Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20635

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,607,904	+				+0.5
4,607,904	+				-0.7
4,607,904	+				-0.1
4,607,905	-				+0.0
4,607,905	-				+0.4
4,607,905	-				+1.0
4,607,905	-				-1.5
4,607,928	-				-1.1
4,608,019	+				-0.7
4,608,020	-				-0.1
4,608,077	-				+0.8
4,608,091	-				+1.3
4,608,096	+				-1.1
4,608,106	+				-2.3
4,608,106	+				-1.7
4,608,107	-				+1.3
4,608,107	-				-0.3
4,608,122	+				+1.5
4,608,215	+		HGI48_RS20630	0.14	-1.9
4,608,216	-		HGI48_RS20630	0.14	+0.7
4,608,217	+		HGI48_RS20630	0.14	-2.2
4,608,217	+				-0.3
4,608,217	+		HGI48_RS20630	0.14	-1.1
4,608,217	+		HGI48_RS20630	0.14	-3.1
4,608,217	+		HGI48_RS20630	0.14	+0.1
4,608,218	-		HGI48_RS20630	0.14	-0.2
4,608,218	-		HGI48_RS20630	0.14	+1.7
4,608,284	+		HGI48_RS20630	0.23	-0.6
4,608,284	+		HGI48_RS20630	0.23	-2.6
4,608,285	-		HGI48_RS20630	0.23	+0.7
4,608,285	-		HGI48_RS20630	0.23	+0.8
4,608,443	+		HGI48_RS20630	0.44	+1.3
4,608,444	-		HGI48_RS20630	0.44	-1.1
4,608,444	-		HGI48_RS20630	0.44	-0.3
4,608,539	-		HGI48_RS20630	0.57	-1.5
4,608,893	+				-3.5
4,608,893	+				-0.1
4,608,893	+				+0.0
4,608,894	-				-1.5
4,608,894	-				-1.9
4,608,894	-				-0.3
4,608,894	-				-0.4
4,608,894	-				+1.0
4,608,895	+				-1.2
4,608,895	+				+1.3
4,608,977	-		HGI48_RS20635	0.11	-1.3
4,609,096	+		HGI48_RS20635	0.22	-0.7
4,609,266	+		HGI48_RS20635	0.38	-2.1
4,609,365	+		HGI48_RS20635	0.47	-1.7
4,609,365	+		HGI48_RS20635	0.47	+0.7
4,609,366	-		HGI48_RS20635	0.47	-0.3
4,609,366	-		HGI48_RS20635	0.47	+0.9
4,609,366	-		HGI48_RS20635	0.47	-1.2
4,609,366	-		HGI48_RS20635	0.47	+1.4
4,609,573	+		HGI48_RS20635	0.66	+0.8
4,609,573	+		HGI48_RS20635	0.66	-0.5
4,609,638	+		HGI48_RS20635	0.73	-2.1
4,609,638	+		HGI48_RS20635	0.73	-1.5
4,609,639	-		HGI48_RS20635	0.73	+0.9
4,609,680	+				+2.0
4,609,680	+		HGI48_RS20635	0.76	-1.2
4,609,703	-		HGI48_RS20635	0.79	+0.6
4,609,749	+		HGI48_RS20635	0.83	-0.9
4,609,749	+		HGI48_RS20635	0.83	-0.3
4,609,750	-		HGI48_RS20635	0.83	-0.9
4,609,750	-		HGI48_RS20635	0.83	-1.9
4,609,750	-				+1.7
4,609,750	-				-0.3
4,609,750	-		HGI48_RS20635	0.83	+0.5
4,609,750	-		HGI48_RS20635	0.83	-1.2
4,609,750	-		HGI48_RS20635	0.83	+0.5
4,609,750	-				+2.8
4,609,754	-		HGI48_RS20635	0.83	+0.8
4,609,754	-		HGI48_RS20635	0.83	-0.8
4,609,896	+				-0.4
4,609,896	+				-1.2
4,609,897	-				+1.6
4,609,897	-				+1.3
4,609,922	+				-0.2
4,609,933	+				-1.0
4,609,941	+				-1.1
4,609,942	-				-0.2
4,609,942	-				-1.0
4,609,942	-				-0.7
4,609,942	-				-1.0
4,609,942	-				-0.7
4,609,942	-				-0.1
4,609,942	-				-1.3
4,609,942	-				+0.3
4,609,942	-				-0.7
4,610,142	+		HGI48_RS20640	0.24	-3.1
