Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS02340 and HGI48_RS02345 are separated by 21 nucleotides HGI48_RS02345 and HGI48_RS02350 overlap by 4 nucleotides
HGI48_RS02340: HGI48_RS02340 - FAD-dependent 2-octaprenylphenol hydroxylase, at 508,312 to 509,523
_RS02340
HGI48_RS02345: HGI48_RS02345 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 509,545 to 510,723
_RS02345
HGI48_RS02350: HGI48_RS02350 - Xaa-Pro aminopeptidase, at 510,720 to 512,048
_RS02350
Position (kb) 509
510
511 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 509.524 kb on - strand at 509.524 kb on - strand at 509.524 kb on - strand at 509.581 kb on + strand at 509.581 kb on + strand at 509.582 kb on - strand at 510.890 kb on - strand, within HGI48_RS02350 at 510.890 kb on - strand, within HGI48_RS02350 at 510.918 kb on - strand, within HGI48_RS02350 at 511.008 kb on - strand, within HGI48_RS02350 at 511.008 kb on - strand, within HGI48_RS02350 at 511.008 kb on - strand, within HGI48_RS02350 at 511.184 kb on - strand at 511.332 kb on - strand, within HGI48_RS02350 at 511.332 kb on - strand, within HGI48_RS02350 at 511.332 kb on - strand at 511.332 kb on - strand, within HGI48_RS02350 at 511.367 kb on - strand, within HGI48_RS02350 at 511.367 kb on - strand, within HGI48_RS02350 at 511.367 kb on - strand, within HGI48_RS02350 at 511.527 kb on - strand at 511.527 kb on - strand, within HGI48_RS02350 at 511.527 kb on - strand, within HGI48_RS02350 at 511.527 kb on - strand, within HGI48_RS02350 at 511.539 kb on - strand, within HGI48_RS02350 at 511.539 kb on - strand, within HGI48_RS02350 at 511.539 kb on - strand, within HGI48_RS02350 at 511.546 kb on - strand, within HGI48_RS02350 at 511.649 kb on - strand, within HGI48_RS02350 at 511.649 kb on - strand, within HGI48_RS02350 at 511.655 kb on - strand, within HGI48_RS02350 at 511.673 kb on - strand, within HGI48_RS02350
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 509,524 - -2.9 509,524 - +0.8 509,524 - -1.5 509,581 + +1.1 509,581 + -1.3 509,582 - +0.3 510,890 - HGI48_RS02350 0.13 -0.8 510,890 - HGI48_RS02350 0.13 -1.6 510,918 - HGI48_RS02350 0.15 +1.8 511,008 - HGI48_RS02350 0.22 -0.9 511,008 - HGI48_RS02350 0.22 -0.9 511,008 - HGI48_RS02350 0.22 +0.5 511,184 - +1.1 511,332 - HGI48_RS02350 0.46 +0.2 511,332 - HGI48_RS02350 0.46 +0.7 511,332 - +0.5 511,332 - HGI48_RS02350 0.46 -0.9 511,367 - HGI48_RS02350 0.49 +0.7 511,367 - HGI48_RS02350 0.49 +0.7 511,367 - HGI48_RS02350 0.49 -0.5 511,527 - -0.5 511,527 - HGI48_RS02350 0.61 -0.7 511,527 - HGI48_RS02350 0.61 -1.8 511,527 - HGI48_RS02350 0.61 +1.1 511,539 - HGI48_RS02350 0.62 +0.8 511,539 - HGI48_RS02350 0.62 +1.6 511,539 - HGI48_RS02350 0.62 -0.2 511,546 - HGI48_RS02350 0.62 -0.1 511,649 - HGI48_RS02350 0.70 +0.2 511,649 - HGI48_RS02350 0.70 +0.5 511,655 - HGI48_RS02350 0.70 +1.4 511,673 - HGI48_RS02350 0.72 +0.8
Or see this region's nucleotide sequence