Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19610

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,376,259	+		HGI48_RS19605	0.15	-0.7
4,376,259	+		HGI48_RS19605	0.15	-0.8
4,376,259	+		HGI48_RS19605	0.15	-0.5
4,376,260	-		HGI48_RS19605	0.15	-0.9
4,376,260	-		HGI48_RS19605	0.15	-1.0
4,376,260	-		HGI48_RS19605	0.15	+0.5
4,376,260	-		HGI48_RS19605	0.15	-1.8
4,376,260	-		HGI48_RS19605	0.15	-0.9
4,376,328	+		HGI48_RS19605	0.21	-0.1
4,376,329	-		HGI48_RS19605	0.21	-0.8
4,376,329	-		HGI48_RS19605	0.21	-0.7
4,376,358	+				-0.5
4,376,358	+		HGI48_RS19605	0.23	+1.0
4,376,359	-		HGI48_RS19605	0.23	-1.2
4,376,359	-		HGI48_RS19605	0.23	+1.0
4,376,359	-		HGI48_RS19605	0.23	-0.4
4,376,359	-		HGI48_RS19605	0.23	-1.2
4,376,391	+		HGI48_RS19605	0.26	-0.5
4,376,391	+		HGI48_RS19605	0.26	-0.7
4,376,392	-		HGI48_RS19605	0.26	+0.9
4,376,411	+		HGI48_RS19605	0.28	-0.1
4,376,574	+		HGI48_RS19605	0.42	+0.9
4,376,574	+		HGI48_RS19605	0.42	-2.2
4,376,574	+		HGI48_RS19605	0.42	-1.9
4,376,574	+		HGI48_RS19605	0.42	-0.9
4,376,958	+		HGI48_RS19605	0.76	+0.9
4,377,002	+				+1.5
4,377,002	+		HGI48_RS19605	0.80	+0.7
4,377,003	-		HGI48_RS19605	0.80	+1.1
4,377,085	+		HGI48_RS19605	0.87	-1.3
4,377,086	-		HGI48_RS19605	0.87	+1.0
4,377,154	+				+0.6
4,377,162	+				-1.2
4,377,162	+				-2.2
4,377,162	+				+3.0
4,377,162	+				-1.7
4,377,162	+				-0.9
4,377,162	+				+1.0
4,377,162	+				-1.5
4,377,163	-				+0.1
4,377,163	-				+0.1
4,377,163	-				-1.4
4,377,163	-				-0.2
4,377,163	-				+0.5
4,377,235	+				+1.3
4,377,235	+				-0.2
4,377,252	+				-0.5
4,377,252	+				+0.1
4,377,252	+				+2.1
4,377,252	+				+0.5
4,377,252	+				+0.9
4,377,252	+				+0.5
4,377,253	-				-2.8
4,377,253	-				-1.0
4,377,253	-				+1.5
4,377,253	-				+1.1
4,377,689	+		HGI48_RS19610	0.35	-1.7
4,377,690	-				+2.9
4,377,690	-		HGI48_RS19610	0.36	-0.5
4,377,690	-		HGI48_RS19610	0.36	+0.1
4,377,749	+				+1.1
4,377,749	+		HGI48_RS19610	0.40	-1.3
4,377,749	+		HGI48_RS19610	0.40	-0.4
4,377,749	+		HGI48_RS19610	0.40	-0.3
4,377,749	+		HGI48_RS19610	0.40	+0.8
4,377,750	-		HGI48_RS19610	0.40	+1.6
4,377,750	-		HGI48_RS19610	0.40	+0.5
4,377,797	+		HGI48_RS19610	0.44	-0.9
4,377,797	+		HGI48_RS19610	0.44	-0.9
4,377,798	-		HGI48_RS19610	0.44	+1.0
4,377,798	-				+0.1
4,377,824	-		HGI48_RS19610	0.46	-0.5
4,377,917	-		HGI48_RS19610	0.53	-0.7
4,377,917	-		HGI48_RS19610	0.53	+1.1
4,377,944	+		HGI48_RS19610	0.55	-0.1
4,377,945	-				-0.5
4,377,945	-		HGI48_RS19610	0.55	-0.9
4,377,977	-		HGI48_RS19610	0.58	+0.3
