Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11670

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
2,550,071	+		HGI48_RS11665	0.72	-0.2
2,550,072	-		HGI48_RS11665	0.72	+0.4
2,550,327	+				+1.9
2,550,328	-				-0.1
2,550,387	+				+0.4
2,550,396	+				+0.3
2,550,397	-				+1.6
2,550,564	+				+1.7
2,550,565	-				+0.7
2,550,565	-				-2.4
2,550,618	+				-0.5
2,550,648	-				-0.6
2,550,648	-				+1.9
2,550,648	-				+2.9
2,550,648	-				-2.2
2,550,852	+				-0.6
2,550,869	+				+0.1
2,550,869	+				-0.3
2,550,869	+				+0.2
2,550,871	+				-0.1
2,550,871	+				-0.4
2,550,872	-				+1.9
2,550,872	-				-0.6
2,550,872	-				+0.4
2,550,872	-				+0.8
2,550,885	+				+0.8
2,550,902	-				-2.8
2,550,915	+				-0.5
2,551,118	+				-0.2
2,551,118	+				-0.5
2,551,119	-				-2.2
2,551,119	-				-0.4
2,551,119	-				+1.7
2,551,119	-				-1.2
2,551,175	+				+0.4
2,551,175	+				-0.1
2,551,281	-		HGI48_RS11670	0.18	-0.6
2,551,285	-		HGI48_RS11670	0.18	+0.4
2,551,313	+				-1.2
2,551,313	+		HGI48_RS11670	0.20	-0.1
2,551,314	-		HGI48_RS11670	0.20	-1.5
2,551,314	-				+0.9
2,551,323	-				+2.7
2,551,329	+		HGI48_RS11670	0.22	-0.6
2,551,329	+		HGI48_RS11670	0.22	-0.6
2,551,331	+				-1.2
2,551,331	+		HGI48_RS11670	0.22	-1.6
2,551,332	-		HGI48_RS11670	0.22	+0.7
2,551,332	-		HGI48_RS11670	0.22	+0.5
2,551,332	-		HGI48_RS11670	0.22	+0.9
2,551,399	+		HGI48_RS11670	0.27	-0.2
2,551,581	+		HGI48_RS11670	0.41	+1.0
2,551,582	-		HGI48_RS11670	0.41	+1.2
2,551,583	+				-0.2
2,551,583	+		HGI48_RS11670	0.41	+1.2
2,551,583	+		HGI48_RS11670	0.41	-1.1
2,551,583	+		HGI48_RS11670	0.41	-0.5
2,551,584	-		HGI48_RS11670	0.41	-1.6
2,551,584	-		HGI48_RS11670	0.41	+1.9
2,551,584	-		HGI48_RS11670	0.41	-1.8
2,551,584	-		HGI48_RS11670	0.41	+0.4
2,551,584	-		HGI48_RS11670	0.41	-0.1
2,551,584	-		HGI48_RS11670	0.41	-1.6
2,551,584	-				+2.1
2,551,584	-		HGI48_RS11670	0.41	+0.4
2,551,584	-		HGI48_RS11670	0.41	-0.0
2,551,584	-				+0.4
2,551,584	-		HGI48_RS11670	0.41	-1.4
2,551,661	+				+1.1
2,551,671	-		HGI48_RS11670	0.48	+1.5
2,551,671	-		HGI48_RS11670	0.48	+0.4
2,551,671	-		HGI48_RS11670	0.48	+0.2
2,551,671	-		HGI48_RS11670	0.48	-1.2
2,551,724	-		HGI48_RS11670	0.52	-1.0
2,551,774	+		HGI48_RS11670	0.55	-2.6
2,551,808	+		HGI48_RS11670	0.58	-2.2
2,551,808	+		HGI48_RS11670	0.58	-1.6
2,551,808	+		HGI48_RS11670	0.58	-0.4
2,551,808	+		HGI48_RS11670	0.58	+0.7
2,551,809	-		HGI48_RS11670	0.58	-0.2
2,551,809	-		HGI48_RS11670	0.58	+0.0
2,551,809	-				+1.1
2,551,809	-		HGI48_RS11670	0.58	-0.1
2,551,809	-		HGI48_RS11670	0.58	-1.0
2,551,812	-		HGI48_RS11670	0.58	-0.9
2,551,855	-				+0.4
2,551,866	-		HGI48_RS11670	0.62	+0.1
