Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10605

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,289,222	+		HGI48_RS10600	0.39	-0.3
2,289,222	+				-1.0
2,289,222	+		HGI48_RS10600	0.39	+2.2
2,289,222	+		HGI48_RS10600	0.39	+0.3
2,289,222	+		HGI48_RS10600	0.39	-1.2
2,289,223	-		HGI48_RS10600	0.39	-1.8
2,289,223	-		HGI48_RS10600	0.39	-1.4
2,289,227	-				-1.0
2,289,227	-		HGI48_RS10600	0.39	-0.4
2,289,227	-		HGI48_RS10600	0.39	+0.8
2,289,227	-		HGI48_RS10600	0.39	+2.0
2,289,291	+				-0.4
2,289,292	-		HGI48_RS10600	0.43	+0.6
2,289,292	-		HGI48_RS10600	0.43	-0.7
2,289,292	-				-1.0
2,289,375	+		HGI48_RS10600	0.49	-0.2
2,289,375	+		HGI48_RS10600	0.49	-0.3
2,289,376	-		HGI48_RS10600	0.49	+0.4
2,289,376	-		HGI48_RS10600	0.49	+0.1
2,289,376	-		HGI48_RS10600	0.49	-1.4
2,289,376	-		HGI48_RS10600	0.49	+0.8
2,289,376	-		HGI48_RS10600	0.49	+0.9
2,289,665	+		HGI48_RS10600	0.68	-0.8
2,289,689	+		HGI48_RS10600	0.69	+0.6
2,289,699	-		HGI48_RS10600	0.70	-0.4
2,289,720	-		HGI48_RS10600	0.71	+0.8
2,289,720	-		HGI48_RS10600	0.71	-0.8
2,289,722	+		HGI48_RS10600	0.72	-2.0
2,289,723	-		HGI48_RS10600	0.72	+0.1
2,289,723	-		HGI48_RS10600	0.72	+0.3
2,289,723	-		HGI48_RS10600	0.72	-0.1
2,289,723	-		HGI48_RS10600	0.72	-0.0
2,289,791	+		HGI48_RS10600	0.76	+1.8
2,289,945	+		HGI48_RS10600	0.86	+0.2
2,289,945	+		HGI48_RS10600	0.86	-2.8
2,289,946	-				+0.6
2,289,946	-		HGI48_RS10600	0.86	-0.7
2,289,957	+		HGI48_RS10600	0.87	-1.1
2,289,958	-		HGI48_RS10600	0.87	+0.2
2,289,958	-		HGI48_RS10600	0.87	-0.0
2,289,958	-		HGI48_RS10600	0.87	+0.4
2,290,245	+				-1.6
2,290,245	+				+0.1
2,290,245	+				+0.6
2,290,245	+				-2.4
2,290,245	+				-1.8
2,290,246	-				-1.2
2,290,246	-				+0.6
2,290,246	-				-2.0
2,290,261	+				-3.2
2,290,261	+				+0.6
2,290,261	+				-1.0
2,290,261	+				+0.2
2,290,261	+				+0.6
2,290,262	-				-1.8
2,290,262	-				+0.7
2,290,286	+		HGI48_RS10605	0.11	-2.0
2,290,286	+		HGI48_RS10605	0.11	+1.4
2,290,286	+		HGI48_RS10605	0.11	-0.8
2,290,287	-		HGI48_RS10605	0.12	-0.2
2,290,287	-		HGI48_RS10605	0.12	+1.1
2,290,287	-		HGI48_RS10605	0.12	-2.4
2,290,287	-		HGI48_RS10605	0.12	+0.4
2,290,287	-		HGI48_RS10605	0.12	-0.1
2,290,287	-		HGI48_RS10605	0.12	+0.5
2,290,287	-				-1.0
2,290,291	+		HGI48_RS10605	0.12	-0.8
2,290,552	+		HGI48_RS10605	0.38	+0.7
2,290,583	+		HGI48_RS10605	0.42	+0.2
2,290,612	-		HGI48_RS10605	0.44	-0.0
2,290,612	-		HGI48_RS10605	0.44	+0.2
2,290,612	-		HGI48_RS10605	0.44	-1.0
2,290,612	-		HGI48_RS10605	0.44	-3.4
2,290,628	+		HGI48_RS10605	0.46	-0.3
2,290,676	+		HGI48_RS10605	0.51	-0.9