4,377,977	-		HGI48_RS19610	0.58	+0.7
4,378,004	+		HGI48_RS19610	0.60	-1.3
4,378,118	+		HGI48_RS19610	0.69	-0.1
4,378,118	+		HGI48_RS19610	0.69	+0.1
4,378,118	+		HGI48_RS19610	0.69	-2.1
4,378,118	+		HGI48_RS19610	0.69	+0.5
4,378,118	+		HGI48_RS19610	0.69	+0.8
4,378,118	+				+0.5
4,378,119	-		HGI48_RS19610	0.69	+0.5
4,378,119	-		HGI48_RS19610	0.69	-0.5
4,378,119	-		HGI48_RS19610	0.69	-0.3
4,378,119	-		HGI48_RS19610	0.69	+0.1
4,378,227	+		HGI48_RS19610	0.77	+0.6
4,378,228	-		HGI48_RS19610	0.77	-1.0
4,378,229	+		HGI48_RS19610	0.77	-1.7
4,378,229	+		HGI48_RS19610	0.77	-1.7
4,378,229	+		HGI48_RS19610	0.77	-0.9
4,378,229	+		HGI48_RS19610	0.77	-2.5
4,378,229	+				+1.1
4,378,229	+		HGI48_RS19610	0.77	-0.4
4,378,229	+		HGI48_RS19610	0.77	+0.4
4,378,229	+		HGI48_RS19610	0.77	-1.2
4,378,229	+				+0.1
4,378,229	+		HGI48_RS19610	0.77	-0.9
4,378,229	+		HGI48_RS19610	0.77	-1.5
4,378,229	+		HGI48_RS19610	0.77	-2.1
4,378,229	+		HGI48_RS19610	0.77	-2.1
4,378,229	+		HGI48_RS19610	0.77	+1.4
4,378,229	+		HGI48_RS19610	0.77	-2.1
4,378,229	+		HGI48_RS19610	0.77	-0.7
4,378,229	+		HGI48_RS19610	0.77	+1.5
4,378,229	+		HGI48_RS19610	0.77	-0.5
4,378,230	-		HGI48_RS19610	0.77	+0.4
4,378,230	-				-0.5
4,378,230	-		HGI48_RS19610	0.77	+1.7
4,378,230	-		HGI48_RS19610	0.77	-0.9
4,378,230	-		HGI48_RS19610	0.77	-0.1
4,378,230	-		HGI48_RS19610	0.77	-1.5
4,378,230	-		HGI48_RS19610	0.77	+1.6
4,378,230	-				-0.5
4,378,230	-		HGI48_RS19610	0.77	-0.1
4,378,230	-				-0.5
4,378,235	+		HGI48_RS19610	0.78	-1.7
4,378,236	-		HGI48_RS19610	0.78	+0.3
4,378,236	-		HGI48_RS19610	0.78	+0.4
4,378,236	-		HGI48_RS19610	0.78	-2.3
4,378,236	-		HGI48_RS19610	0.78	+1.8
4,378,236	-		HGI48_RS19610	0.78	+1.8
4,378,236	-		HGI48_RS19610	0.78	-1.7
4,378,277	-		HGI48_RS19610	0.81	-2.2
4,378,411	-				+0.2
4,378,411	-				-0.9
4,378,428	-				-0.9
4,378,436	+				+0.7
4,378,436	+				-1.2
4,378,436	+				+1.1
4,378,436	+				+0.7
4,378,436	+				+0.2
4,378,436	+				-0.5
4,378,436	+				+2.5
4,378,437	-				-0.2
4,378,437	-				-0.1
4,378,437	-				-0.4
4,378,437	-				-1.9
4,378,437	-				-1.9
4,378,437	-				+1.1
4,378,521	+				-0.2
4,378,521	+				+0.3
4,378,538	+				+0.6
4,378,539	-				+2.1
4,378,539	-				+1.4
4,378,539	-				-0.1
4,378,596	+				-2.1
4,378,597	-				-1.2
4,378,646	+		HGI48_RS19615	0.12	-0.9
4,378,647	-		HGI48_RS19615	0.12	+1.8
4,378,647	-		HGI48_RS19615	0.12	+0.9
4,378,714	+				-0.5
4,378,715	-		HGI48_RS19615	0.19	-0.1
4,378,715	-		HGI48_RS19615	0.19	+0.7
4,378,733	+		HGI48_RS19615	0.21	+0.7
4,378,733	+				+2.5
