Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11035

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,393,657	+				+1.2
2,393,657	+				+0.6
2,393,674	+				-1.7
2,393,674	+				-1.5
2,393,674	+				+0.2
2,393,674	+				+0.2
2,393,674	+				+0.6
2,393,675	-				+0.3
2,393,676	+				-0.1
2,393,676	+				+1.6
2,393,677	-				-2.5
2,393,695	+				+0.0
2,393,696	-				-1.7
2,393,740	+				+1.6
2,393,764	+				-1.4
2,393,789	-				+2.5
2,393,816	+				+0.3
2,393,817	-				+0.3
2,393,862	-				+0.3
2,393,886	+				-0.9
2,393,887	-				+0.6
2,393,986	-				-0.5
2,393,996	-				-1.9
2,394,017	+				-0.7
2,394,041	+				-0.5
2,394,041	+				+0.9
2,394,042	-				+0.3
2,394,045	+				+0.2
2,394,045	+				-0.0
2,394,046	-				-1.6
2,394,046	-				+1.6
2,394,084	+				+0.1
2,394,127	-				+0.4
2,394,127	-				+0.2
2,394,143	-				-1.9
2,394,205	+				+0.2
2,394,208	+				-0.9
2,394,208	+				-0.2
2,394,208	+				+1.1
2,394,224	+				-0.6
2,394,225	-				-0.1
2,394,225	-				-1.0
2,394,227	+				-1.7
2,394,227	+				-0.6
2,394,228	-				-1.4
2,394,276	-				-0.9
2,394,276	-				-0.4
2,394,290	+				-0.0
2,394,290	+				-2.4
2,394,291	-				+0.6
2,394,293	+				+0.2
2,394,294	-				-0.9
2,394,316	-				-0.4
2,394,381	-		HGI48_RS11035	0.14	+0.0
2,394,389	+		HGI48_RS11035	0.15	+0.9
2,394,393	+		HGI48_RS11035	0.16	-0.9
2,394,428	-		HGI48_RS11035	0.22	-0.4
2,394,430	-		HGI48_RS11035	0.22	-1.2
2,394,470	+		HGI48_RS11035	0.29	+1.0
2,394,470	+		HGI48_RS11035	0.29	+2.0
2,394,471	-				+1.1
2,394,471	-		HGI48_RS11035	0.29	+0.9
2,394,471	-		HGI48_RS11035	0.29	-1.9
2,394,477	-		HGI48_RS11035	0.30	-0.4
2,394,477	-		HGI48_RS11035	0.30	-0.7
2,394,477	-		HGI48_RS11035	0.30	+0.3
2,394,477	-		HGI48_RS11035	0.30	-1.6
2,394,535	+		HGI48_RS11035	0.39	-0.2
2,394,536	-		HGI48_RS11035	0.40	-0.4
2,394,536	-		HGI48_RS11035	0.40	-0.8
2,394,542	-		HGI48_RS11035	0.41	-0.7
2,394,542	-		HGI48_RS11035	0.41	-0.4
2,394,551	+				+1.4
2,394,569	+		HGI48_RS11035	0.45	-0.5
2,394,569	+		HGI48_RS11035	0.45	-1.7
2,394,569	+		HGI48_RS11035	0.45	-1.4
2,394,569	+		HGI48_RS11035	0.45	-0.8
2,394,569	+		HGI48_RS11035	0.45	-0.8
2,394,569	+		HGI48_RS11035	0.45	+1.1
2,394,570	-		HGI48_RS11035	0.45	-0.1
2,394,570	-				-0.9
2,394,570	-		HGI48_RS11035	0.45	+1.3
2,394,570	-		HGI48_RS11035	0.45	+1.1
2,394,570	-		HGI48_RS11035	0.45	+0.9
2,394,686	+		HGI48_RS11035	0.64	+1.9
2,394,686	+		HGI48_RS11035	0.64	-0.4
2,394,686	+		HGI48_RS11035	0.64	-0.2
2,394,686	+				+1.1
2,394,686	+		HGI48_RS11035	0.64	-1.3
2,394,687	-		HGI48_RS11035	0.64	+0.1
2,394,687	-		HGI48_RS11035	0.64	-1.5
