Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21710

Experiment: Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Atlantic
4,846,229	-		HGI48_RS21705	0.72	+1.0
4,846,240	+		HGI48_RS21705	0.73	-1.2
4,846,240	+		HGI48_RS21705	0.73	+1.1
4,846,240	+		HGI48_RS21705	0.73	-1.2
4,846,240	+		HGI48_RS21705	0.73	-0.7
4,846,240	+		HGI48_RS21705	0.73	-0.0
4,846,240	+		HGI48_RS21705	0.73	-1.7
4,846,240	+		HGI48_RS21705	0.73	-0.3
4,846,240	+		HGI48_RS21705	0.73	+0.7
4,846,240	+		HGI48_RS21705	0.73	-0.7
4,846,241	-		HGI48_RS21705	0.73	-0.9
4,846,241	-		HGI48_RS21705	0.73	-0.0
4,846,241	-		HGI48_RS21705	0.73	+0.8
4,846,241	-		HGI48_RS21705	0.73	+0.1
4,846,241	-				+2.1
4,846,241	-		HGI48_RS21705	0.73	+0.6
4,846,241	-		HGI48_RS21705	0.73	+0.1
4,846,241	-		HGI48_RS21705	0.73	-0.0
4,846,241	-		HGI48_RS21705	0.73	-0.4
4,846,241	-		HGI48_RS21705	0.73	-1.4
4,846,241	-		HGI48_RS21705	0.73	-1.2
4,846,241	-		HGI48_RS21705	0.73	-0.2
4,846,241	-		HGI48_RS21705	0.73	-0.4
4,846,241	-		HGI48_RS21705	0.73	-1.3
4,846,263	-				+1.7
4,846,314	-		HGI48_RS21705	0.75	-1.7
4,846,314	-		HGI48_RS21705	0.75	-0.4
4,846,401	+		HGI48_RS21705	0.79	+0.8
4,846,401	+		HGI48_RS21705	0.79	-0.9
4,846,401	+		HGI48_RS21705	0.79	+0.3
4,846,401	+		HGI48_RS21705	0.79	+0.7
4,846,401	+				+1.1
4,846,401	+		HGI48_RS21705	0.79	-0.9
4,846,402	-		HGI48_RS21705	0.79	+0.8
4,846,402	-		HGI48_RS21705	0.79	-1.4
4,846,402	-		HGI48_RS21705	0.79	-0.4
4,846,402	-		HGI48_RS21705	0.79	+0.7
4,846,402	-		HGI48_RS21705	0.79	-1.7
4,846,402	-		HGI48_RS21705	0.79	+1.1
4,846,418	+		HGI48_RS21705	0.79	+0.4
4,846,418	+		HGI48_RS21705	0.79	+0.4
4,846,419	-				+1.6
4,846,450	-		HGI48_RS21705	0.80	+0.8
4,846,460	+		HGI48_RS21705	0.81	-1.0
4,846,460	+		HGI48_RS21705	0.81	-0.7
4,846,460	+		HGI48_RS21705	0.81	-0.7
4,846,460	+		HGI48_RS21705	0.81	+0.8
4,846,460	+		HGI48_RS21705	0.81	+1.4
4,846,461	-		HGI48_RS21705	0.81	+0.1
4,846,461	-				+2.4
4,846,461	-		HGI48_RS21705	0.81	-1.0
4,846,461	-		HGI48_RS21705	0.81	-1.4
4,846,461	-		HGI48_RS21705	0.81	+2.7
4,846,499	+		HGI48_RS21705	0.82	+0.8
4,846,499	+		HGI48_RS21705	0.82	+0.0
4,846,530	-		HGI48_RS21705	0.83	-0.6
4,846,579	+		HGI48_RS21705	0.85	-0.1
4,846,580	-		HGI48_RS21705	0.85	+0.3
4,846,580	-		HGI48_RS21705	0.85	+0.1
4,846,580	-		HGI48_RS21705	0.85	-0.7
4,846,580	-		HGI48_RS21705	0.85	+1.5
4,846,580	-		HGI48_RS21705	0.85	+0.1
4,846,620	+		HGI48_RS21705	0.86	+0.3
4,846,620	+		HGI48_RS21705	0.86	+1.4
4,846,620	+		HGI48_RS21705	0.86	-0.4
4,846,620	+		HGI48_RS21705	0.86	+1.5
4,846,621	-		HGI48_RS21705	0.86	-0.4
4,846,621	-		HGI48_RS21705	0.86	-0.2
4,846,621	-				+2.1
4,846,621	-		HGI48_RS21705	0.86	+0.1
4,846,621	-		HGI48_RS21705	0.86	+0.1
4,846,657	+		HGI48_RS21705	0.88	-1.7
4,846,657	+		HGI48_RS21705	0.88	+0.8
4,846,658	-		HGI48_RS21705	0.88	+1.3
4,846,658	-		HGI48_RS21705	0.88	-0.1
4,846,658	-		HGI48_RS21705	0.88	+0.0
4,846,658	-		HGI48_RS21705	0.88	-1.8
4,846,658	-		HGI48_RS21705	0.88	-0.3
4,846,658	-		HGI48_RS21705	0.88	-1.0
4,846,658	-		HGI48_RS21705	0.88	-0.4
4,846,662	-		HGI48_RS21705	0.88	-2.3
4,846,662	-		HGI48_RS21705	0.88	-0.5
4,846,662	-		HGI48_RS21705	0.88	-2.7
4,846,662	-		HGI48_RS21705	0.88	-1.9
4,846,677	-		HGI48_RS21705	0.88	+0.1