4,378,754	-		HGI48_RS19615	0.23	+2.3
4,378,862	+		HGI48_RS19615	0.33	+1.0
4,378,876	+		HGI48_RS19615	0.35	-0.6
4,378,877	-		HGI48_RS19615	0.35	-0.4
4,378,877	-		HGI48_RS19615	0.35	+0.2
4,378,879	+		HGI48_RS19615	0.35	+1.5
4,378,879	+		HGI48_RS19615	0.35	-2.3
4,378,879	+		HGI48_RS19615	0.35	+0.1
4,378,879	+		HGI48_RS19615	0.35	-1.9
4,378,879	+		HGI48_RS19615	0.35	+0.1
4,378,879	+		HGI48_RS19615	0.35	+1.5
4,378,880	-		HGI48_RS19615	0.35	+0.3
4,378,880	-		HGI48_RS19615	0.35	+0.9
4,378,902	+		HGI48_RS19615	0.37	-0.4
4,378,903	-		HGI48_RS19615	0.37	+0.2
4,378,903	-		HGI48_RS19615	0.37	-1.7
4,378,944	+		HGI48_RS19615	0.41	+0.9
4,378,945	-		HGI48_RS19615	0.41	+0.6
4,378,945	-				+1.5
4,379,033	+				+1.1
4,379,034	-		HGI48_RS19615	0.50	+0.1
4,379,044	+		HGI48_RS19615	0.51	-0.9
4,379,044	+				+1.1
4,379,045	-		HGI48_RS19615	0.51	-1.9
4,379,045	-		HGI48_RS19615	0.51	-1.0
4,379,052	+		HGI48_RS19615	0.52	-0.9
4,379,052	+		HGI48_RS19615	0.52	+0.0
4,379,052	+		HGI48_RS19615	0.52	-1.5
4,379,052	+		HGI48_RS19615	0.52	-0.2
4,379,052	+		HGI48_RS19615	0.52	+1.4
4,379,052	+		HGI48_RS19615	0.52	+0.1
4,379,053	-		HGI48_RS19615	0.52	-2.3
4,379,053	-		HGI48_RS19615	0.52	+0.1
4,379,054	+		HGI48_RS19615	0.52	-2.1
4,379,054	+		HGI48_RS19615	0.52	+0.9
4,379,081	+		HGI48_RS19615	0.55	+0.5
4,379,084	-		HGI48_RS19615	0.55	+1.1
4,379,182	+		HGI48_RS19615	0.64	-1.2
4,379,182	+		HGI48_RS19615	0.64	-0.6
4,379,182	+		HGI48_RS19615	0.64	-0.5
4,379,182	+		HGI48_RS19615	0.64	-0.8
4,379,182	+		HGI48_RS19615	0.64	-1.2
4,379,183	-		HGI48_RS19615	0.64	+0.1
4,379,220	-		HGI48_RS19615	0.68	-0.2
4,379,274	+				+0.1
4,379,274	+		HGI48_RS19615	0.73	+0.9
4,379,275	-		HGI48_RS19615	0.73	-1.7
4,379,307	-				+1.1
4,379,389	+		HGI48_RS19615	0.84	-1.7
4,379,389	+		HGI48_RS19615	0.84	-1.9
4,379,389	+		HGI48_RS19615	0.84	-1.5
4,379,390	-		HGI48_RS19615	0.84	+2.1
4,379,390	-				+0.1
4,379,390	-		HGI48_RS19615	0.84	-1.6
4,379,390	-		HGI48_RS19615	0.84	+0.4
4,379,390	-		HGI48_RS19615	0.84	-0.2
4,379,390	-				-0.5
4,379,390	-		HGI48_RS19615	0.84	+2.0
4,379,390	-		HGI48_RS19615	0.84	-1.0
4,379,416	+		HGI48_RS19615	0.87	-1.5
4,379,423	+		HGI48_RS19615	0.88	-1.8
4,379,423	+		HGI48_RS19615	0.88	-0.9
4,379,423	+		HGI48_RS19615	0.88	+0.3
4,379,423	+		HGI48_RS19615	0.88	-0.5
4,379,423	+		HGI48_RS19615	0.88	-0.9
4,379,423	+		HGI48_RS19615	0.88	-1.2
4,379,424	-		HGI48_RS19615	0.88	+0.1
4,379,424	-		HGI48_RS19615	0.88	-0.5
4,379,429	+		HGI48_RS19615	0.88	-1.5
4,379,430	-		HGI48_RS19615	0.88	+1.3
4,379,430	-		HGI48_RS19615	0.88	-0.1