Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21590

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,816,167	+				-1.2
4,816,368	+		HGI48_RS21585	0.17	+1.1
4,816,369	-		HGI48_RS21585	0.17	+0.5
4,816,369	-		HGI48_RS21585	0.17	-0.7
4,816,401	+		HGI48_RS21585	0.21	+0.3
4,816,402	-		HGI48_RS21585	0.21	+1.3
4,816,450	+		HGI48_RS21585	0.27	-0.3
4,816,450	+		HGI48_RS21585	0.27	+0.5
4,816,450	+		HGI48_RS21585	0.27	-0.5
4,816,451	-				+4.6
4,816,451	-		HGI48_RS21585	0.27	-0.2
4,816,482	-		HGI48_RS21585	0.30	+0.5
4,816,575	+		HGI48_RS21585	0.42	+0.4
4,816,576	-		HGI48_RS21585	0.42	-0.7
4,816,768	+		HGI48_RS21585	0.65	+0.4
4,816,768	+		HGI48_RS21585	0.65	-0.9
4,816,768	+		HGI48_RS21585	0.65	-2.0
4,816,768	+		HGI48_RS21585	0.65	-0.9
4,816,768	+		HGI48_RS21585	0.65	+1.3
4,816,768	+		HGI48_RS21585	0.65	-2.2
4,816,769	-		HGI48_RS21585	0.65	-0.8
4,816,769	-		HGI48_RS21585	0.65	-1.2
4,816,769	-		HGI48_RS21585	0.65	-0.4
4,816,769	-		HGI48_RS21585	0.65	-1.3
4,816,769	-		HGI48_RS21585	0.65	+0.6
4,816,769	-		HGI48_RS21585	0.65	-0.8
4,816,769	-		HGI48_RS21585	0.65	-0.1
4,816,875	+		HGI48_RS21585	0.77	+1.0
4,816,875	+		HGI48_RS21585	0.77	-0.7
4,816,875	+		HGI48_RS21585	0.77	+1.1
4,816,876	-		HGI48_RS21585	0.78	+2.1
4,816,925	-		HGI48_RS21585	0.83	+0.8
4,816,974	+		HGI48_RS21585	0.89	+0.1
4,816,974	+		HGI48_RS21585	0.89	-1.6
4,816,975	-		HGI48_RS21585	0.89	-0.7
4,817,092	+				-3.2
4,817,092	+				-0.9
4,817,093	-				-0.3
4,817,093	-				+0.9
4,817,093	-				+0.9
4,817,100	+				+0.1
4,817,151	+				-0.5
4,817,151	+				-1.2
4,817,151	+				+1.5
4,817,151	+				+0.1
4,817,151	+				-1.2
4,817,152	-				-0.9
4,817,152	-				-1.7
4,817,170	-				-1.6
4,817,209	+				+0.7
4,817,210	-				+1.6
4,817,319	+		HGI48_RS21590	0.22	+1.8
4,817,351	-				-0.5
4,817,402	-		HGI48_RS21590	0.33	-0.2
4,817,531	-				+0.1
4,817,545	-				-0.5
4,817,596	+		HGI48_RS21590	0.59	-0.7
4,817,641	+		HGI48_RS21590	0.65	-1.0
4,817,642	-		HGI48_RS21590	0.66	-1.7
4,817,642	-		HGI48_RS21590	0.66	-0.7
4,817,695	+		HGI48_RS21590	0.73	+0.5
4,817,695	+		HGI48_RS21590	0.73	+0.1
4,817,695	+		HGI48_RS21590	0.73	+0.8
4,817,696	-		HGI48_RS21590	0.73	-0.9
4,817,696	-		HGI48_RS21590	0.73	+1.5
4,817,696	-		HGI48_RS21590	0.73	-0.9
4,817,696	-		HGI48_RS21590	0.73	-0.9
4,817,709	+		HGI48_RS21590	0.75	-1.5
4,817,755	+		HGI48_RS21590	0.81	-1.0
4,817,756	-		HGI48_RS21590	0.81	-0.5
4,817,819	+		HGI48_RS21590	0.89	+0.1
4,817,819	+		HGI48_RS21590	0.89	-1.7
4,817,819	+		HGI48_RS21590	0.89	-0.5
4,817,819	+		HGI48_RS21590	0.89	-0.9
4,817,819	+		HGI48_RS21590	0.89	-2.2
4,817,819	+		HGI48_RS21590	0.89	+0.1
4,817,819	+		HGI48_RS21590	0.89	-1.3
4,817,819	+				+1.5
4,817,820	-		HGI48_RS21590	0.89	-0.7
4,817,820	-		HGI48_RS21590	0.89	-1.5
4,817,820	-				+0.5
4,817,824	+				+0.9
4,817,824	+				+0.1
4,817,824	+				-1.2
4,817,824	+				-2.2
4,817,824	+				-3.0
4,817,824	+				+1.5
4,817,824	+				+0.1
4,817,824	+				-1.7
4,817,824	+				+0.2
4,817,824	+				-1.2
4,817,824	+				-0.1
4,817,824	+				-1.3
4,817,824	+				-0.5
4,817,825	-				+0.1
4,817,825	-				-1.4
4,817,825	-				-1.6
4,817,825	-				+0.0
4,817,825	-				+1.1