2,290,676	+		HGI48_RS10605	0.51	-2.4
2,290,769	+		HGI48_RS10605	0.60	-0.4
2,290,769	+		HGI48_RS10605	0.60	-0.4
2,290,769	+		HGI48_RS10605	0.60	+0.4
2,290,770	-		HGI48_RS10605	0.60	-1.8
2,290,770	-		HGI48_RS10605	0.60	-2.4
2,290,841	+		HGI48_RS10605	0.68	+1.2
2,290,898	+		HGI48_RS10605	0.73	-2.8
2,290,899	-		HGI48_RS10605	0.74	-0.5
2,290,961	-				+1.6
2,290,999	+		HGI48_RS10605	0.84	+0.3
2,290,999	+		HGI48_RS10605	0.84	+0.2
2,291,000	-		HGI48_RS10605	0.84	-0.4
2,291,000	-		HGI48_RS10605	0.84	+0.8
2,291,004	+				-1.0
2,291,004	+		HGI48_RS10605	0.84	-1.4
2,291,004	+		HGI48_RS10605	0.84	-3.0
2,291,004	+		HGI48_RS10605	0.84	+0.2
2,291,004	+		HGI48_RS10605	0.84	-0.4
2,291,004	+		HGI48_RS10605	0.84	-0.8
2,291,005	-		HGI48_RS10605	0.84	-2.0
2,291,005	-		HGI48_RS10605	0.84	-2.6
2,291,005	-		HGI48_RS10605	0.84	-0.4
2,291,005	-		HGI48_RS10605	0.84	-1.4
2,291,005	-		HGI48_RS10605	0.84	+0.1
2,291,005	-				-1.0
2,291,005	-		HGI48_RS10605	0.84	+1.0
2,291,063	+				-1.6
2,291,063	+				+0.6
2,291,063	+				-1.0
2,291,064	-				+0.6
2,291,082	+				-1.8
2,291,082	+				+0.6
2,291,082	+				+0.6
2,291,083	-				-0.4
2,291,083	-				-0.2
2,291,083	-				-0.9
2,291,083	-				-2.0
2,291,083	-				-1.1
2,291,130	+				+0.9
2,291,248	+				-0.7
2,291,248	+				+0.2
2,291,248	+				-1.4
2,291,249	-				-2.6
2,291,249	-				-0.2
2,291,249	-				-1.4
2,291,249	-				-0.4
2,291,383	-		HGI48_RS10610	0.15	-2.0
2,291,383	-		HGI48_RS10610	0.15	-0.9
2,291,392	+		HGI48_RS10610	0.15	-0.1
2,291,392	+		HGI48_RS10610	0.15	-2.0
2,291,392	+		HGI48_RS10610	0.15	-0.5
2,291,393	-		HGI48_RS10610	0.16	-1.8
2,291,393	-		HGI48_RS10610	0.16	-0.0
2,291,409	+		HGI48_RS10610	0.17	+1.1
2,291,410	-		HGI48_RS10610	0.17	+0.8
2,291,446	-		HGI48_RS10610	0.21	-2.0
2,291,500	+		HGI48_RS10610	0.27	+0.6
2,291,501	-		HGI48_RS10610	0.27	-0.7
2,291,501	-		HGI48_RS10610	0.27	+0.6
2,291,503	+		HGI48_RS10610	0.27	-0.9
2,291,549	-		HGI48_RS10610	0.32	-1.6
2,291,549	-		HGI48_RS10610	0.32	-1.9
2,291,567	-		HGI48_RS10610	0.34	+0.1
2,291,656	-		HGI48_RS10610	0.43	+1.2
2,291,656	-		HGI48_RS10610	0.43	-0.2
2,291,794	-				+0.6
2,291,801	+		HGI48_RS10610	0.58	-1.8
2,291,801	+		HGI48_RS10610	0.58	+0.5
2,291,802	-				-1.0
2,291,802	-				-0.0
2,291,802	-		HGI48_RS10610	0.59	+0.2
2,291,802	-				-1.0
2,291,925	+		HGI48_RS10610	0.72	-0.3
2,291,925	+		HGI48_RS10610	0.72	-2.2
2,291,975	+		HGI48_RS10610	0.77	-1.3
2,291,976	-		HGI48_RS10610	0.77	+1.2
2,292,037	+		HGI48_RS10610	0.83	-0.4
2,292,038	-		HGI48_RS10610	0.83	-0.1
2,292,038	-		HGI48_RS10610	0.83	+0.1
2,292,038	-		HGI48_RS10610	0.83	+1.5