Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17730

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,975,050	+		HGI48_RS17725	0.42	+0.4
3,975,084	-		HGI48_RS17725	0.46	+0.1
3,975,137	+				+3.3
3,975,207	+		HGI48_RS17725	0.57	+0.7
3,975,390	+				+2.0
3,975,437	+		HGI48_RS17725	0.78	-1.8
3,975,437	+		HGI48_RS17725	0.78	-1.0
3,975,438	-				-0.0
3,975,438	-		HGI48_RS17725	0.78	+1.3
3,975,561	+		HGI48_RS17725	0.89	-1.0
3,975,624	+				+0.7
3,975,625	-				-2.2
3,975,636	+				+0.4
3,975,637	-				-0.6
3,975,709	+				+1.0
3,975,709	+				-1.5
3,975,709	+				+0.1
3,975,709	+				+0.7
3,975,709	+				-0.2
3,975,709	+				-0.4
3,975,709	+				-1.8
3,975,709	+				-1.3
3,975,709	+				-0.3
3,975,709	+				+0.3
3,975,710	-				-1.0
3,975,710	-				+2.0
3,975,710	-				+0.9
3,975,713	+				-1.2
3,975,713	+				+0.3
3,975,713	+				-0.0
3,975,713	+				+1.0
3,975,713	+				+1.0
3,975,714	-				-1.0
3,975,714	-				-0.7
3,975,738	-				+0.1
3,975,912	+				-2.1
3,975,912	+				+1.3
3,975,912	+				+0.2
3,975,912	+				-1.0
3,975,912	+				-1.0
3,975,913	-				+0.6
3,975,913	-				-1.0
3,975,922	+				-0.8
3,975,922	+				-0.6
3,975,922	+				-0.7
3,975,922	+				-1.3
3,975,922	+				+1.7
3,975,922	+				-0.1
3,975,923	-				+0.6
3,975,923	-				+0.4
3,975,923	-				+0.7
3,975,923	-				-1.1
3,975,975	+		HGI48_RS17730	0.12	+2.6
3,975,975	+		HGI48_RS17730	0.12	+0.7
3,975,975	+		HGI48_RS17730	0.12	-1.0
3,976,083	+		HGI48_RS17730	0.16	-0.0
3,976,083	+				+1.6
3,976,083	+		HGI48_RS17730	0.16	-1.6
3,976,083	+		HGI48_RS17730	0.16	-0.6
3,976,200	-		HGI48_RS17730	0.20	+1.0
3,976,434	+		HGI48_RS17730	0.30	+1.0
3,976,434	+		HGI48_RS17730	0.30	+0.6
3,976,434	+		HGI48_RS17730	0.30	-1.3
3,976,435	-		HGI48_RS17730	0.30	-0.8
3,976,455	+		HGI48_RS17730	0.31	-0.4
3,976,519	+		HGI48_RS17730	0.33	+0.2
3,976,575	+		HGI48_RS17730	0.35	+2.5
3,976,575	+		HGI48_RS17730	0.35	+0.2
3,976,616	+		HGI48_RS17730	0.37	+0.5
3,976,639	+		HGI48_RS17730	0.38	-0.0
3,976,639	+		HGI48_RS17730	0.38	+0.1
3,976,639	+		HGI48_RS17730	0.38	+1.0
3,976,640	-		HGI48_RS17730	0.38	-2.0
3,976,728	+		HGI48_RS17730	0.41	+0.7
3,976,728	+		HGI48_RS17730	0.41	-0.0
3,976,729	-		HGI48_RS17730	0.42	-2.0
3,976,729	-		HGI48_RS17730	0.42	-1.0
3,976,731	+		HGI48_RS17730	0.42	+0.6
3,976,732	-		HGI48_RS17730	0.42	+0.0
3,976,878	+		HGI48_RS17730	0.47	+1.4
3,976,878	+		HGI48_RS17730	0.47	+0.1
3,976,878	+		HGI48_RS17730	0.47	+1.0
3,977,206	-		HGI48_RS17730	0.61	+0.2
3,977,206	-		HGI48_RS17730	0.61	-0.4
3,977,206	-		HGI48_RS17730	0.61	+0.8
3,977,251	+		HGI48_RS17730	0.62	+0.2
3,977,252	-		HGI48_RS17730	0.62	+0.4
3,977,252	-		HGI48_RS17730	0.62	-0.3
3,977,266	+		HGI48_RS17730	0.63	-0.4
3,977,281	+		HGI48_RS17730	0.64	-0.2
3,977,281	+		HGI48_RS17730	0.64	-0.0
3,977,281	+		HGI48_RS17730	0.64	-1.8
3,977,281	+				+1.4
3,977,281	+		HGI48_RS17730	0.64	+2.0
3,977,281	+		HGI48_RS17730	0.64	-0.3
3,977,282	-		HGI48_RS17730	0.64	+0.5
3,977,367	+		HGI48_RS17730	0.67	-2.5
