Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20845

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,653,243	+				+1.4
4,653,243	+				+1.0
4,653,243	+				+0.7
4,653,243	+				-1.0
4,653,243	+				-0.1
4,653,243	+				-0.6
4,653,244	-				-0.1
4,653,246	+				-0.4
4,653,246	+				-1.0
4,653,246	+				-0.2
4,653,247	-				+0.0
4,653,247	-				-0.6
4,653,247	-				+1.0
4,653,317	+		HGI48_RS20840	0.12	-0.6
4,653,317	+		HGI48_RS20840	0.12	-0.9
4,653,336	+		HGI48_RS20840	0.14	-1.6
4,653,337	-		HGI48_RS20840	0.14	+0.0
4,653,337	-		HGI48_RS20840	0.14	-1.1
4,653,393	+		HGI48_RS20840	0.20	+0.1
4,653,394	-		HGI48_RS20840	0.20	-0.6
4,653,394	-		HGI48_RS20840	0.20	-0.2
4,653,397	+		HGI48_RS20840	0.20	-0.6
4,653,398	-		HGI48_RS20840	0.20	-1.0
4,653,398	-		HGI48_RS20840	0.20	-1.6
4,653,405	+		HGI48_RS20840	0.21	+0.8
4,653,405	+		HGI48_RS20840	0.21	-0.2
4,653,444	+		HGI48_RS20840	0.25	+0.9
4,653,444	+		HGI48_RS20840	0.25	-0.7
4,653,444	+		HGI48_RS20840	0.25	-1.3
4,653,445	-		HGI48_RS20840	0.25	-0.7
4,653,445	-		HGI48_RS20840	0.25	+0.6
4,653,445	-		HGI48_RS20840	0.25	+0.0
4,653,445	-		HGI48_RS20840	0.25	-0.8
4,653,450	+		HGI48_RS20840	0.25	-0.3
4,653,450	+		HGI48_RS20840	0.25	+0.6
4,653,451	-		HGI48_RS20840	0.25	-2.6
4,653,456	+		HGI48_RS20840	0.26	-1.6
4,653,456	+		HGI48_RS20840	0.26	+1.0
4,653,456	+		HGI48_RS20840	0.26	-1.3
4,653,457	-		HGI48_RS20840	0.26	-1.5
4,653,457	-		HGI48_RS20840	0.26	-0.7
4,653,457	-				-0.6
4,653,457	-		HGI48_RS20840	0.26	+0.5
4,653,457	-		HGI48_RS20840	0.26	-1.0
4,653,466	+		HGI48_RS20840	0.27	+0.5
4,653,466	+		HGI48_RS20840	0.27	-0.8
4,653,481	-		HGI48_RS20840	0.28	-1.3
4,653,693	+		HGI48_RS20840	0.50	+0.0
4,653,693	+		HGI48_RS20840	0.50	+0.7
4,653,693	+		HGI48_RS20840	0.50	-0.1
4,653,693	+		HGI48_RS20840	0.50	+0.2
4,653,693	+		HGI48_RS20840	0.50	-0.4
4,653,693	+		HGI48_RS20840	0.50	-2.1
4,653,693	+		HGI48_RS20840	0.50	+0.5
4,653,693	+		HGI48_RS20840	0.50	-0.1
4,653,693	+		HGI48_RS20840	0.50	+0.6
4,653,693	+		HGI48_RS20840	0.50	+0.9
4,653,693	+		HGI48_RS20840	0.50	+1.0
4,653,693	+		HGI48_RS20840	0.50	-2.4
4,653,693	+		HGI48_RS20840	0.50	+0.4
4,653,693	+		HGI48_RS20840	0.50	-0.4
4,653,693	+		HGI48_RS20840	0.50	-1.0
4,653,693	+		HGI48_RS20840	0.50	+0.3
4,653,693	+		HGI48_RS20840	0.50	-1.3
4,653,693	+				+0.4
4,653,693	+		HGI48_RS20840	0.50	-1.6
4,653,693	+		HGI48_RS20840	0.50	+1.3
4,653,693	+		HGI48_RS20840	0.50	-2.0
4,653,693	+		HGI48_RS20840	0.50	-1.6
4,653,694	-		HGI48_RS20840	0.50	-0.5
4,653,694	-		HGI48_RS20840	0.50	+0.6
4,653,694	-		HGI48_RS20840	0.50	-0.4
4,653,694	-		HGI48_RS20840	0.50	-1.3
