Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07930

Experiment: Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Norland
1,696,427	+				-1.5
1,696,427	+				-0.5
1,696,427	+				+0.8
1,696,427	+				-1.0
1,696,428	-				-0.7
1,696,428	-				-1.1
1,696,428	-				-2.1
1,696,431	+				-0.3
1,696,431	+				+0.8
1,696,431	+				-0.6
1,696,431	+				-0.5
1,696,432	-				-0.1
1,696,432	-				-2.1
1,696,450	+				+1.5
1,696,543	-				-1.8
1,696,616	-		HGI48_RS07925	0.15	-1.8
1,696,616	-		HGI48_RS07925	0.15	+0.2
1,696,667	+		HGI48_RS07925	0.24	-2.3
1,696,668	-		HGI48_RS07925	0.24	-1.5
1,696,668	-		HGI48_RS07925	0.24	-1.1
1,696,716	+		HGI48_RS07925	0.32	-0.8
1,696,717	-				+1.1
1,696,841	+		HGI48_RS07925	0.52	-0.7
1,696,842	-		HGI48_RS07925	0.52	-1.7
1,696,979	-		HGI48_RS07925	0.74	-0.1
1,697,070	+		HGI48_RS07925	0.89	-1.5
1,697,146	+				-2.1
1,697,147	-				-1.0
1,697,147	-				+0.7
1,697,147	-				+3.6
1,697,147	-				-0.2
1,697,151	-				+0.7
1,697,161	+				+1.5
1,697,162	-				+1.6
1,697,162	-				-2.1
1,697,162	-				-0.1
1,697,162	-				-0.5
1,697,162	-				-0.5
1,697,162	-				+1.7
1,697,181	-				-1.5
1,697,248	+				+0.4
1,697,248	+				-1.1
1,697,260	+				-0.6
1,697,260	+				-0.9
1,697,261	-				-0.5
1,697,261	-				-1.1
1,697,261	-				+0.8
1,697,261	-				+2.1
1,697,261	-				-1.8
1,697,261	-				+0.8
1,697,262	+				+1.8
1,697,262	+				-2.3
1,697,263	-				-1.8
1,697,263	-				-1.1
1,697,267	+				+0.2
1,697,267	+				-0.4
1,697,271	+				+0.2
1,697,271	+				-0.8
1,697,271	+				-0.5
1,697,272	-				+0.1
1,697,272	-				+0.9
1,697,272	-				-0.1
1,697,283	+				+0.2
1,697,284	-				-0.8
1,697,335	+				+0.5
1,697,335	+				+0.0
1,697,336	-				+0.1
1,697,336	-				+0.5
1,697,349	+				-0.9
1,697,350	-				-2.5
1,697,368	+				-0.5
1,697,425	-		HGI48_RS07930	0.11	-2.1
1,697,578	-		HGI48_RS07930	0.21	-2.1
1,697,603	-		HGI48_RS07930	0.23	-1.1
1,697,633	+		HGI48_RS07930	0.25	+0.0
1,697,634	-		HGI48_RS07930	0.25	-1.1
1,697,674	+		HGI48_RS07930	0.28	-1.8
1,697,674	+		HGI48_RS07930	0.28	-0.8
1,697,756	-		HGI48_RS07930	0.33	+0.2
1,697,821	+				+1.5
1,697,821	+		HGI48_RS07930	0.38	-0.7
1,697,821	+		HGI48_RS07930	0.38	-1.5
1,697,821	+		HGI48_RS07930	0.38	-1.7
1,697,821	+		HGI48_RS07930	0.38	+0.3
1,697,821	+		HGI48_RS07930	0.38	+0.4
1,697,821	+		HGI48_RS07930	0.38	+1.2
1,697,822	-		HGI48_RS07930	0.38	+1.3
1,697,822	-		HGI48_RS07930	0.38	+0.1
1,697,822	-		HGI48_RS07930	0.38	-0.7
1,697,822	-		HGI48_RS07930	0.38	-2.1
1,697,822	-		HGI48_RS07930	0.38	-1.1
1,697,914	+		HGI48_RS07930	0.44	-1.1
1,697,914	+		HGI48_RS07930	0.44	-2.1
1,697,915	-		HGI48_RS07930	0.44	-0.3
1,697,915	-		HGI48_RS07930	0.44	-0.5
1,697,946	-		HGI48_RS07930	0.46	-1.5
1,697,946	-		HGI48_RS07930	0.46	-0.2
1,698,013	-		HGI48_RS07930	0.51	-0.7
1,698,199	-		HGI48_RS07930	0.63	+0.1