2,551,956	+		HGI48_RS11670	0.69	-1.8
2,551,956	+		HGI48_RS11670	0.69	-0.9
2,551,956	+		HGI48_RS11670	0.69	+1.9
2,551,956	+		HGI48_RS11670	0.69	-1.2
2,552,009	+		HGI48_RS11670	0.73	-0.3
2,552,009	+				-1.2
2,552,009	+		HGI48_RS11670	0.73	-0.6
2,552,009	+				-0.6
2,552,009	+		HGI48_RS11670	0.73	-0.1
2,552,010	-		HGI48_RS11670	0.73	+0.3
2,552,010	-		HGI48_RS11670	0.73	-2.2
2,552,010	-		HGI48_RS11670	0.73	+0.6
2,552,026	-		HGI48_RS11670	0.75	-2.3
2,552,278	+				-0.3
2,552,278	+				-0.2
2,552,278	+				+1.1
2,552,279	-				-0.1
2,552,279	-				-1.4
2,552,279	-				-0.1
2,552,279	-				-1.2
2,552,279	-				-0.6
2,552,279	-				-1.8
2,552,279	-				+0.5
2,552,279	-				+0.5
2,552,350	-				+0.8
2,552,365	-				+0.4
2,552,365	-				-0.3
2,552,402	+				+2.2
2,552,419	+				-0.2
2,552,419	+				+0.8
2,552,419	+				+0.4
2,552,424	+				+0.6
2,552,425	-				+0.9
2,552,436	+				+1.4
2,552,437	-				+0.5
2,552,441	+				+1.1
2,552,442	-				+0.0
2,552,442	-				-0.6
2,552,442	-				+0.2
2,552,442	-				-0.5
2,552,444	+				-1.2
2,552,444	+				-1.0
2,552,445	-				+0.9
2,552,445	-				+1.1
2,552,468	-				+0.2
2,552,485	+				-0.6
2,552,485	+				+0.1
2,552,485	+				+0.6
2,552,485	+				-2.2
2,552,485	+				-0.3
2,552,485	+				-1.5
2,552,485	+				+1.1
2,552,485	+				+0.4
2,552,486	-				-1.1
2,552,486	-				-0.6
2,552,486	-				+1.1
2,552,514	+				-0.9
2,552,515	-				-0.2
2,552,515	-				-2.0
2,552,515	-				-1.2
2,552,515	-				-0.2
2,552,517	+				+1.2
2,552,517	+				-1.0
2,552,517	+				+0.1
2,552,517	+				-2.8
2,552,517	+				+0.2
2,552,517	+				-2.0
2,552,517	+				+0.0
2,552,517	+				+1.4
2,552,517	+				+0.1
2,552,517	+				-1.6
2,552,517	+				-0.4
2,552,517	+				-0.9
2,552,517	+				-1.4
2,552,517	+				+0.3
2,552,517	+				+0.4
2,552,517	+				-0.6
2,552,517	+				-2.0
2,552,518	-				+2.2
2,552,518	-				-0.5
2,552,518	-				-0.1
2,552,518	-				-0.9
2,552,518	-				-1.0
2,552,518	-				-0.0
2,552,518	-				-0.6
2,552,518	-				+1.4
2,552,518	-				+0.3
2,552,539	+				+0.2
2,552,539	+				-0.2
2,552,539	+				-1.2
2,552,540	-				-0.6
2,552,540	-				+1.1
2,552,540	-				-2.0
2,552,768	+		HGI48_RS11675	0.33	+0.7
2,553,154	+				+0.7
2,553,174	+				+0.6
2,553,174	+				-2.6
2,553,174	+				-2.0
2,553,174	+				-1.8
2,553,174	+				+0.4
2,553,174	+				+0.5
2,553,174	+				+0.9
2,553,175	-				-0.6
2,553,175	-				+0.8
2,553,175	-				+0.4
2,553,175	-				-0.1
2,553,175	-				+0.0
2,553,175	-				+0.8
2,553,175	-				-1.2
2,553,203	+				-0.1
2,553,203	+				-0.2
2,553,204	-				+1.4
2,553,204	-				-2.3
2,553,218	-				-0.9
2,553,260	+				-1.4
2,553,260	+				-1.0
2,553,273	-				+0.8
2,553,284	+				+0.2