4,610,142	+		HGI48_RS20640	0.24	+0.6
4,610,142	+				+1.3
4,610,157	+		HGI48_RS20640	0.26	+0.0
4,610,157	+		HGI48_RS20640	0.26	-0.7
4,610,161	+		HGI48_RS20640	0.26	+0.5
4,610,162	-		HGI48_RS20640	0.26	-0.1
4,610,162	-		HGI48_RS20640	0.26	+0.4
4,610,287	+		HGI48_RS20640	0.41	-2.1
4,610,287	+		HGI48_RS20640	0.41	-2.5
4,610,287	+		HGI48_RS20640	0.41	-0.4
4,610,352	+		HGI48_RS20640	0.49	-2.2
4,610,352	+		HGI48_RS20640	0.49	-1.0
4,610,352	+		HGI48_RS20640	0.49	-1.0
4,610,352	+		HGI48_RS20640	0.49	+1.0
4,610,352	+		HGI48_RS20640	0.49	-0.1
4,610,352	+		HGI48_RS20640	0.49	-1.6
4,610,352	+		HGI48_RS20640	0.49	+0.2
4,610,352	+		HGI48_RS20640	0.49	+1.3
4,610,352	+		HGI48_RS20640	0.49	+0.5
4,610,352	+		HGI48_RS20640	0.49	-0.5
4,610,353	-		HGI48_RS20640	0.49	-0.6
4,610,353	-		HGI48_RS20640	0.49	+0.5
4,610,353	-		HGI48_RS20640	0.49	-0.7
4,610,353	-		HGI48_RS20640	0.49	-2.4
4,610,353	-		HGI48_RS20640	0.49	-0.1
4,610,353	-		HGI48_RS20640	0.49	-0.2
4,610,353	-		HGI48_RS20640	0.49	-0.7
4,610,353	-		HGI48_RS20640	0.49	-1.4
4,610,353	-		HGI48_RS20640	0.49	-0.3
4,610,353	-		HGI48_RS20640	0.49	-0.7
4,610,353	-		HGI48_RS20640	0.49	+0.2
4,610,353	-		HGI48_RS20640	0.49	+0.5
4,610,353	-		HGI48_RS20640	0.49	-0.2
4,610,356	+		HGI48_RS20640	0.49	+0.4
4,610,356	+		HGI48_RS20640	0.49	+0.3
4,610,356	+		HGI48_RS20640	0.49	+1.5
4,610,356	+		HGI48_RS20640	0.49	-1.2
4,610,357	-		HGI48_RS20640	0.49	-0.2
4,610,357	-		HGI48_RS20640	0.49	-0.4
4,610,357	-		HGI48_RS20640	0.49	-0.5
4,610,357	-		HGI48_RS20640	0.49	+0.1
4,610,357	-		HGI48_RS20640	0.49	-1.7
4,610,357	-		HGI48_RS20640	0.49	+0.5
4,610,475	+		HGI48_RS20640	0.63	-0.7
4,610,551	+		HGI48_RS20640	0.72	-0.1
4,610,608	+		HGI48_RS20640	0.79	+0.6
4,610,609	-		HGI48_RS20640	0.79	-0.1
4,610,609	-		HGI48_RS20640	0.79	-1.7
4,610,644	+		HGI48_RS20640	0.83	-1.0
4,610,645	-		HGI48_RS20640	0.83	+0.4
4,610,706	+				+0.8
4,610,707	-				-3.0
4,610,759	+				-1.0
4,610,759	+				-1.0
4,610,759	+				-1.3
4,610,759	+				+0.0
4,610,759	+				+1.6
4,610,759	+				-1.7
4,610,759	+				-1.5
4,610,759	+				+0.6
4,610,759	+				-0.4
4,610,759	+				+0.3
4,610,759	+				-1.1
4,610,760	-				-2.2
4,610,760	-				+0.7
4,610,760	-				+0.5
4,610,760	-				-1.1
4,610,760	-				-0.2
4,610,760	-				+0.6
4,610,760	-				-0.8
4,610,761	+				+0.6
4,610,762	-				+0.0
4,610,762	-				-0.2
4,610,807	+				-0.7
4,610,807	+				+1.3
4,610,808	-				-0.5
4,610,811	+				-1.1
4,610,812	-				-1.2
4,610,812	-				+0.6
4,610,812	-				-1.7
4,610,817	+				+1.3
4,610,817	+				+1.3
4,610,817	+				-0.2
4,610,817	+				-0.1
4,610,817	+				-1.1
4,610,817	+				-0.3
4,610,817	+				-2.0
4,610,817	+				-0.2
4,610,818	-				-1.1
4,610,818	-				-1.3
4,610,818	-				+1.3