4,653,694	-		HGI48_RS20840	0.50	-0.2
4,653,694	-		HGI48_RS20840	0.50	+1.4
4,653,694	-		HGI48_RS20840	0.50	+0.0
4,653,694	-		HGI48_RS20840	0.50	+1.4
4,653,694	-		HGI48_RS20840	0.50	+0.0
4,653,694	-		HGI48_RS20840	0.50	-1.5
4,653,694	-		HGI48_RS20840	0.50	-0.1
4,653,694	-		HGI48_RS20840	0.50	-1.0
4,653,694	-		HGI48_RS20840	0.50	-0.6
4,653,694	-				+0.4
4,653,694	-		HGI48_RS20840	0.50	-0.3
4,653,694	-		HGI48_RS20840	0.50	+0.0
4,653,715	-		HGI48_RS20840	0.52	-0.3
4,653,757	+		HGI48_RS20840	0.56	-1.4
4,653,757	+		HGI48_RS20840	0.56	-0.6
4,653,757	+		HGI48_RS20840	0.56	+0.6
4,653,757	+		HGI48_RS20840	0.56	-0.8
4,653,758	-		HGI48_RS20840	0.56	-1.6
4,653,758	-		HGI48_RS20840	0.56	+0.0
4,653,758	-		HGI48_RS20840	0.56	-0.6
4,653,758	-		HGI48_RS20840	0.56	-1.4
4,653,758	-				+2.3
4,653,804	+				-0.6
4,653,823	+		HGI48_RS20840	0.63	-0.6
4,653,823	+		HGI48_RS20840	0.63	-0.9
4,653,824	-		HGI48_RS20840	0.63	-2.0
4,653,824	-		HGI48_RS20840	0.63	-1.1
4,653,824	-		HGI48_RS20840	0.63	+0.7
4,653,824	-		HGI48_RS20840	0.63	-2.4
4,653,824	-		HGI48_RS20840	0.63	-0.1
4,653,824	-		HGI48_RS20840	0.63	+0.9
4,653,824	-		HGI48_RS20840	0.63	+0.0
4,653,824	-		HGI48_RS20840	0.63	+0.0
4,653,836	+		HGI48_RS20840	0.64	-0.8
4,653,837	-		HGI48_RS20840	0.64	-0.1
4,653,883	+		HGI48_RS20840	0.69	-0.5
4,653,916	-		HGI48_RS20840	0.72	+0.8
4,653,916	-		HGI48_RS20840	0.72	-1.2
4,654,002	+		HGI48_RS20840	0.81	+0.0
4,654,057	+		HGI48_RS20840	0.86	+0.7
4,654,058	-		HGI48_RS20840	0.86	-0.8
4,654,108	-				-0.1
4,654,108	-				-1.0
4,654,190	+				+0.0
4,654,196	+				-1.0
4,654,196	+				-0.1
4,654,196	+				-0.1
4,654,196	+				-0.2
4,654,196	+				-0.6
4,654,196	+				-0.4
4,654,196	+				-0.6
4,654,196	+				-0.8
4,654,197	-				+0.9
4,654,197	-				-1.0
4,654,197	-				-0.6
4,654,197	-				-0.3
4,654,197	-				+2.0
4,654,197	-				+0.9
4,654,197	-				-0.4
4,654,197	-				-0.6
4,654,308	+		HGI48_RS20845	0.21	-1.0
4,654,309	-		HGI48_RS20845	0.22	+1.0
4,654,392	+		HGI48_RS20845	0.39	-1.0
4,654,392	+		HGI48_RS20845	0.39	+0.7
4,654,392	+		HGI48_RS20845	0.39	+0.8
4,654,392	+		HGI48_RS20845	0.39	+0.0
4,654,393	-		HGI48_RS20845	0.40	-1.6
4,654,534	+		HGI48_RS20845	0.70	+1.5
4,654,535	-		HGI48_RS20845	0.70	-1.1
4,654,535	-		HGI48_RS20845	0.70	+0.2
4,654,644	+				-2.1
4,654,644	+				-0.3
4,654,644	+				-1.0
4,654,645	-				-1.6
4,654,645	-				-0.8
4,654,645	-				-0.2
4,654,645	-				-0.2
4,654,645	-				-0.6
4,654,649	+				+0.0
4,654,649	+				+0.4
4,654,649	+				-0.7
4,654,649	+				-0.6
4,654,649	+				+2.0
4,654,649	+				-0.3
4,654,649	+				-1.3
4,654,649	+				+2.1
4,654,649	+				+2.6
