Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11100

Experiment: M9+glycerol

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHGI48_RS11095 and HGI48_RS11100 overlap by 4 nucleotidesHGI48_RS11100 and HGI48_RS11105 overlap by 4 nucleotides HGI48_RS11095: HGI48_RS11095 - exodeoxyribonuclease V subunit alpha, at 2,405,039 to 2,407,084 _RS11095 HGI48_RS11100: HGI48_RS11100 - exodeoxyribonuclease V subunit beta, at 2,407,081 to 2,410,764 _RS11100 HGI48_RS11105: HGI48_RS11105 - exodeoxyribonuclease V subunit gamma, at 2,410,761 to 2,414,237 _RS11105 Position (kb) 2407 2408 2409 2410 2411Strain fitness (log2 ratio) -1 0 1at 2407.059 kb on - strandat 2410.748 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9+glycerol
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2,407,059 - +0.6
2,410,748 - -0.1

Or see this region's nucleotide sequence