4,846,677	-		HGI48_RS21705	0.88	-1.2
4,846,678	+		HGI48_RS21705	0.88	+0.4
4,846,678	+		HGI48_RS21705	0.88	-0.2
4,846,678	+		HGI48_RS21705	0.88	+0.5
4,846,679	-		HGI48_RS21705	0.88	-1.2
4,846,679	-		HGI48_RS21705	0.88	+1.0
4,846,679	-		HGI48_RS21705	0.88	-0.9
4,846,679	-				+1.1
4,846,679	-		HGI48_RS21705	0.88	-0.3
4,846,679	-		HGI48_RS21705	0.88	-0.9
4,846,679	-				+1.6
4,846,723	+				-0.9
4,846,723	+				-1.2
4,846,724	-				+0.4
4,846,724	-				-0.7
4,846,724	-				+1.1
4,846,724	-				+0.6
4,846,724	-				-1.4
4,846,724	-				-1.3
4,846,724	-				-2.9
4,846,724	-				+0.1
4,846,730	-				-0.3
4,846,730	-				-0.2
4,846,752	+				+2.9
4,846,752	+				-0.2
4,846,752	+				-2.0
4,846,752	+				+0.1
4,846,753	-				+0.3
4,846,753	-				+0.3
4,846,753	-				+0.7
4,846,753	-				+0.1
4,846,753	-				-0.7
4,846,753	-				-0.4
4,846,825	+				-0.7
4,846,825	+				-0.7
4,846,825	+				-0.2
4,846,825	+				+0.7
4,846,826	-				+0.8
4,846,826	-				+0.3
4,846,826	-				+0.3
4,846,826	-				+0.6
4,846,826	-				+1.1
4,846,826	-				-0.2
4,846,886	+				+0.3
4,846,886	+				+1.1
4,846,886	+				+0.4
4,846,886	+				-0.7
4,846,887	-				-1.4
4,846,887	-				-1.4
4,846,887	-				+0.7
4,846,887	-				-0.4
4,846,889	+				+0.6
4,846,890	-				-0.3
4,846,890	-				-1.2
4,846,890	-				-1.2
4,847,000	+				+2.5
4,847,014	+				+0.0
4,847,014	+				+0.2
4,847,015	-				-0.4
4,847,015	-				+1.6
4,847,033	+				+0.2
4,847,036	+				-0.4
4,847,036	+				+0.1
4,847,036	+				+0.1
4,847,036	+				+2.6
4,847,036	+				+0.8
4,847,037	-				+0.5
4,847,037	-				-1.2
4,847,043	+				-0.9
4,847,043	+				+2.0
4,847,044	-				+1.1
4,847,044	-				+0.3
4,847,046	+				-1.9
4,847,046	+				-0.6
4,847,046	+				-0.4
4,847,046	+				+0.5
4,847,046	+				-0.5
4,847,047	-				-1.7
4,847,048	+				-0.9
4,847,049	-				+1.1
4,847,049	-				+0.3
4,847,068	+				-0.9
4,847,068	+				-1.1
4,847,069	-				-0.1
4,847,069	-				+3.4
4,847,069	-				+0.4
4,847,075	+				-1.2
4,847,075	+				-0.4
4,847,075	+				+0.7
4,847,075	+				-0.4
4,847,075	+				+0.8
4,847,075	+				-1.2
4,847,075	+				+0.5
4,847,075	+				-0.7
4,847,075	+				-1.3
4,847,076	-				+0.1
4,847,076	-				-0.1
4,847,076	-				-0.0
4,847,076	-				+0.1
4,847,076	-				-1.2
4,847,076	-				+0.4
4,847,076	-				+0.7
4,847,076	-				-0.0
4,847,076	-				+0.0
4,847,087	-				+1.6
4,847,113	-				-0.7
4,847,127	+				+1.1
4,847,128	-				+2.1
4,847,128	-				-1.1
4,847,130	+				-1.0
4,847,131	-				-1.4
4,847,137	+				+1.7
4,847,137	+				-1.7
4,847,138	-				+2.9
4,847,147	+				-0.9
4,847,384	+		HGI48_RS21710	0.17	+0.5
4,847,385	-		HGI48_RS21710	0.17	-2.8
4,847,385	-		HGI48_RS21710	0.17	-2.0
4,847,424	+		HGI48_RS21710	0.20	-0.1
4,847,573	+		HGI48_RS21710	0.31	+0.1
4,847,574	-		HGI48_RS21710	0.31	-0.9
4,847,574	-		HGI48_RS21710	0.31	-0.7
4,847,574	-				+2.5
4,847,586	+				-0.4
4,847,610	+		HGI48_RS21710	0.33	+0.6
4,847,610	+		HGI48_RS21710	0.33	-0.9
4,847,615	+		HGI48_RS21710	0.34	-1.1
4,847,745	-		HGI48_RS21710	0.43	-0.9
4,847,745	-				+1.1
4,847,745	-		HGI48_RS21710	0.43	-0.4
4,847,745	-		HGI48_RS21710	0.43	-1.3
4,848,013	+				+1.9
4,848,014	-				+0.1
4,848,169	-				+0.6
4,848,276	+		HGI48_RS21710	0.82	-0.4
4,848,277	-				+1.1
4,848,386	-				-0.9
4,848,583	-				-0.9
4,848,635	-				+0.5
4,848,635	-				+0.6