+		HGI48_RS21705	0.45	-0.6
4,845,466	+				+2.8
4,845,466	+		HGI48_RS21705	0.45	+1.0
4,845,467	-		HGI48_RS21705	0.45	+0.0
4,845,467	-		HGI48_RS21705	0.45	+0.6
4,845,467	-		HGI48_RS21705	0.45	-1.3
4,845,472	+		HGI48_RS21705	0.45	-3.4
4,845,472	+		HGI48_RS21705	0.45	-0.2
4,845,472	+		HGI48_RS21705	0.45	+0.0
4,845,472	+		HGI48_RS21705	0.45	-0.3
4,845,473	-		HGI48_RS21705	0.45	-0.6
4,845,473	-		HGI48_RS21705	0.45	+1.3
4,845,473	-		HGI48_RS21705	0.45	-1.2
4,845,473	-		HGI48_RS21705	0.45	+0.2
4,845,498	-		HGI48_RS21705	0.46	+0.6
4,845,510	+		HGI48_RS21705	0.47	+0.5
4,845,510	+		HGI48_RS21705	0.47	+0.1
4,845,510	+				+0.4
4,845,510	+		HGI48_RS21705	0.47	-0.9
4,845,510	+		HGI48_RS21705	0.47	+0.0
4,845,510	+		HGI48_RS21705	0.47	+0.3
4,845,510	+				+0.0
4,845,511	-				+1.4
4,845,511	-		HGI48_RS21705	0.47	-0.8
4,845,511	-		HGI48_RS21705	0.47	+1.4
4,845,511	-		HGI48_RS21705	0.47	+0.3
4,845,511	-		HGI48_RS21705	0.47	-0.3
4,845,511	-		HGI48_RS21705	0.47	-0.0
4,845,516	+		HGI48_RS21705	0.47	-0.6
4,845,516	+		HGI48_RS21705	0.47	-0.2
4,845,551	+		HGI48_RS21705	0.48	+0.9
4,845,551	+		HGI48_RS21705	0.48	-0.3
4,845,560	+		HGI48_RS21705	0.49	+0.3
4,845,601	+		HGI48_RS21705	0.50	+1.3
4,845,627	+		HGI48_RS21705	0.51	-2.2
4,845,627	+				+1.0
4,845,628	-		HGI48_RS21705	0.51	+0.8
4,845,628	-		HGI48_RS21705	0.51	+0.2
4,845,628	-		HGI48_RS21705	0.51	+0.0
4,845,649	+		HGI48_RS21705	0.52	-1.2
4,845,839	+		HGI48_RS21705	0.58	+1.4
4,845,839	+		HGI48_RS21705	0.58	+1.5
4,845,956	+		HGI48_RS21705	0.63	-0.3
4,845,956	+		HGI48_RS21705	0.63	-0.6
4,845,956	+		HGI48_RS21705	0.63	+0.0
4,845,956	+				+0.4
4,845,957	-		HGI48_RS21705	0.63	-0.9
4,845,957	-		HGI48_RS21705	0.63	-0.3
4,845,957	-		HGI48_RS21705	0.63	-0.4
4,845,957	-		HGI48_RS21705	0.63	+0.0
4,845,964	+				+1.0
4,845,965	-		HGI48_RS21705	0.63	-0.7
4,846,000	+		HGI48_RS21705	0.64	-0.5
4,846,000	+		HGI48_RS21705	0.64	-1.0
4,846,000	+		HGI48_RS21705	0.64	-0.8
4,846,001	-		HGI48_RS21705	0.64	+0.8
4,846,001	-				+2.4
4,846,001	-		HGI48_RS21705	0.64	-1.3
4,846,101	-		HGI48_RS21705	0.68	+0.7
4,846,101	-		HGI48_RS21705	0.68	+0.0
4,846,105	+		HGI48_RS21705	0.68	-0.2
4,846,124	-				+0.0
4,846,132	+		HGI48_RS21705	0.69	-1.3
4,846,132	+		HGI48_RS21705	0.69	+0.3
4,846,132	+		HGI48_RS21705	0.69	-1.8
4,846,132	+				+0.0
4,846,132	+		HGI48_RS21705	0.69	-2.2
4,846,132	+		HGI48_RS21705	0.69	+2.5
4,846,133	-		HGI48_RS21705	0.69	-1.8
4,846,133	-		HGI48_RS21705	0.69	-0.3
4,846,133	-		HGI48_RS21705	0.69	-0.4
4,846,133	-		HGI48_RS21705	0.69	+0.0
4,846,229	-		HGI48_RS21705	0.72	+0.0
4,846,240	+		HGI48_RS21705	0.73	-1.3
4,846,240	+		HGI48_RS21705	0.73	+0.7
4,846,240	+		HGI48_RS21705	0.73	-1.3
4,846,240	+		HGI48_RS21705	0.73	-1.8
4,846,240	+		HGI48_RS21705	0.73	-0.1
4,846,240	+		HGI48_RS21705	0.73	-0.2
4,846,240	+		HGI48_RS21705	0.73	-2.0
4,846,240	+		HGI48_RS21705	0.73	+1.8
4,846,240	+		HGI48_RS21705	0.73	-1.1
4,846,241	-		HGI48_RS21705	0.73	-1.0
4,846,241	-		HGI48_RS21705	0.73	+0.9
4,846,241	-		HGI48_RS21705	0.73	-2.8
4,846,241	-		HGI48_RS21705	0.73	-0.4
4,846,241	-				+1.0
4,846,241	-		HGI48_RS21705	0.73	+0.4
4,846,241	-		HGI48_RS21705	0.73	+0.0
