Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15860

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,566,080	+		HGI48_RS15855	0.46	-1.2
3,566,081	-		HGI48_RS15855	0.47	-1.2
3,566,098	-		HGI48_RS15855	0.48	-0.4
3,566,166	+		HGI48_RS15855	0.52	-0.6
3,566,263	+		HGI48_RS15855	0.58	-2.2
3,566,263	+		HGI48_RS15855	0.58	-2.9
3,566,263	+		HGI48_RS15855	0.58	-1.2
3,566,263	+		HGI48_RS15855	0.58	+1.2
3,566,263	+		HGI48_RS15855	0.58	-1.6
3,566,263	+		HGI48_RS15855	0.58	-0.6
3,566,264	-		HGI48_RS15855	0.58	-1.2
3,566,264	-		HGI48_RS15855	0.58	-0.6
3,566,264	-		HGI48_RS15855	0.58	+0.8
3,566,264	-		HGI48_RS15855	0.58	+0.5
3,566,264	-		HGI48_RS15855	0.58	-1.3
3,566,316	+		HGI48_RS15855	0.61	+0.2
3,566,389	+		HGI48_RS15855	0.66	-0.0
3,566,389	+		HGI48_RS15855	0.66	+0.0
3,566,389	+		HGI48_RS15855	0.66	-1.5
3,566,390	-		HGI48_RS15855	0.66	+0.6
3,566,390	-		HGI48_RS15855	0.66	+0.3
3,566,390	-		HGI48_RS15855	0.66	-2.5
3,566,390	-				+0.8
3,566,447	-		HGI48_RS15855	0.69	-0.2
3,566,467	+		HGI48_RS15855	0.71	-2.9
3,566,468	-		HGI48_RS15855	0.71	-1.2
3,566,468	-		HGI48_RS15855	0.71	-0.2
3,566,468	-		HGI48_RS15855	0.71	-0.5
3,566,468	-		HGI48_RS15855	0.71	+0.0
3,566,468	-		HGI48_RS15855	0.71	-1.5
3,566,527	+				+2.4
3,566,527	+		HGI48_RS15855	0.74	-1.0
3,566,528	-		HGI48_RS15855	0.74	-0.8
3,566,528	-		HGI48_RS15855	0.74	-1.2
3,566,663	+				+1.6
3,566,663	+		HGI48_RS15855	0.83	-1.2
3,566,663	+		HGI48_RS15855	0.83	-0.8
3,566,663	+		HGI48_RS15855	0.83	-2.3
3,566,664	-		HGI48_RS15855	0.83	-0.4
3,566,664	-		HGI48_RS15855	0.83	-1.9
3,566,664	-		HGI48_RS15855	0.83	-1.2
3,566,664	-		HGI48_RS15855	0.83	+0.4
3,566,664	-		HGI48_RS15855	0.83	-2.0
3,566,664	-		HGI48_RS15855	0.83	-1.0
3,566,684	-		HGI48_RS15855	0.84	-1.5
3,566,733	+				-0.8
3,566,733	+				+1.6
3,566,734	-		HGI48_RS15855	0.87	-1.8
3,566,734	-		HGI48_RS15855	0.87	-2.0
3,566,764	+		HGI48_RS15855	0.89	-1.3
3,566,764	+				-0.8
3,566,765	-				+2.6
3,566,765	-		HGI48_RS15855	0.89	-1.0
3,566,765	-		HGI48_RS15855	0.89	-1.2
3,566,765	-		HGI48_RS15855	0.89	-1.6
3,566,767	+		HGI48_RS15855	0.89	-2.0
3,566,767	+		HGI48_RS15855	0.89	-1.3
3,566,768	-		HGI48_RS15855	0.89	-2.5
3,566,804	+				+0.1
3,566,805	-				-0.5
3,566,805	-				-0.8
3,566,878	+				+0.8
3,567,023	+				-0.0
3,567,023	+				+0.2
3,567,023	+				+0.2
3,567,024	-				-0.5
3,567,027	+				-2.1
3,567,027	+				-1.2
3,567,028	-				-0.2
3,567,028	-				+0.4