2,394,687	-		HGI48_RS11035	0.64	-1.5
2,394,687	-		HGI48_RS11035	0.64	+0.3
2,394,690	+		HGI48_RS11035	0.65	-0.4
2,394,690	+		HGI48_RS11035	0.65	-0.4
2,394,690	+		HGI48_RS11035	0.65	-0.1
2,394,690	+				-0.4
2,394,695	+		HGI48_RS11035	0.66	-0.9
2,394,696	-		HGI48_RS11035	0.66	+1.1
2,394,707	+		HGI48_RS11035	0.68	-1.4
2,394,754	-		HGI48_RS11035	0.75	+0.6
2,394,768	+		HGI48_RS11035	0.78	+2.3
2,394,768	+		HGI48_RS11035	0.78	-0.1
2,394,769	-		HGI48_RS11035	0.78	-1.4
2,394,769	-		HGI48_RS11035	0.78	+0.1
2,394,770	+		HGI48_RS11035	0.78	-2.7
2,394,770	+		HGI48_RS11035	0.78	-1.4
2,394,771	-		HGI48_RS11035	0.78	-1.4
2,394,771	-		HGI48_RS11035	0.78	-0.2
2,394,771	-		HGI48_RS11035	0.78	-2.4
2,394,774	+		HGI48_RS11035	0.79	-0.2
2,394,820	+		HGI48_RS11035	0.86	-1.9
2,394,839	-		HGI48_RS11035	0.89	+1.6
2,394,864	+				+1.1
2,394,865	-				-0.1
2,395,066	+				+0.6
2,395,066	+				+1.6
2,395,067	-				-0.5
2,395,110	+				+0.1
2,395,121	+				-0.4
2,395,127	+				+0.1
2,395,127	+				+0.5
2,395,162	-				+0.1
2,395,166	-				-0.4
2,395,226	-				-1.2
2,395,250	+		HGI48_RS11040	0.13	+0.6
2,395,262	+		HGI48_RS11040	0.15	-1.2
2,395,285	+		HGI48_RS11040	0.18	+0.3
2,395,286	-		HGI48_RS11040	0.18	+1.5
2,395,303	+		HGI48_RS11040	0.21	-0.0
2,395,308	-		HGI48_RS11040	0.22	-2.4
2,395,370	+		HGI48_RS11040	0.31	+0.9
2,395,370	+				-0.9
2,395,371	-				+0.6
2,395,371	-		HGI48_RS11040	0.31	-0.2
2,395,382	+		HGI48_RS11040	0.33	-0.4
2,395,382	+		HGI48_RS11040	0.33	+1.1
2,395,382	+		HGI48_RS11040	0.33	-0.8
2,395,383	-		HGI48_RS11040	0.33	-0.2
2,395,502	+		HGI48_RS11040	0.51	+0.1
2,395,502	+		HGI48_RS11040	0.51	+0.1
2,395,503	-		HGI48_RS11040	0.51	-1.5
2,395,503	-		HGI48_RS11040	0.51	-0.9
2,395,532	+		HGI48_RS11040	0.56	+0.4
2,395,552	-		HGI48_RS11040	0.59	-0.5
2,395,586	+		HGI48_RS11040	0.64	-0.4
2,395,609	-		HGI48_RS11040	0.67	-0.0
2,395,612	-		HGI48_RS11040	0.68	-0.9
2,395,612	-		HGI48_RS11040	0.68	-2.2
2,395,667	+		HGI48_RS11040	0.76	-1.4
2,395,667	+		HGI48_RS11040	0.76	-2.2
2,395,667	+		HGI48_RS11040	0.76	-0.5
2,395,667	+		HGI48_RS11040	0.76	+0.4
2,395,668	-		HGI48_RS11040	0.76	-1.7
2,395,668	-		HGI48_RS11040	0.76	-2.5
2,395,668	-		HGI48_RS11040	0.76	-0.1
2,395,668	-		HGI48_RS11040	0.76	-0.0
2,395,670	+		HGI48_RS11040	0.77	+2.0
2,395,671	-				-0.9
2,395,743	+				+0.1
2,395,743	+		HGI48_RS11040	0.88	+0.0
2,395,757	-				-2.5
2,395,802	+				+0.4
2,395,802	+				+0.6
2,395,802	+				-0.4
2,395,802	+				-2.2
2,395,802	+				-0.7
2,395,803	-				-0.2
2,395,803	-				-2.5
2,395,893	+				+1.4
2,395,894	-				-0.2
2,395,894	-				+0.6