4,817,825	-				-0.9
4,817,825	-				+0.1
4,817,825	-				+0.1
4,817,825	-				-0.1
4,817,825	-				-0.4
4,817,825	-				+0.3
4,817,825	-				-0.5
4,817,825	-				+2.4
4,817,825	-				-0.2
4,817,825	-				+0.4
4,817,825	-				+0.3
4,817,825	-				+0.7
4,817,825	-				+0.1
4,817,826	+				-0.5
4,817,929	+				+0.9
4,817,929	+				+1.7
4,817,929	+				-2.2
4,817,930	-				+0.6
4,817,933	+				-2.0
4,817,934	-				-0.0
4,818,000	+		HGI48_RS21595	0.13	-0.0
4,818,001	-		HGI48_RS21595	0.13	+2.1
4,818,001	-		HGI48_RS21595	0.13	+1.3
4,818,143	+		HGI48_RS21595	0.32	+2.8
4,818,143	+		HGI48_RS21595	0.32	+0.7
4,818,143	+		HGI48_RS21595	0.32	-1.1
4,818,143	+				+1.5
4,818,143	+		HGI48_RS21595	0.32	+0.7
4,818,143	+		HGI48_RS21595	0.32	-1.5
4,818,144	-				+1.5
4,818,144	-		HGI48_RS21595	0.32	-2.6
4,818,144	-		HGI48_RS21595	0.32	+0.6
4,818,144	-		HGI48_RS21595	0.32	+0.7
4,818,144	-		HGI48_RS21595	0.32	+1.1
4,818,144	-		HGI48_RS21595	0.32	+0.4
4,818,326	+		HGI48_RS21595	0.56	-1.0
4,818,326	+		HGI48_RS21595	0.56	-1.7
4,818,327	-		HGI48_RS21595	0.56	-0.6
4,818,327	-		HGI48_RS21595	0.56	-0.8
4,818,327	-		HGI48_RS21595	0.56	+0.1
4,818,327	-		HGI48_RS21595	0.56	-1.5
4,818,394	+		HGI48_RS21595	0.65	-0.1
4,818,401	-		HGI48_RS21595	0.66	-0.1
4,818,413	+		HGI48_RS21595	0.68	-1.2
4,818,413	+				+0.1
4,818,413	+		HGI48_RS21595	0.68	-1.0
4,818,413	+		HGI48_RS21595	0.68	-1.5
4,818,413	+		HGI48_RS21595	0.68	-2.8
4,818,413	+		HGI48_RS21595	0.68	+1.3
4,818,413	+		HGI48_RS21595	0.68	-1.0
4,818,413	+		HGI48_RS21595	0.68	+1.9
4,818,413	+		HGI48_RS21595	0.68	-0.4
4,818,414	-		HGI48_RS21595	0.68	+0.1
4,818,414	-		HGI48_RS21595	0.68	+1.3
4,818,414	-		HGI48_RS21595	0.68	-2.2
4,818,414	-		HGI48_RS21595	0.68	+0.4
4,818,415	+		HGI48_RS21595	0.68	-0.5
4,818,415	+		HGI48_RS21595	0.68	-0.6
4,818,416	-		HGI48_RS21595	0.68	+1.5
4,818,416	-		HGI48_RS21595	0.68	-0.7
4,818,416	-		HGI48_RS21595	0.68	-0.4
4,818,416	-		HGI48_RS21595	0.68	-2.5
4,818,416	-		HGI48_RS21595	0.68	+0.5
4,818,416	-		HGI48_RS21595	0.68	+0.3
4,818,477	-		HGI48_RS21595	0.76	+0.5
4,818,499	+		HGI48_RS21595	0.79	-1.2
4,818,512	+		HGI48_RS21595	0.81	+0.3
4,818,513	-		HGI48_RS21595	0.81	+1.3
4,818,513	-		HGI48_RS21595	0.81	-0.2
4,818,517	+		HGI48_RS21595	0.81	+1.7
4,818,517	+		HGI48_RS21595	0.81	+0.2
4,818,518	-		HGI48_RS21595	0.81	-0.5
4,818,601	-				-0.5
4,818,758	+				+2.7
4,818,758	+				-0.5
4,818,758	+		HGI48_RS21600	0.14	-0.1
4,818,758	+		HGI48_RS21600	0.14	+0.9
4,818,758	+		HGI48_RS21600	0.14	-0.9
4,818,758	+		HGI48_RS21600	0.14	+0.5
4,818,758	+		HGI48_RS21600	0.14	+1.4
4,818,758	+		HGI48_RS21600	0.14	-1.2
4,818,758	+		HGI48_RS21600	0.14	-1.6
4,818,758	+		HGI48_RS21600	0.14	-1.9
4,818,758	+		HGI48_RS21600	0.14	-0.9
4,818,759	-		HGI48_RS21600	0.14	+0.8
4,818,759	-		HGI48_RS21600	0.14	-0.9
4,818,759	-		HGI48_RS21600	0.14	+0.3
4,818,759	-		HGI48_RS21600	0.14	-2.0
4,818,759	-		HGI48_RS21600	0.14	-2.2
4,818,759	-		HGI48_RS21600	0.14	-0.5
4,818,759	-		HGI48_RS21600	0.14	-1.7
4,818,778	+		HGI48_RS21600	0.17	-0.0
4,818,778	+		HGI48_RS21600	0.17	-1.2
4,818,778	+		HGI48_RS21600	0.17	-2.0
4,818,779	-		HGI48_RS21600	0.17	-1.0
4,818,779	-				+1.9