3,567,032	-				+0.8
3,567,039	-				-0.8
3,567,039	-				+1.4
3,567,042	+				-2.5
3,567,043	-				+0.4
3,567,043	-				+0.1
3,567,046	+				-0.2
3,567,046	+				+1.4
3,567,046	+				-1.5
3,567,047	-				-2.0
3,567,053	+				+0.8
3,567,053	+				+0.8
3,567,054	-				-2.0
3,567,054	-				-1.2
3,567,057	+				-1.2
3,567,057	+				-1.5
3,567,057	+				+0.2
3,567,058	-				-1.0
3,567,061	+				+0.8
3,567,101	+				-1.2
3,567,289	+		HGI48_RS15860	0.32	-0.6
3,567,290	-		HGI48_RS15860	0.32	-1.3
3,567,290	-		HGI48_RS15860	0.32	+0.0
3,567,363	+		HGI48_RS15860	0.42	-0.4
3,567,364	-		HGI48_RS15860	0.42	+0.6
3,567,366	-		HGI48_RS15860	0.42	-1.8
3,567,427	-		HGI48_RS15860	0.50	+0.6
3,567,443	+		HGI48_RS15860	0.53	-2.0
3,567,467	+		HGI48_RS15860	0.56	-0.8
3,567,467	+		HGI48_RS15860	0.56	+1.2
3,567,467	+		HGI48_RS15860	0.56	+2.7
3,567,467	+		HGI48_RS15860	0.56	-1.2
3,567,477	+		HGI48_RS15860	0.57	-0.6
3,567,478	-		HGI48_RS15860	0.57	-0.3
3,567,499	-		HGI48_RS15860	0.60	-0.4
3,567,750	+				-2.0
3,567,750	+				+1.3
3,567,751	-				-1.2
3,567,751	-				+0.5
3,567,778	-				+0.1
3,567,778	-				-1.5
3,567,778	-				-2.2
3,567,778	-				-1.7
3,567,809	-				+0.8
3,567,809	-				-1.2
3,567,809	-				-2.1
3,567,809	-				+0.8
3,567,809	-				+2.1
3,567,830	+				-0.9
3,567,830	+				+1.2
3,567,830	+				+0.0
3,567,830	+				+0.5
3,567,831	-				+0.7
3,567,831	-				-0.4
3,567,900	+				-0.4
3,567,900	+				+1.4
3,567,901	-				+1.2
3,567,901	-				-0.2
3,567,901	-				+1.2
3,567,901	-				-1.5
3,567,903	-				-0.8
3,567,903	-				-1.5
3,567,903	-				-1.6
3,567,903	-				-0.5
3,567,924	+				-0.2
3,567,924	+				+0.1
3,567,924	+				+0.2
3,567,925	-				+0.2
3,567,925	-				+1.2
3,567,925	-				+0.7
3,567,925	-				+0.7
3,567,925	-				+0.2
3,567,925	-				-0.2
3,567,925	-				+0.8
3,568,060	+				-0.0
3,568,060	+				-1.0
3,568,060	+				-0.1
3,568,060	+				-0.8
3,568,060	+				+0.3
3,568,060	+				+0.1
3,568,060	+				+2.8
3,568,061	-				+0.1
3,568,061	-				+0.8
3,568,101	+		HGI48_RS15865	0.13	+0.6
3,568,170	-		HGI48_RS15865	0.18	-0.9
3,568,275	+		HGI48_RS15865	0.25	-1.3
3,568,275	+		HGI48_RS15865	0.25	-0.8
3,568,275	+		HGI48_RS15865	0.25	-1.7
3,568,275	+		HGI48_RS15865	0.25	-0.1
3,568,275	+		HGI48_RS15865	0.25	+2.0
3,568,275	+		HGI48_RS15865	0.25	+0.2
3,568,275	+		HGI48_RS15865	0.25	-0.8
3,568,275	+		HGI48_RS15865	0.25	+1.4
3,568,276	+		HGI48_RS15865	0.26	+0.4
3,568,276	-		HGI48_RS15865	0.26	-0.9