4,654,649	+				+1.2
4,654,650	-				-1.0
4,654,650	-				+1.0
4,654,650	-				-1.2
4,654,650	-				+0.4
4,654,650	-				+1.0
4,654,679	+				-1.6
4,654,679	+				-0.6
4,654,679	+				+0.7
4,654,679	+				-1.0
4,654,679	+				+1.0
4,654,680	-				-2.8
4,654,680	-				-0.6
4,654,680	-				+0.5
4,654,680	-				-1.8
4,654,706	+				-0.6
4,654,728	+				+1.4
4,654,728	+				+0.0
4,654,730	+				+1.4
4,654,730	+				-1.0
4,654,730	+				+0.0
4,654,730	+				-0.1
4,654,730	+				-0.3
4,654,730	+				-0.3
4,654,731	-				-0.4
4,654,731	-				-0.3
4,654,731	-				-0.4
4,654,791	-				-1.0
4,654,814	+				-1.6
4,654,815	-				+0.4
4,654,815	-				-1.7
4,654,844	+				-1.0
4,654,844	+				+1.9
4,654,845	-				+1.0
4,654,845	-				-0.8
4,654,919	+				-1.0
4,654,939	-				+0.4
4,654,940	+				-0.3
4,654,940	+				-1.4
4,654,940	+				-2.3
4,654,940	+				-1.5
4,654,941	-				+0.9
4,654,941	-				-1.4
4,654,941	-				+0.7
4,654,941	-				-0.6
4,654,941	-				+0.7
4,654,941	-				-0.3
4,654,941	-				-0.8
4,654,941	-				+0.8
4,654,971	+				+0.5
4,654,972	-				-1.0
4,654,972	-				-0.8
4,654,989	-				+0.5
4,655,023	+				-1.0
4,655,024	-				+0.5
4,655,024	-				+0.2
4,655,027	+				+1.0
4,655,027	+				+1.7
4,655,027	+				-0.7
4,655,027	+				-1.1
4,655,027	+				+1.0
4,655,027	+				-1.0
4,655,027	+				-1.8
4,655,027	+				+0.7
4,655,027	+				+0.7
4,655,028	-				+2.0
4,655,028	-				-0.1
4,655,028	-				-1.4
4,655,028	-				+0.8
4,655,028	-				+0.3
4,655,028	-				+0.3
4,655,028	-				-0.5
4,655,028	-				+0.3
4,655,028	-				-0.4
4,655,028	-				+0.4
4,655,028	-				-1.0
4,655,028	-				-1.0
4,655,028	-				-0.4
4,655,028	-				+1.0
4,655,061	-				-0.2
4,655,066	+				-0.6
4,655,066	+				-0.9
4,655,066	+				-1.6
4,655,067	-				-2.4
4,655,067	-				-1.6
4,655,070	-				+0.9
4,655,070	-				-2.0
4,655,110	-		HGI48_RS20850	0.11	-0.4
4,655,141	-		HGI48_RS20850	0.12	-2.1
4,655,153	+				+0.4
4,655,153	+		HGI48_RS20850	0.12	-1.7
4,655,153	+		HGI48_RS20850	0.12	+0.5
4,655,153	+		HGI48_RS20850	0.12	-0.4
4,655,153	+		HGI48_RS20850	0.12	-0.1
4,655,153	+		HGI48_RS20850	0.12	-0.7
4,655,153	+		HGI48_RS20850	0.12	-1.2
4,655,153	+		HGI48_RS20850	0.12	-2.0
4,655,153	+		HGI48_RS20850	0.12	-2.1
4,655,153	+		HGI48_RS20850	0.12	-0.3
4,655,154	-				+0.4
4,655,154	-		HGI48_RS20850	0.12	-2.3
4,655,154	-		HGI48_RS20850	0.12	-0.3
4,655,154	-		HGI48_RS20850	0.12	-0.6
4,655,154	-				+0.4
4,655,154	-		HGI48_RS20850	0.12	+1.2
4,655,154	-		HGI48_RS20850	0.12	-0.3
4,655,166	+		HGI48_RS20850	0.12	-0.6
4,655,207	+				-0.6
4,655,207	+		HGI48_RS20850	0.13	-0.3
4,655,207	+		HGI48_RS20850	0.13	-0.9
4,655,208	-				-0.6