3,977,367	+				-0.0
3,977,367	+				+1.4
3,977,367	+		HGI48_RS17730	0.67	-2.7
3,977,367	+		HGI48_RS17730	0.67	+1.3
3,977,368	-				+1.4
3,977,368	-		HGI48_RS17730	0.67	-0.3
3,977,370	+		HGI48_RS17730	0.67	-2.0
3,977,370	+		HGI48_RS17730	0.67	+0.3
3,977,371	-		HGI48_RS17730	0.67	-1.0
3,977,674	-		HGI48_RS17730	0.79	-1.8
3,977,674	-		HGI48_RS17730	0.79	+1.5
3,977,836	+		HGI48_RS17730	0.86	-0.5
3,977,836	+		HGI48_RS17730	0.86	-1.8
3,977,837	-		HGI48_RS17730	0.86	-0.2
3,977,837	-		HGI48_RS17730	0.86	+0.8
3,977,880	+		HGI48_RS17730	0.87	-0.2
3,977,880	+		HGI48_RS17730	0.87	-1.3
3,977,881	-				-0.6
3,977,900	+		HGI48_RS17730	0.88	-0.4
3,977,900	+		HGI48_RS17730	0.88	-1.6
3,977,900	+		HGI48_RS17730	0.88	+0.2
3,977,900	+		HGI48_RS17730	0.88	-1.8
3,977,900	+		HGI48_RS17730	0.88	+0.1
3,977,900	+		HGI48_RS17730	0.88	+0.1
3,977,900	+		HGI48_RS17730	0.88	+0.7
3,977,900	+		HGI48_RS17730	0.88	+1.0
3,977,900	+		HGI48_RS17730	0.88	+0.2
3,977,900	+		HGI48_RS17730	0.88	+0.1
3,977,900	+				+1.0
3,977,901	-		HGI48_RS17730	0.88	-1.7
3,977,901	-		HGI48_RS17730	0.88	-0.3
3,977,901	-		HGI48_RS17730	0.88	-1.7
3,977,901	-		HGI48_RS17730	0.88	+0.6
3,977,971	+				+0.3
3,977,971	+				-0.6
3,977,971	+				+1.8
3,978,073	+				+1.4
3,978,074	-				-1.3
3,978,081	+				-0.0
3,978,085	+				-1.6
3,978,085	+				+1.0
3,978,086	-				-1.3
3,978,086	-				-1.8
3,978,091	+				+1.7
3,978,123	+				-1.0
3,978,123	+				+1.0
3,978,123	+				-1.0
3,978,124	-				+1.4
3,978,124	-				+0.5
3,978,124	-				+1.4
3,978,124	-				-2.6
3,978,342	-				-0.6
3,978,482	+				+1.7
3,978,482	+				-0.2
3,978,556	+				-1.3
3,978,556	+				+0.1
3,978,557	-				-0.8
3,978,558	+				+0.7
3,978,559	-				+0.2
3,978,562	+				-2.0
3,978,563	-				+1.0
3,978,563	-				+1.3
3,978,587	+				+2.6
3,978,588	-				-0.3
3,978,661	-				-2.8
3,978,662	+				-1.3
3,978,662	+				-1.0
3,978,675	-				-0.0
3,978,679	+				-0.0
3,978,679	+				-0.2
3,978,680	-				-0.9
3,978,683	-				-0.3
3,978,683	-				+1.4
3,978,721	+				+0.7
3,978,788	+				-1.0
3,978,788	+				+0.6
3,978,789	-				+1.3
3,978,789	-				-0.8
3,978,789	-				-0.8
3,978,789	-				+1.6
3,978,792	+				-0.3
3,978,792	+				-2.8
3,978,793	-				+1.0
3,978,793	-				+1.0
3,978,793	-				-0.0
3,978,853	+				-1.8
3,978,853	+				+0.4
3,978,855	+				+0.1
3,978,855	+				-2.2
3,978,855	+				-1.3
3,978,855	+				-1.8
3,978,856	+				-0.4
3,978,857	+				-1.2
3,978,857	+				+1.0
3,978,857	+				-0.4
3,978,857	+				-1.2
3,978,857	+				+0.8
3,978,857	+				-1.0
3,978,857	+				+0.0
3,978,857	+				-0.0
3,978,857	+				+1.0
3,978,857	+				-0.2
3,978,857	+				-1.0
3,978,857	+				+0.1
3,978,858	-				-1.6
3,978,858	-				-0.4
3,978,859	+				-1.1
3,978,859	+				-1.3
3,978,859	+				+1.3
3,978,918	+				-0.0
3,978,973	-				-0.6
3,978,980	+				+0.2
3,978,981	-				-0.7
3,979,084	+		HGI48_RS17735	0.16	+0.0
3,979,174	+		HGI48_RS17735	0.22	-0.0
3,979,195	+		HGI48_RS17735	0.24	+0.8
3,979,196	-		HGI48_RS17735	0.24	-0.0