1,698,220	+		HGI48_RS07930	0.65	+0.6
1,698,220	+				-1.1
1,698,220	+		HGI48_RS07930	0.65	+0.1
1,698,220	+		HGI48_RS07930	0.65	-0.5
1,698,221	-		HGI48_RS07930	0.65	+1.0
1,698,223	+		HGI48_RS07930	0.65	+0.9
1,698,223	+		HGI48_RS07930	0.65	-0.8
1,698,224	-		HGI48_RS07930	0.65	-0.6
1,698,224	-		HGI48_RS07930	0.65	-0.8
1,698,229	-		HGI48_RS07930	0.65	+0.5
1,698,229	-		HGI48_RS07930	0.65	+0.7
1,698,288	+		HGI48_RS07930	0.69	-0.7
1,698,410	-		HGI48_RS07930	0.77	+1.7
1,698,411	+		HGI48_RS07930	0.77	+0.0
1,698,411	+		HGI48_RS07930	0.77	+0.3
1,698,411	+		HGI48_RS07930	0.77	-0.9
1,698,412	-		HGI48_RS07930	0.78	-0.9
1,698,412	-				-0.1
1,698,547	+		HGI48_RS07930	0.87	-0.6
1,698,547	+				-1.1
1,698,564	+		HGI48_RS07930	0.88	-1.1
1,698,572	+		HGI48_RS07930	0.88	+1.7
1,698,573	-		HGI48_RS07930	0.88	+0.1
1,698,578	+		HGI48_RS07930	0.89	+0.5
1,698,579	-		HGI48_RS07930	0.89	+0.2
1,698,579	-		HGI48_RS07930	0.89	-0.1
1,698,579	-		HGI48_RS07930	0.89	-1.5
1,698,579	-		HGI48_RS07930	0.89	-0.1
1,698,597	+				-0.8
1,698,597	+				-1.1
1,698,597	+				+0.8
1,698,755	+				-1.8
1,698,756	-				-1.8
1,698,942	+		HGI48_RS07935	0.12	-1.3
1,698,942	+		HGI48_RS07935	0.12	-1.5
1,698,942	+		HGI48_RS07935	0.12	-0.7
1,698,943	-		HGI48_RS07935	0.12	-1.4
1,698,970	+		HGI48_RS07935	0.14	+0.2
1,698,970	+		HGI48_RS07935	0.14	+0.9
1,698,970	+		HGI48_RS07935	0.14	+0.3
1,698,971	-		HGI48_RS07935	0.14	-0.9
1,698,971	-				-0.1
1,698,974	-		HGI48_RS07935	0.14	-2.1
1,698,991	+		HGI48_RS07935	0.15	-0.7
1,698,992	-		HGI48_RS07935	0.15	-0.2
1,699,049	-		HGI48_RS07935	0.19	-1.0
1,699,122	-				+2.5
1,699,122	-		HGI48_RS07935	0.24	-1.8
1,699,124	+		HGI48_RS07935	0.25	-0.0
1,699,124	+		HGI48_RS07935	0.25	+0.2
1,699,125	-		HGI48_RS07935	0.25	-0.2
1,699,125	-				+1.8
1,699,185	+		HGI48_RS07935	0.29	-1.1
1,699,186	-		HGI48_RS07935	0.29	+0.9
1,699,193	-		HGI48_RS07935	0.30	-1.1
1,699,193	-		HGI48_RS07935	0.30	+0.1
1,699,253	-		HGI48_RS07935	0.34	+1.5
1,699,435	+		HGI48_RS07935	0.47	+0.8
1,699,436	-		HGI48_RS07935	0.47	-2.7
1,699,443	+		HGI48_RS07935	0.47	-0.7
1,699,443	+		HGI48_RS07935	0.47	+1.1
1,699,444	-		HGI48_RS07935	0.47	+0.1
1,699,444	-		HGI48_RS07935	0.47	-0.4
1,699,446	+		HGI48_RS07935	0.47	-0.5
1,699,447	-		HGI48_RS07935	0.48	-0.0
1,699,447	-		HGI48_RS07935	0.48	-1.2
1,699,462	+		HGI48_RS07935	0.49	-0.5
1,699,463	-		HGI48_RS07935	0.49	-0.8
1,699,463	-		HGI48_RS07935	0.49	-2.7
1,699,463	-		HGI48_RS07935	0.49	-1.7
1,699,463	-		HGI48_RS07935	0.49	-0.4
1,699,478	+		HGI48_RS07935	0.50	-0.1
1,699,479	-		HGI48_RS07935	0.50	+2.5
1,699,535	-				+0.5
1,699,606	+		HGI48_RS07935	0.59	-0.2
1,699,677	+		HGI48_RS07935	0.64	-1.3
1,699,678	-		HGI48_RS07935	0.64	+0.0
1,699,678	-		HGI48_RS07935	0.64	-0.8
1,699,718	+		HGI48_RS07935	0.67	-1.5