4,655,208	-		HGI48_RS20850	0.13	-0.4
4,655,208	-		HGI48_RS20850	0.13	-1.6
4,655,213	+		HGI48_RS20850	0.14	-0.3
4,655,213	+				+3.1
4,655,214	-		HGI48_RS20850	0.14	+0.1
4,655,214	-		HGI48_RS20850	0.14	+0.1
4,655,231	+		HGI48_RS20850	0.14	+0.1
4,655,231	+		HGI48_RS20850	0.14	-1.0
4,655,232	-		HGI48_RS20850	0.14	-0.3
4,655,232	-		HGI48_RS20850	0.14	-0.7
4,655,232	-		HGI48_RS20850	0.14	-1.3
4,655,255	+		HGI48_RS20850	0.15	-1.3
4,655,255	+		HGI48_RS20850	0.15	+0.6
4,655,256	-		HGI48_RS20850	0.15	+0.8
4,655,256	-		HGI48_RS20850	0.15	+0.0
4,655,256	-		HGI48_RS20850	0.15	-0.1
4,655,256	-		HGI48_RS20850	0.15	+0.6
4,655,266	+		HGI48_RS20850	0.15	+2.0
4,655,266	+		HGI48_RS20850	0.15	+0.0
4,655,266	+		HGI48_RS20850	0.15	+1.0
4,655,266	+		HGI48_RS20850	0.15	+1.0
4,655,267	-		HGI48_RS20850	0.15	-2.4
4,655,267	-		HGI48_RS20850	0.15	+0.0
4,655,267	-		HGI48_RS20850	0.15	+1.3
4,655,267	-		HGI48_RS20850	0.15	-1.3
4,655,267	-		HGI48_RS20850	0.15	+0.0
4,655,267	-		HGI48_RS20850	0.15	+0.6
4,655,267	-		HGI48_RS20850	0.15	-0.2
4,655,267	-		HGI48_RS20850	0.15	+2.8
4,655,267	-		HGI48_RS20850	0.15	-2.0
4,655,333	+				-0.6
4,655,333	+		HGI48_RS20850	0.17	-1.5
4,655,333	+		HGI48_RS20850	0.17	+0.4
4,655,333	+		HGI48_RS20850	0.17	-0.0
4,655,333	+		HGI48_RS20850	0.17	+0.2
4,655,334	-		HGI48_RS20850	0.17	-0.3
4,655,334	-				+3.2
4,655,334	-		HGI48_RS20850	0.17	+0.5
4,655,334	-		HGI48_RS20850	0.17	-1.4
4,655,334	-		HGI48_RS20850	0.17	+1.3
4,655,334	-		HGI48_RS20850	0.17	+1.5
4,655,425	+		HGI48_RS20850	0.19	+0.0
4,655,425	+		HGI48_RS20850	0.19	-0.8
4,655,426	-		HGI48_RS20850	0.19	+0.3
4,655,426	-		HGI48_RS20850	0.19	-1.2
4,655,426	-		HGI48_RS20850	0.19	-0.5
4,655,426	-		HGI48_RS20850	0.19	-2.3
4,655,458	-		HGI48_RS20850	0.20	+0.0
4,655,458	-		HGI48_RS20850	0.20	+0.0
4,655,476	-		HGI48_RS20850	0.20	-0.3
4,655,478	-		HGI48_RS20850	0.20	+1.3
4,655,559	+		HGI48_RS20850	0.22	-1.6
4,655,598	+		HGI48_RS20850	0.23	-0.0
4,655,598	+		HGI48_RS20850	0.23	-0.1
4,655,598	+		HGI48_RS20850	0.23	-1.3
4,655,598	+		HGI48_RS20850	0.23	-0.7
4,655,598	+		HGI48_RS20850	0.23	-1.8
4,655,599	-		HGI48_RS20850	0.23	-2.8
4,655,599	-		HGI48_RS20850	0.23	+0.2
4,655,599	-		HGI48_RS20850	0.23	-1.3
4,655,599	-		HGI48_RS20850	0.23	-0.9
4,655,599	-				-0.6
4,655,599	-		HGI48_RS20850	0.23	-0.2
4,655,599	-		HGI48_RS20850	0.23	-0.2
4,655,599	-		HGI48_RS20850	0.23	-1.4
4,655,647	-		HGI48_RS20850	0.25	-0.9
4,655,647	-		HGI48_RS20850	0.25	+2.0
4,655,653	+		HGI48_RS20850	0.25	+1.0
4,655,653	+		HGI48_RS20850	0.25	+0.4
4,655,653	+		HGI48_RS20850	0.25	-1.0
4,655,654	-		HGI48_RS20850	0.25	+0.2