Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11950

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,606,479	+				-0.1
2,606,479	+				-1.4
2,606,539	+				+1.2
2,606,540	-				-0.0
2,606,544	+		HGI48_RS11940	0.10	+1.0
2,606,544	+		HGI48_RS11940	0.10	+0.3
2,606,545	-		HGI48_RS11940	0.11	-1.2
2,606,545	-		HGI48_RS11940	0.11	+1.2
2,606,545	-		HGI48_RS11940	0.11	+0.4
2,606,572	+		HGI48_RS11940	0.15	+0.2
2,606,572	+		HGI48_RS11940	0.15	+1.2
2,606,572	+		HGI48_RS11940	0.15	-0.3
2,606,572	+		HGI48_RS11940	0.15	+0.4
2,606,572	+				+2.0
2,606,572	+		HGI48_RS11940	0.15	+0.4
2,606,573	-		HGI48_RS11940	0.15	+0.2
2,606,573	-		HGI48_RS11940	0.15	+0.6
2,606,573	-		HGI48_RS11940	0.15	-1.4
2,606,587	-		HGI48_RS11940	0.18	+0.1
2,606,587	-		HGI48_RS11940	0.18	+0.4
2,606,665	+		HGI48_RS11940	0.31	+0.1
2,606,666	-		HGI48_RS11940	0.31	-0.1
2,606,666	-		HGI48_RS11940	0.31	-0.6
2,606,674	-		HGI48_RS11940	0.32	-1.6
2,606,674	-		HGI48_RS11940	0.32	-0.2
2,606,674	-		HGI48_RS11940	0.32	-1.6
2,606,675	+		HGI48_RS11940	0.32	+0.4
2,606,676	-		HGI48_RS11940	0.33	+0.1
2,606,691	-		HGI48_RS11940	0.35	-0.1
2,606,691	-		HGI48_RS11940	0.35	+2.5
2,606,762	+				-0.2
2,606,763	-		HGI48_RS11940	0.47	-0.6
2,606,763	-				+1.4
2,606,764	+		HGI48_RS11940	0.47	+1.5
2,606,765	-		HGI48_RS11940	0.47	+0.1
2,606,819	+		HGI48_RS11940	0.56	+0.4
2,606,827	+		HGI48_RS11940	0.58	-0.6
2,606,827	+				+3.2
2,606,827	+		HGI48_RS11940	0.58	-0.9
2,606,827	+		HGI48_RS11940	0.58	+1.1
2,606,828	-		HGI48_RS11940	0.58	-0.0
2,606,828	-		HGI48_RS11940	0.58	-2.8
2,606,834	+		HGI48_RS11940	0.59	-0.6
2,606,847	+		HGI48_RS11940	0.61	-0.6
2,606,916	+				-1.2
2,606,943	+		HGI48_RS11940	0.77	+1.7
2,606,943	+		HGI48_RS11940	0.77	+0.7
2,606,943	+		HGI48_RS11940	0.77	-0.9
2,606,943	+		HGI48_RS11940	0.77	-0.7
2,606,944	-		HGI48_RS11940	0.77	+1.0
2,606,944	-		HGI48_RS11940	0.77	-1.4
2,606,944	-		HGI48_RS11940	0.77	-1.9
2,606,945	+		HGI48_RS11940	0.77	+1.3
2,606,947	+		HGI48_RS11940	0.78	-0.0
2,606,948	-		HGI48_RS11940	0.78	-0.3
2,606,957	+		HGI48_RS11940	0.79	-0.2
2,606,957	+		HGI48_RS11940	0.79	-0.9
2,606,957	+				+1.4
2,606,976	-		HGI48_RS11940	0.82	-0.8
2,607,082	+				-2.3
2,607,083	-				+0.4
2,607,093	+				+0.1
2,607,098	+				-1.0
2,607,098	+				-0.6
2,607,099	-				-0.6
2,607,099	-				+0.2
2,607,099	-				-1.2
2,607,099	-				+0.4
2,607,103	-				+0.2
2,607,103	-				-0.6
2,607,122	+				+0.2
2,607,122	+				-0.4
2,607,123	-				-0.4
2,607,212	+		HGI48_RS11945	0.29	-0.0
2,607,213	-		HGI48_RS11945	0.30	-0.3
2,607,281	-		HGI48_RS11945	0.48	-0.0
2,607,326	+		HGI48_RS11945	0.60	-1.6
2,607,345	+		HGI48_RS11945	0.65	+0.9