3,568,276	-		HGI48_RS15865	0.26	+0.8
3,568,276	-		HGI48_RS15865	0.26	-2.9
3,568,276	-		HGI48_RS15865	0.26	-0.8
3,568,276	-		HGI48_RS15865	0.26	-1.2
3,568,276	-		HGI48_RS15865	0.26	-1.0
3,568,347	+		HGI48_RS15865	0.31	+1.5
3,568,347	+		HGI48_RS15865	0.31	-0.9
3,568,347	+		HGI48_RS15865	0.31	+2.1
3,568,347	+		HGI48_RS15865	0.31	+1.0
3,568,347	+		HGI48_RS15865	0.31	-1.0
3,568,348	-		HGI48_RS15865	0.31	-0.0
3,568,348	-		HGI48_RS15865	0.31	-1.2
3,568,348	-		HGI48_RS15865	0.31	+0.9
3,568,348	-		HGI48_RS15865	0.31	+0.5
3,568,348	-		HGI48_RS15865	0.31	-1.3
3,568,412	+		HGI48_RS15865	0.36	-0.8
3,568,412	+		HGI48_RS15865	0.36	-2.0
3,568,412	+		HGI48_RS15865	0.36	+0.5
3,568,413	-		HGI48_RS15865	0.36	-0.5
3,568,440	-		HGI48_RS15865	0.38	-2.6
3,568,449	-		HGI48_RS15865	0.38	-1.2
3,568,449	-		HGI48_RS15865	0.38	-0.2
3,568,558	+		HGI48_RS15865	0.46	+1.4
3,568,558	+		HGI48_RS15865	0.46	-0.2
3,568,558	+		HGI48_RS15865	0.46	+0.8
3,568,559	-		HGI48_RS15865	0.46	+1.9
3,568,559	-		HGI48_RS15865	0.46	-1.3
3,568,559	-		HGI48_RS15865	0.46	-1.2
3,568,559	-		HGI48_RS15865	0.46	+0.5
3,568,559	-		HGI48_RS15865	0.46	+0.5
3,568,605	+		HGI48_RS15865	0.50	+0.5
3,568,605	+		HGI48_RS15865	0.50	+0.4
3,568,605	+		HGI48_RS15865	0.50	-0.0
3,568,605	+		HGI48_RS15865	0.50	-0.2
3,568,605	+				+1.6
3,568,605	+		HGI48_RS15865	0.50	+1.2
3,568,606	-		HGI48_RS15865	0.50	+0.1
3,568,606	-		HGI48_RS15865	0.50	-0.6
3,568,606	-		HGI48_RS15865	0.50	-0.2
3,568,606	-		HGI48_RS15865	0.50	+1.7
3,568,608	+		HGI48_RS15865	0.50	+0.7
3,568,608	+				+2.2
3,568,654	+				+1.2
3,568,654	+		HGI48_RS15865	0.54	+0.3
3,568,654	+		HGI48_RS15865	0.54	-0.2
3,568,654	+		HGI48_RS15865	0.54	-0.4
3,568,654	+		HGI48_RS15865	0.54	+0.3
3,568,654	+		HGI48_RS15865	0.54	-0.2
3,568,655	-		HGI48_RS15865	0.54	+0.6
3,568,655	-		HGI48_RS15865	0.54	+0.6
3,568,655	-		HGI48_RS15865	0.54	+2.0
3,568,655	-		HGI48_RS15865	0.54	+0.5
3,568,655	-		HGI48_RS15865	0.54	-0.8
3,568,655	-				+2.2
3,568,655	-		HGI48_RS15865	0.54	+1.5
3,568,682	+		HGI48_RS15865	0.56	-0.2
3,568,682	+		HGI48_RS15865	0.56	-0.6
3,568,683	-				+0.2
3,568,698	-		HGI48_RS15865	0.57	+0.3
3,568,758	+		HGI48_RS15865	0.61	-2.0
3,568,758	+				+0.8
3,568,758	+		HGI48_RS15865	0.61	+1.7
3,568,759	-		HGI48_RS15865	0.61	+0.5
3,568,759	-		HGI48_RS15865	0.61	+0.1
3,568,790	+		HGI48_RS15865	0.64	-0.4
3,568,791	-		HGI48_RS15865	0.64	+0.8
3,568,791	-		HGI48_RS15865	0.64	-0.2