Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03740 and HGI48_RS03745 are separated by 164 nucleotides HGI48_RS03745 and HGI48_RS03750 are separated by 56 nucleotides
HGI48_RS03740: HGI48_RS03740 - inositol 2-dehydrogenase, at 796,329 to 797,315
_RS03740
HGI48_RS03745: HGI48_RS03745 - substrate-binding domain-containing protein, at 797,480 to 798,418
_RS03745
HGI48_RS03750: HGI48_RS03750 - sugar ABC transporter ATP-binding protein, at 798,475 to 800,022
_RS03750
Position (kb) 797
798
799 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 796.514 kb on - strand, within HGI48_RS03740 at 796.769 kb on + strand, within HGI48_RS03740 at 796.769 kb on + strand at 796.770 kb on - strand, within HGI48_RS03740 at 796.770 kb on - strand, within HGI48_RS03740 at 796.803 kb on + strand, within HGI48_RS03740 at 796.803 kb on + strand, within HGI48_RS03740 at 796.803 kb on + strand, within HGI48_RS03740 at 796.803 kb on + strand, within HGI48_RS03740 at 796.803 kb on + strand, within HGI48_RS03740 at 796.804 kb on - strand, within HGI48_RS03740 at 796.804 kb on - strand, within HGI48_RS03740 at 797.259 kb on + strand at 797.259 kb on + strand at 797.259 kb on + strand at 797.260 kb on - strand at 797.260 kb on - strand at 797.318 kb on + strand at 797.318 kb on + strand at 797.319 kb on - strand at 797.319 kb on - strand at 797.319 kb on - strand at 797.319 kb on - strand at 797.319 kb on - strand at 797.322 kb on + strand at 797.322 kb on + strand at 797.322 kb on + strand at 797.322 kb on + strand at 797.322 kb on + strand at 797.322 kb on + strand at 797.323 kb on - strand at 797.323 kb on - strand at 797.325 kb on + strand at 797.326 kb on - strand at 797.326 kb on - strand at 797.326 kb on - strand at 797.326 kb on - strand at 797.326 kb on - strand at 797.329 kb on + strand at 797.329 kb on + strand at 797.329 kb on + strand at 797.329 kb on + strand at 797.330 kb on - strand at 797.330 kb on - strand at 797.343 kb on + strand at 797.343 kb on + strand at 797.343 kb on + strand at 797.344 kb on - strand at 797.347 kb on + strand at 797.347 kb on + strand at 797.347 kb on + strand at 797.348 kb on - strand at 797.348 kb on - strand at 797.348 kb on - strand at 797.361 kb on + strand at 797.361 kb on + strand at 797.361 kb on + strand at 797.361 kb on + strand at 797.361 kb on + strand at 797.361 kb on + strand at 797.362 kb on - strand at 797.362 kb on - strand at 797.365 kb on + strand at 797.365 kb on + strand at 797.366 kb on - strand at 797.366 kb on - strand at 797.383 kb on + strand at 797.383 kb on + strand at 797.383 kb on + strand at 797.384 kb on - strand at 797.397 kb on + strand at 797.397 kb on + strand at 797.397 kb on + strand at 797.397 kb on + strand at 797.398 kb on - strand at 797.398 kb on - strand at 797.398 kb on - strand at 797.398 kb on - strand at 797.398 kb on - strand at 797.401 kb on + strand at 797.401 kb on + strand at 797.402 kb on - strand at 797.402 kb on - strand at 797.402 kb on - strand at 797.402 kb on - strand at 797.402 kb on - strand at 797.447 kb on - strand at 797.447 kb on - strand at 797.459 kb on - strand at 797.570 kb on - strand at 797.612 kb on - strand, within HGI48_RS03745 at 797.864 kb on + strand, within HGI48_RS03745 at 797.864 kb on + strand, within HGI48_RS03745 at 797.864 kb on + strand at 797.864 kb on + strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.865 kb on - strand, within HGI48_RS03745 at 797.972 kb on - strand, within HGI48_RS03745 at 797.972 kb on - strand, within HGI48_RS03745 at 797.972 kb on - strand, within HGI48_RS03745 at 797.972 kb on - strand, within HGI48_RS03745 at 798.014 kb on + strand, within HGI48_RS03745 at 798.014 kb on + strand at 798.015 kb on - strand, within HGI48_RS03745 at 798.015 kb on - strand, within HGI48_RS03745 at 798.015 kb on - strand, within HGI48_RS03745 at 798.015 kb on - strand, within HGI48_RS03745 at 798.316 kb on + strand, within HGI48_RS03745 at 798.317 kb on - strand, within HGI48_RS03745 at 798.317 kb on - strand, within HGI48_RS03745 at 798.317 kb on - strand, within HGI48_RS03745 at 