Experiment: Norland
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS21180 and HGI48_RS21185 are separated by 6 nucleotides HGI48_RS21185 and HGI48_RS21190 overlap by 1 nucleotides HGI48_RS21190 and HGI48_RS21195 are separated by 181 nucleotides
HGI48_RS21180: HGI48_RS21180 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 4,724,724 to 4,726,826
_RS21180
HGI48_RS21185: HGI48_RS21185 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 4,726,833 to 4,727,525
_RS21185
HGI48_RS21190: HGI48_RS21190 - ATP-dependent DNA helicase RecG, at 4,727,525 to 4,729,606
_RS21190
HGI48_RS21195: HGI48_RS21195 - uracil-xanthine permease, at 4,729,788 to 4,731,176
_RS21195
Position (kb) 4727
4728
4729
4730 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 4726.676 kb on + strand at 4726.716 kb on + strand at 4726.717 kb on - strand at 4726.832 kb on + strand at 4726.832 kb on + strand at 4726.832 kb on + strand at 4726.832 kb on + strand at 4726.832 kb on + strand at 4726.833 kb on - strand at 4726.833 kb on - strand at 4726.833 kb on - strand at 4726.833 kb on - strand at 4726.849 kb on - strand at 4726.856 kb on + strand at 4726.856 kb on + strand at 4726.897 kb on + strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.898 kb on - strand at 4726.916 kb on + strand, within HGI48_RS21185 at 4726.916 kb on + strand, within HGI48_RS21185 at 4726.916 kb on + strand at 4726.916 kb on + strand, within HGI48_RS21185 at 4726.916 kb on + strand, within HGI48_RS21185 at 4726.916 kb on + strand at 4726.916 kb on + strand, within HGI48_RS21185 at 4726.917 kb on - strand, within HGI48_RS21185 at 4726.917 kb on - strand, within HGI48_RS21185 at 4726.930 kb on + strand, within HGI48_RS21185 at 4726.930 kb on + strand, within HGI48_RS21185 at 4726.931 kb on - strand, within HGI48_RS21185 at 4726.931 kb on - strand, within HGI48_RS21185 at 4726.931 kb on - strand, within HGI48_RS21185 at 4727.160 kb on + strand at 4727.160 kb on + strand, within HGI48_RS21185 at 4727.160 kb on + strand, within HGI48_RS21185 at 4727.160 kb on + strand at 4727.161 kb on - strand at 4727.161 kb on - strand, within HGI48_RS21185 at 4727.161 kb on - strand, within HGI48_RS21185 at 4727.161 kb on - strand, within HGI48_RS21185 at 4727.172 kb on - strand, within HGI48_RS21185 at 4727.246 kb on + strand, within HGI48_RS21185 at 4727.246 kb on + strand, within HGI48_RS21185 at 4727.246 kb on + strand at 4727.247 kb on - strand, within HGI48_RS21185 at 4727.247 kb on - strand, within HGI48_RS21185 at 4727.247 kb on - strand, within HGI48_RS21185 at 4727.247 kb on - strand, within HGI48_RS21185 at 4727.343 kb on + strand at 4727.343 kb on + strand, within HGI48_RS21185 at 4727.344 kb on - strand, within HGI48_RS21185 at 4727.344 kb on - strand at 4727.344 kb on - strand, within HGI48_RS21185 at 4727.344 kb on - strand, within HGI48_RS21185 at 4727.355 kb on + strand, within HGI48_RS21185 at 4727.355 kb on + strand, within HGI48_RS21185 at 4727.356 kb on - strand, within HGI48_RS21185 at 4727.524 kb on - strand at 4727.545 kb on + strand at 4727.545 kb on + strand at 4727.546 kb on - strand at 