2,607,345	+		HGI48_RS11945	0.65	+0.7
2,607,346	-		HGI48_RS11945	0.65	+0.4
2,607,346	-		HGI48_RS11945	0.65	-0.6
2,607,503	+		HGI48_RS11950	0.13	-1.6
2,607,586	+		HGI48_RS11950	0.50	-2.9
2,607,597	+		HGI48_RS11950	0.55	-0.6
2,607,597	+		HGI48_RS11950	0.55	-0.0
2,607,597	+		HGI48_RS11950	0.55	+0.2
2,607,598	-		HGI48_RS11950	0.55	-1.0
2,607,686	+				-0.6
2,607,686	+				+0.1
2,607,686	+				-1.5
2,607,729	-				+0.2
2,607,742	-				-1.2
2,607,747	-				+0.1
2,607,747	-				+0.6
2,607,847	+				-0.7
2,607,847	+				-0.6
2,607,847	+				+0.6
2,607,847	+				+1.4
2,607,906	+				+1.0
2,607,906	+				-2.4
2,607,906	+				-0.9
2,607,906	+				+0.4
2,607,906	+				-1.0
2,607,906	+				-0.5
2,607,906	+				-2.2
2,607,906	+				-2.1
2,607,907	-				-1.2
2,607,907	-				+2.0
2,607,907	-				-3.5
2,607,907	-				-0.6
2,607,907	-				+0.4
2,607,946	-				+2.7
2,608,012	+				+0.4
2,608,012	+				+1.4
2,608,012	+				+1.2
2,608,012	+				-0.2
2,608,012	+				-1.9
2,608,012	+				-0.0
2,608,012	+				+1.0
2,608,012	+				-2.2
2,608,013	-				+0.6
2,608,013	-				+0.2
2,608,013	-				-0.0
2,608,070	-				+0.0
2,608,150	+		HGI48_RS11955	0.18	+0.1
2,608,151	-		HGI48_RS11955	0.19	+0.7
2,608,221	+		HGI48_RS11955	0.37	+0.7
2,608,221	+		HGI48_RS11955	0.37	+0.4
2,608,221	+		HGI48_RS11955	0.37	-0.2
2,608,221	+		HGI48_RS11955	0.37	-1.4
2,608,221	+		HGI48_RS11955	0.37	-0.1
2,608,221	+		HGI48_RS11955	0.37	-0.0
2,608,222	-				-0.6
2,608,222	-		HGI48_RS11955	0.37	-0.0
2,608,222	-		HGI48_RS11955	0.37	-2.2
2,608,222	-		HGI48_RS11955	0.37	-1.9
2,608,222	-		HGI48_RS11955	0.37	-0.8
2,608,222	-		HGI48_RS11955	0.37	-0.0
2,608,222	-		HGI48_RS11955	0.37	-0.4
2,608,222	-		HGI48_RS11955	0.37	-0.0
2,608,222	-		HGI48_RS11955	0.37	-0.1
2,608,222	-		HGI48_RS11955	0.37	-0.1
2,608,222	-		HGI48_RS11955	0.37	-2.2
2,608,222	-		HGI48_RS11955	0.37	-0.0
2,608,222	-		HGI48_RS11955	0.37	-1.2
2,608,222	-				+0.8
2,608,225	+		HGI48_RS11955	0.38	-0.3
2,608,225	+		HGI48_RS11955	0.38	-0.0
2,608,225	+		HGI48_RS11955	0.38	-0.8
2,608,225	+		HGI48_RS11955	0.38	-1.0
2,608,225	+		HGI48_RS11955	0.38	-0.3
2,608,225	+		HGI48_RS11955	0.38	+0.7
2,608,226	-		HGI48_RS11955	0.38	-1.6
2,608,226	-		HGI48_RS11955	0.38	-0.6
2,608,226	-		HGI48_RS11955	0.38	-1.0
2,608,226	-		HGI48_RS11955	0.38	+0.1
2,608,226	-		HGI48_RS11955	0.38	-0.4
2,608,226	-				-0.2
2,608,226	-		HGI48_RS11955	0.38	+0.2
2,608,449	+				-0.8
2,608,450	-				-0.6
2,608,477	-				-0.6
2,608,487	+				+0.2
2,608,691	+		HGI48_RS11960	0.18	-0.5
2,608,691	+				+0.4
2,608,691	+		HGI48_RS11960	0.18	+0.4
2,608,692	-		HGI48_RS11960	0.18	+0.7
2,608,692	-				+1.4
2,608,692	-				+1.4