798.416 kb on + strand at 798.416 kb on + strand at 798.417 kb on - strand at 798.417 kb on - strand at 798.496 kb on - strand at 798.759 kb on + strand, within HGI48_RS03750 at 798.862 kb on + strand, within HGI48_RS03750 at 798.862 kb on + strand, within HGI48_RS03750 at 798.863 kb on - strand, within HGI48_RS03750 at 798.878 kb on + strand, within HGI48_RS03750 at 798.878 kb on + strand, within HGI48_RS03750 at 798.878 kb on + strand, within HGI48_RS03750 at 798.878 kb on + strand at 798.878 kb on + strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 798.879 kb on - strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.066 kb on + strand, within HGI48_RS03750 at 799.067 kb on - strand, within HGI48_RS03750 at 799.067 kb on - strand, within HGI48_RS03750
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 796,514 - HGI48_RS03740 0.19 -1.1 796,769 + HGI48_RS03740 0.45 -0.4 796,769 + -0.6 796,770 - HGI48_RS03740 0.45 -0.2 796,770 - HGI48_RS03740 0.45 +0.5 796,803 + HGI48_RS03740 0.48 -0.6 796,803 + HGI48_RS03740 0.48 -0.8 796,803 + HGI48_RS03740 0.48 -1.1 796,803 + HGI48_RS03740 0.48 +0.2 796,803 + HGI48_RS03740 0.48 -1.4 796,804 - HGI48_RS03740 0.48 -2.6 796,804 - HGI48_RS03740 0.48 -2.1 797,259 + +1.7 797,259 + +0.1 797,259 + +0.9 797,260 - -0.3 797,260 - +0.6 797,318 + -0.4 797,318 + +0.3 797,319 - +0.4 797,319 - +0.9 797,319 - +1.7 797,319 - +0.5 797,319 - +0.9 797,322 + +0.9 797,322 + -2.1 797,322 + +0.5 797,322 + -0.4 797,322 + +0.5 797,322 + +2.7 797,323 - -1.3 797,323 - -1.6 797,325 + -0.0 797,326 - +1.4 797,326 - +0.4 797,326 - +0.2 797,326 - -0.1 797,326 - +1.4 797,329 + -1.4 797,329 + +1.9 797,329 + -0.1 797,329 + -0.5 797,330 - -0.4 797,330 - +0.9 797,343 + -0.6 797,343 + +0.7 797,343 + +1.7 797,344 - +1.4 797,347 + -0.1 797,347 + -0.1 797,347 + +0.1 797,348 - +0.5 797,348 - +0.5 797,348 - +0.2 797,361 + -1.2 797,361 + -0.3 797,361 + -0.1 797,361 + -0.4 797,361 + -0.2 797,361 + +0.9 797,362 - +0.6 797,362 - -0.4 797,365 + -0.6 797,365 + -0.2 797,366 - -0.1 797,366 - -0.6 797,383 + -1.6 797,383 + -0.8 797,383 + +0.6 797,384 - -2.1 797,397 + -2.8 797,397 + +1.5 797,397 + +2.5 797,397 + +0.5 797,398 - +0.4 797,398 - +0.6 797,398 - -0.6 797,398 - +0.0 797,398 - +1.0 797,401 + -0.6 797,401 + +1.2 797,402 - +0.4 797,402 - +0.2 797,402 - +0.7 797,402 - -1.1 797,402 - -0.6 797,447 - -0.2 797,447 - +0.0 797,459 - +0.1 797,570 - -0.6 797,612 - HGI48_RS03745 0.14 +2.1 797,864 + HGI48_RS03745 0.41 +0.7 797,864 + HGI48_RS03745 0.41 +1.9 797,864 + +1.9 797,864 + HGI48_RS03745 0.41 +0.3 797,865 - HGI48_RS03745 0.41 -0.7 797,865 - HGI48_RS03745 0.41 -1.2 797,865 - HGI48_RS03745 0.41 -1.5 797,865 - HGI48_RS03745 0.41 -1.4 797,865 - HGI48_RS03745 0.41 -0.1 797,865 - HGI48_RS03745 0.41 -2.8 797,972 - HGI48_RS03745 0.52 -3.0 797,972 - HGI48_RS03745 0.52 +1.4 797,972 - HGI48_RS03745 0.52 -0.3 797,972 - HGI48_RS03745 0.52 -0.6 798,014 + HGI48_RS03745 0.57 +0.5 798,014 + +2.4 798,015 - HGI48_RS03745 0.57 -2.4 798,015 - HGI48_RS03745 0.57 +1.7 798,015 - HGI48_RS03745 0.57 +0.1 798,015 - HGI48_RS03745 0.57 -1.9 798,316 + HGI48_RS03745 0.89 +0.3 798,317 - HGI48_RS03745 0.89 -0.1 798,317 - HGI48_RS03745 0.89 +1.1 798,317 - HGI48_RS03745 0.89 -1.9 798,416 + -1.4 798,416 + +0.4 798,417 - -1.1 798,417 - -0.8 798,496 - +0.5 798,759 + HGI48_RS03750 0.18 -1.2 798,862 + HGI48_RS03750 0.25 -1.8 798,862 + HGI48_RS03750 0.25 +1.4 798,863 - HGI48_RS03750 0.25 -1.9 798,878 + HGI48_RS03750 0.26 +0.7 798,878 + HGI48_RS03750 0.26 +1.1 798,878 + HGI48_RS03750 0.26 -0.8 798,878 + -0.6 798,878 + HGI48_RS03750 0.26 -0.6 798,879 - HGI48_RS03750 0.26 +0.7 798,879 - HGI48_RS03750 0.26 +0.1 798,879 - HGI48_RS03750 0.26 -0.4 798,879 - HGI48_RS03750 0.26 +0.6 798,879 - HGI48_RS03750 0.26 -0.4 798,879 - HGI48_RS03750 0.26 -0.6 799,066 + HGI48_RS03750 0.38 -1.1 799,066 + HGI48_RS03750 0.38 +0.2 799,066 + HGI48_RS03750 0.38 -1.1 799,066 + HGI48_RS03750 0.38 -0.3 799,066 + HGI48_RS03750 0.38 +0.1 799,066 + HGI48_RS03750 0.38 -0.6 799,067 - HGI48_RS03750 0.38 +0.4 799,067 - HGI48_RS03750 0.38 -1.1
Or see this region's nucleotide sequence