4,846,241	-		HGI48_RS21705	0.73	+0.2
4,846,241	-		HGI48_RS21705	0.73	-0.6
4,846,241	-		HGI48_RS21705	0.73	-1.6
4,846,241	-		HGI48_RS21705	0.73	+0.7
4,846,241	-		HGI48_RS21705	0.73	-0.3
4,846,241	-		HGI48_RS21705	0.73	-1.6
4,846,241	-		HGI48_RS21705	0.73	+1.7
4,846,263	-				+2.6
4,846,314	-		HGI48_RS21705	0.75	+0.2
4,846,314	-		HGI48_RS21705	0.75	+0.4
4,846,401	+		HGI48_RS21705	0.79	+0.3
4,846,401	+		HGI48_RS21705	0.79	+0.2
4,846,401	+		HGI48_RS21705	0.79	+1.0
4,846,401	+		HGI48_RS21705	0.79	+0.2
4,846,401	+				+0.0
4,846,401	+		HGI48_RS21705	0.79	-1.0
4,846,402	-		HGI48_RS21705	0.79	-0.3
4,846,402	-		HGI48_RS21705	0.79	+0.0
4,846,402	-		HGI48_RS21705	0.79	-0.6
4,846,402	-		HGI48_RS21705	0.79	+0.0
4,846,402	-		HGI48_RS21705	0.79	+0.5
4,846,402	-		HGI48_RS21705	0.79	-0.3
4,846,418	+		HGI48_RS21705	0.79	-1.3
4,846,418	+		HGI48_RS21705	0.79	+1.0
4,846,419	-				+1.7
4,846,450	-		HGI48_RS21705	0.80	+1.0
4,846,460	+		HGI48_RS21705	0.81	-0.2
4,846,460	+		HGI48_RS21705	0.81	-0.8
4,846,460	+		HGI48_RS21705	0.81	+0.9
4,846,460	+		HGI48_RS21705	0.81	-1.2
4,846,460	+		HGI48_RS21705	0.81	-1.0
4,846,461	-		HGI48_RS21705	0.81	-0.6
4,846,461	-				-0.6
4,846,461	-		HGI48_RS21705	0.81	+0.3
4,846,461	-		HGI48_RS21705	0.81	-1.6
4,846,461	-		HGI48_RS21705	0.81	-1.0
4,846,499	+		HGI48_RS21705	0.82	+0.2
4,846,499	+		HGI48_RS21705	0.82	-0.9
4,846,530	-		HGI48_RS21705	0.83	+0.1
4,846,579	+		HGI48_RS21705	0.85	-1.8
4,846,580	-		HGI48_RS21705	0.85	+0.4
4,846,580	-		HGI48_RS21705	0.85	-1.0
4,846,580	-		HGI48_RS21705	0.85	+0.0
4,846,580	-		HGI48_RS21705	0.85	+0.6
4,846,580	-		HGI48_RS21705	0.85	+0.7
4,846,620	+		HGI48_RS21705	0.86	-1.8
4,846,620	+		HGI48_RS21705	0.86	+1.0
4,846,620	+		HGI48_RS21705	0.86	-1.2
4,846,620	+		HGI48_RS21705	0.86	+0.6
4,846,621	-		HGI48_RS21705	0.86	+0.0
4,846,621	-		HGI48_RS21705	0.86	-0.3
4,846,621	-				+1.6
4,846,621	-		HGI48_RS21705	0.86	-0.1
4,846,621	-		HGI48_RS21705	0.86	+0.4
4,846,657	+		HGI48_RS21705	0.88	-0.2
4,846,657	+		HGI48_RS21705	0.88	+0.5
4,846,658	-		HGI48_RS21705	0.88	+0.6
4,846,658	-		HGI48_RS21705	0.88	+0.9
4,846,658	-		HGI48_RS21705	0.88	+0.1
4,846,658	-		HGI48_RS21705	0.88	-0.1
4,846,658	-		HGI48_RS21705	0.88	-1.7
4,846,658	-		HGI48_RS21705	0.88	+1.4
4,846,658	-		HGI48_RS21705	0.88	-1.6
4,846,662	-		HGI48_RS21705	0.88	-1.4
4,846,662	-		HGI48_RS21705	0.88	+0.6
4,846,662	-		HGI48_RS21705	0.88	-0.5
4,846,662	-		HGI48_RS21705	0.88	+0.0
4,846,677	-		HGI48_RS21705	0.88	-1.0
4,846,677	-		HGI48_RS21705	0.88	-1.3
4,846,678	+		HGI48_RS21705	0.88	+0.7
4,846,678	+		HGI48_RS21705	0.88	-0.2
4,846,678	+		HGI48_RS21705	0.88	+0.1
4,846,679	-		HGI48_RS21705	0.88	-1.3
4,846,679	-		HGI48_RS21705	0.88	-0.2
4,846,679	-		HGI48_RS21705	0.88	-1.0
4,846,679	-				+2.3
4,846,679	-		HGI48_RS21705	0.88	-2.4
4,846,679	-		HGI48_RS21705	0.88	+0.6
4,846,679	-				+1.7
4,846,723	+				+0.0
4,846,723	+				+0.7
4,846,724	-				-0.3
4,846,724	-				+1.5
4,846,724	-				+0.4
4,846,724	-				-0.6
4,846,724	-				-1.0
4,846,724	-				+1.3
4,846,724	-				-0.3
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4,847,745	-				+0.0
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