4727.631 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.705 kb on + strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.706 kb on - strand at 4727.715 kb on + strand at 4727.716 kb on - strand at 4727.795 kb on - strand, within HGI48_RS21190 at 4727.880 kb on + strand, within HGI48_RS21190 at 4727.880 kb on + strand, within HGI48_RS21190 at 4727.880 kb on + strand, within HGI48_RS21190 at 4728.007 kb on + strand, within HGI48_RS21190 at 4728.172 kb on + strand, within HGI48_RS21190 at 4728.172 kb on + strand, within HGI48_RS21190 at 4728.172 kb on + strand, within HGI48_RS21190 at 4728.173 kb on - strand, within HGI48_RS21190 at 4728.229 kb on + strand, within HGI48_RS21190 at 4728.639 kb on + strand, within HGI48_RS21190 at 4728.640 kb on - strand, within HGI48_RS21190 at 4728.664 kb on + strand at 4728.664 kb on + strand at 4728.664 kb on + strand, within HGI48_RS21190 at 4728.665 kb on - strand at 4728.665 kb on - strand, within HGI48_RS21190 at 4728.842 kb on + strand, within HGI48_RS21190 at 4728.842 kb on + strand, within HGI48_RS21190 at 4728.983 kb on + strand, within HGI48_RS21190 at 4728.983 kb on + strand, within HGI48_RS21190 at 4729.046 kb on + strand, within HGI48_RS21190 at 4729.046 kb on + strand at 4729.047 kb on - strand, within HGI48_RS21190 at 4729.047 kb on - strand, within HGI48_RS21190 at 4729.077 kb on + strand, within HGI48_RS21190 at 4729.078 kb on + strand, within HGI48_RS21190 at 4729.079 kb on - strand, within HGI48_RS21190 at 4729.079 kb on - strand, within HGI48_RS21190 at 4729.079 kb on - strand, within HGI48_RS21190 at 4729.147 kb on + strand, within HGI48_RS21190 at 4729.148 kb on - strand at 4729.148 kb on - strand, within HGI48_RS21190 at 4729.215 kb on + strand, within HGI48_RS21190 at 4729.215 kb on + strand, within HGI48_RS21190 at 4729.216 kb on - strand at 4729.308 kb on + strand, within HGI48_RS21190 at 4729.309 kb on - strand, within HGI48_RS21190 at 4729.309 kb on - strand, within HGI48_RS21190 at 4729.316 kb on + strand, within HGI48_RS21190 at 4729.316 kb on + strand, within HGI48_RS21190 at 4729.316 kb on + strand, within HGI48_RS21190 at 4729.316 kb on + strand, within HGI48_RS21190 at 4729.316 kb on + strand, within HGI48_RS21190 at 4729.594 kb on + strand at 4729.594 kb on + strand at 4729.594 kb on + strand at 4729.594 kb on + strand at 4729.594 kb on + strand at 4729.594 kb on + strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.595 kb on - strand at 4729.656 kb on + strand at 4729.657 kb on - strand at 4729.657 kb on - strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.676 kb on + strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.677 kb on - strand at 4729.679 kb on + strand at 4729.680 kb on - strand at 4729.749 kb on + strand at 4729.749 kb on + strand at 4729.785 kb on - strand at 4729.785 kb on - strand at 4729.785 kb on - strand at 4729.785 kb on - strand at 4729.810 kb on + strand at 4729.810 kb on + strand at 4729.810 kb on + strand at 4729.810 kb on + strand at 4729.811 kb on - strand at 4729.854 kb on + strand at 4729.855 kb on - strand at 4730.117 kb on + strand, within HGI48_RS21195 at 4730.118 kb on - strand, within HGI48_RS21195 at 4730.158 kb on + strand, within HGI48_RS21195 at 4730.159 kb on - strand, within HGI48_RS21195 at 4730.159 kb on - strand, within HGI48_RS21195 at 4730.159 kb on - strand, within HGI48_RS21195 at 4730.159 kb on - strand at 4730.191 kb on + strand, within HGI48_RS21195 at 4730.439 kb on + strand, within HGI48_RS21195 at 4730.440 kb on - strand, within HGI48_RS21195 at 4730.440 kb on - strand, within HGI48_RS21195 at 4730.482 kb on - strand, within HGI48_RS21195 at 4730.565 kb on + strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.566 kb on - strand, within HGI48_RS21195 at 4730.568 kb on + strand, within HGI48_RS21195 at 4730.569 kb on - strand, within HGI48_RS21195 at 4730.569 kb on - strand, within HGI48_RS21195
Per-strain Table
Position Strand Gene LocusTag Fraction Norland remove 4,726,676 + -1.8 4,726,716 + -0.7 4,726,717 - -1.6 4,726,832 + -1.3 4,726,832 + -0.2 4,726,832 + -0.2 4,726,832 + -0.8 4,726,832 + -2.0 4,726,833 - -2.2 4,726,833 - +0.5 4,726,833 - +1.3 4,726,833 - -1.3 4,726,849 - -0.6 4,726,856 + +0.8 4,726,856 + -0.7 4,726,897 + -1.6 4,726,898 - +1.4 4,726,898 - +0.0 4,726,898 - +0.0 4,726,898 - +2.0 4,726,898 - -0.3 4,726,898 - -1.2 4,726,898 - -0.6 4,726,916 + HGI48_RS21185 0.12 -0.1 4,726,916 + HGI48_RS21185 0.12 -1.0 4,726,916 + +2.0 4,726,916 + HGI48_RS21185 0.12 -0.7 4,726,916 + HGI48_RS21185 0.12 -0.3 4,726,916 + +2.4 4,726,916 + HGI48_RS21185 0.12 +0.2 4,726,917 - HGI48_RS21185 0.12 -0.6 4,726,917 - HGI48_RS21185 0.12 +0.6 4,726,930 + HGI48_RS21185 0.14 -1.1 4,726,930 + HGI48_RS21185 0.14 -0.4 4,726,931 - HGI48_RS21185 0.14 +0.0 4,726,931 - HGI48_RS21185 0.14 -1.0 4,726,931 - HGI48_RS21185 0.14 -0.9 4,727,160 + -0.6 4,727,160 + HGI48_RS21185 0.47 -2.3 4,727,160 + HGI48_RS21185 0.47 -0.6 4,727,160 + -0.6 4,727,161 - +2.0 4,727,161 - HGI48_RS21185 0.47 +1.0 4,727,161 - HGI48_RS21185 0.47 +0.0 4,727,161 - HGI48_RS21185 0.47 +0.0 4,727,172 - HGI48_RS21185 0.49 +0.7 4,727,246 + HGI48_RS21185 0.60 -1.8 4,727,246 + HGI48_RS21185 0.60 -1.0 4,727,246 + +2.2 4,727,247 - HGI48_RS21185 0.60 -0.6 4,727,247 - HGI48_RS21185 0.60 +0.4 4,727,247 - HGI48_RS21185 0.60 +0.0 4,727,247 - HGI48_RS21185 0.60 -2.3 4,727,343 + -0.6 4,727,343 + HGI48_RS21185 0.74 -1.3 4,727,344 - HGI48_RS21185 0.74 -1.0 4,727,344 - +0.0 4,727,344 - HGI48_RS21185 0.74 +1.7 4,727,344 - HGI48_RS21185 0.74 -1.0 4,727,355 + HGI48_RS21185 0.75 +2.2 4,727,355 + HGI48_RS21185 0.75 -2.2 4,727,356 - HGI48_RS21185 0.75 +0.0 4,727,524 - +1.0 4,727,545 + -0.2 4,727,545 + +0.0 4,727,546 - -1.8 4,727,631 + -0.2 4,727,705 + +1.4 4,727,705 + -1.0 4,727,705 + +0.1 4,727,705 + -1.3 4,727,705 + -0.2 4,727,705 + +0.0 4,727,705 + +0.3 4,727,705 + -0.9 4,727,705 + -0.6 4,727,705 + +1.0 4,727,705 + -1.3 4,727,705 + -1.8 4,727,705 + -0.6 4,727,705 + -1.0 4,727,705 + -1.6 4,727,706 - -0.6 4,727,706 - -1.2 4,727,706 - -0.6 4,727,706 - +0.0 4,727,706 - -0.4 4,727,706 - +0.0 4,727,706 - +0.0 4,727,706 - +1.0 4,727,706 - +0.4 4,727,706 - +0.4 4,727,706 - +0.4 4,727,706 - -0.3 4,727,706 - -0.7 4,727,706 - -0.2 4,727,706 - -2.7 4,727,706 - -0.8 4,727,715 + -1.0 4,727,716 - -1.0 4,727,795 - HGI48_RS21190 0.13 +0.5 4,727,880 + HGI48_RS21190 0.17 -1.3 4,727,880 + HGI48_RS21190 0.17 -1.8 4,727,880 + HGI48_RS21190 0.17 -0.4 4,728,007 + HGI48_RS21190 0.23 +0.2 4,728,172 + HGI48_RS21190 0.31 -1.6 4,728,172 + HGI48_RS21190 0.31 +1.5 4,728,172 + HGI48_RS21190 0.31 +0.5 4,728,173 - HGI48_RS21190 0.31 +0.8 4,728,229 + HGI48_RS21190 0.34 -2.2 4,728,639 + HGI48_RS21190 0.54 -1.2 4,728,640 - HGI48_RS21190 0.54 -1.7 4,728,664 + +0.4 4,728,664 + +0.4 4,728,664 + HGI48_RS21190 0.55 -0.8 4,728,665 - +1.0 4,728,665 - HGI48_RS21190 0.55 +0.7 4,728,842 + HGI48_RS21190 0.63 -0.4 4,728,842 + HGI48_RS21190 0.63 -0.8 4,728,983 + HGI48_RS21190 0.70 +0.8 4,728,983 + HGI48_RS21190 0.70 +0.6 4,729,046 + HGI48_RS21190 0.73 -1.0 4,729,046 + +2.0 4,729,047 - HGI48_RS21190 0.73 -1.0 4,729,047 - HGI48_RS21190 0.73 +1.7 4,729,077 + HGI48_RS21190 0.75 -1.3 4,729,078 + HGI48_RS21190 0.75 +0.6 4,729,079 - HGI48_RS21190 0.75 -1.4 4,729,079 - HGI48_RS21190 0.75 +0.7 4,729,079 - HGI48_RS21190 0.75 +3.0 4,729,147 + HGI48_RS21190 0.78 -1.6 4,729,148 - +0.0 4,729,148 - HGI48_RS21190 0.78 -0.5 4,729,215 + HGI48_RS21190 0.81 -1.4 4,729,215 + HGI48_RS21190 0.81 -1.3 4,729,216 - +1.4 4,729,308 + HGI48_RS21190 0.86 -1.2 4,729,309 - HGI48_RS21190 0.86 -1.8 4,729,309 - HGI48_RS21190 0.86 +0.3 4,729,316 + HGI48_RS21190 0.86 +1.4 4,729,316 + HGI48_RS21190 0.86 +0.0 4,729,316 + HGI48_RS21190 0.86 +0.2 4,729,316 + HGI48_RS21190 0.86 -2.1 4,729,316 + HGI48_RS21190 0.86 +1.6 4,729,594 + -1.8 4,729,594 + +1.5 4,729,594 + -0.4 4,729,594 + +0.5 4,729,594 + -0.1 4,729,594 + -0.8 4,729,595 - +0.6 4,729,595 - +0.7 4,729,595 - +0.0 4,729,595 - +1.0 4,729,595 - -0.3 4,729,595 - +1.3 4,729,595 - -0.2 4,729,656 + -1.0 4,729,657 - -0.6 4,729,657 - +1.2 4,729,676 + -0.6 4,729,676 + +0.8 4,729,676 + -1.0 4,729,676 + -0.1 4,729,676 + -0.5 4,729,676 + -1.3 4,729,676 + +0.4 4,729,677 - +0.0 4,729,677 - -2.3 4,729,677 - -0.3 4,729,677 - +1.4 4,729,677 - +0.7 4,729,677 - +0.2 4,729,677 - -0.7 4,729,679 + -0.2 4,729,680 - -1.1 4,729,749 + -1.1 4,729,749 + -0.3 4,729,785 - +0.2 4,729,785 - +0.3 4,729,785 - -1.0 4,729,785 - -1.3 4,729,810 + +0.0 4,729,810 + +2.6 4,729,810 + -0.0 4,729,810 + +1.3 4,729,811 - -0.6 4,729,854 + -0.8 4,729,855 - -0.8 4,730,117 + HGI48_RS21195 0.24 -0.3 4,730,118 - HGI48_RS21195 0.24 -0.6 4,730,158 + HGI48_RS21195 0.27 -1.0 4,730,159 - HGI48_RS21195 0.27 -1.3 4,730,159 - HGI48_RS21195 0.27 +1.1 4,730,159 - HGI48_RS21195 0.27 +0.3 4,730,159 - +4.1 4,730,191 + HGI48_RS21195 0.29 +2.2 4,730,439 + HGI48_RS21195 0.47 -2.7 4,730,440 - HGI48_RS21195 0.47 +1.4 4,730,440 - HGI48_RS21195 0.47 -0.8 4,730,482 - HGI48_RS21195 0.50 -1.0 4,730,565 + HGI48_RS21195 0.56 -1.3 4,730,566 - HGI48_RS21195 0.56 -0.4 4,730,566 - HGI48_RS21195 0.56 -1.6 4,730,566 - HGI48_RS21195 0.56 -0.4 4,730,566 - HGI48_RS21195 0.56 -0.5 4,730,566 - HGI48_RS21195 0.56 +0.0 4,730,566 - HGI48_RS21195 0.56 -0.4 4,730,568 + HGI48_RS21195 0.56 -0.6 4,730,569 - HGI48_RS21195 0.56 -1.8 4,730,569 - HGI48_RS21195 0.56 -1.6
Or see this region's nucleotide sequence