Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03730 and HGI48_RS03735 are separated by 44 nucleotides HGI48_RS03735 and HGI48_RS03740 are separated by 528 nucleotides
HGI48_RS03730: HGI48_RS03730 - CoA-acylating methylmalonate-semialdehyde dehydrogenase, at 792,313 to 793,824
_RS03730
HGI48_RS03735: HGI48_RS03735 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing), at 793,869 to 795,800
_RS03735
HGI48_RS03740: HGI48_RS03740 - inositol 2-dehydrogenase, at 796,329 to 797,315
_RS03740
Position (kb) 793
794
795
796 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 792.906 kb on - strand, within HGI48_RS03730 at 792.910 kb on - strand at 792.910 kb on - strand at 792.910 kb on - strand, within HGI48_RS03730 at 793.006 kb on + strand, within HGI48_RS03730 at 793.006 kb on + strand, within HGI48_RS03730 at 793.007 kb on - strand, within HGI48_RS03730 at 793.007 kb on - strand, within HGI48_RS03730 at 793.012 kb on + strand, within HGI48_RS03730 at 793.013 kb on - strand, within HGI48_RS03730 at 793.074 kb on + strand, within HGI48_RS03730 at 793.074 kb on + strand, within HGI48_RS03730 at 793.074 kb on + strand, within HGI48_RS03730 at 793.074 kb on + strand, within HGI48_RS03730 at 793.075 kb on - strand, within HGI48_RS03730 at 793.075 kb on - strand, within HGI48_RS03730 at 793.325 kb on - strand at 793.326 kb on + strand, within HGI48_RS03730 at 793.327 kb on - strand, within HGI48_RS03730 at 793.327 kb on - strand, within HGI48_RS03730 at 793.405 kb on + strand, within HGI48_RS03730 at 793.405 kb on + strand, within HGI48_RS03730 at 793.406 kb on - strand, within HGI48_RS03730 at 793.406 kb on - strand, within HGI48_RS03730 at 793.406 kb on - strand, within HGI48_RS03730 at 793.406 kb on - strand, within HGI48_RS03730 at 793.457 kb on - strand at 793.544 kb on - strand at 793.563 kb on - strand, within HGI48_RS03730 at 793.629 kb on + strand, within HGI48_RS03730 at 793.708 kb on + strand at 793.709 kb on - strand at 793.709 kb on - strand at 793.733 kb on - strand at 793.822 kb on + strand at 793.874 kb on + strand at 793.874 kb on + strand at 793.874 kb on + strand at 793.875 kb on - strand at 793.875 kb on - strand at 793.875 kb on - strand at 793.926 kb on + strand at 793.926 kb on + strand at 793.926 kb on + strand at 793.926 kb on + strand at 794.058 kb on - strand at 794.121 kb on + strand, within HGI48_RS03735 at 794.121 kb on + strand, within HGI48_RS03735 at 794.195 kb on + strand, within HGI48_RS03735 at 794.291 kb on + strand at 794.291 kb on + strand, within HGI48_RS03735 at 794.291 kb on + strand, within HGI48_RS03735 at 794.292 kb on - strand, within HGI48_RS03735 at 794.294 kb on + strand, within HGI48_RS03735 at 794.485 kb on + strand, within HGI48_RS03735 at 794.636 kb on + strand, within HGI48_RS03735 at 794.636 kb on + strand, within HGI48_RS03735 at 794.637 kb on - strand, within HGI48_RS03735 at 795.090 kb on + strand, within HGI48_RS03735 at 795.143 kb on - strand, within HGI48_RS03735 at 795.143 kb on - strand, within HGI48_RS03735 at 795.240 kb on + strand, within HGI48_RS03735 at 795.240 kb on + strand, within HGI48_RS03735 at 795.240 kb on + strand, within HGI48_RS03735 at 795.241 kb on - strand, within HGI48_RS03735 at 795.241 kb on - strand, within HGI48_RS03735 at 795.252 kb on + strand, within HGI48_RS03735 at 795.252 kb on + strand, within HGI48_RS03735 at 795.253 kb on - strand, within HGI48_RS03735 at 795.253 kb on - strand, within HGI48_RS03735 at 795.258 kb on + strand, within HGI48_RS03735 at 795.258 kb on + strand, within HGI48_RS03735 at 795.273 kb on + strand, within HGI48_RS03735 at 795.274 kb on - strand, within HGI48_RS03735 at 795.274 kb on - strand, within HGI48_RS03735 at 795.327 kb on + strand, within HGI48_RS03735 at 795.328 kb on - strand, within HGI48_RS03735 at 795.351 kb on + strand, within HGI48_RS03735 at 795.351 kb on + strand, within HGI48_RS03735 at 795.352 kb on - strand, within HGI48_RS03735 at 795.352 kb on - strand, within HGI48_RS03735 at 795.403 kb on + strand, within HGI48_RS03735 at 795.446 kb on + strand, within HGI48_RS03735 at 795.446 kb on + strand, within HGI48_RS03735 at 795.446 kb on + strand, within HGI48_RS03735 at 795.446 kb on + strand, within HGI48_RS03735 at 795.447 kb on - strand, within HGI48_RS03735 at 795.447 kb on - strand, within HGI48_RS03735 at 795.772 kb on + strand at 795.772 kb on + strand at 795.773 kb on - strand at 795.773 kb on - strand at 795.795 kb on + strand at 795.795 kb on + strand at 795.795 kb on + strand at 795.796 kb on - strand at 795.796 kb on - strand at 795.798 kb on + strand at 795.799 kb on - strand at 795.799 kb on - strand at 795.799 kb on - strand at 795.799 kb on - strand at 795.884 kb on + strand at 795.885 kb on - strand at 795.907 kb on - strand at 796.010 kb on - strand at 796.049 kb on - strand at 796.082 kb on + strand at 796.082 kb on + strand at 796.082 kb on + strand at 796.083 kb on - strand at 796.085 kb on + strand at 796.098 kb on + strand at 796.098 kb on + strand at 796.099 kb on - strand at 796.166 kb on + strand at 796.177 kb on + strand at 796.177 kb on + strand at 796.177 kb on + strand at 796.177 kb on + strand at 796.178 kb on - strand at 796.178 kb on - strand at 796.178 kb on - strand at 796.262 kb on + strand at 796.262 kb on + strand at 796.263 kb on - strand at 796.263 kb on - strand at 796.263 kb on - strand at 796.287 kb on + strand at 796.335 kb on - strand at 796.414 kb on - strand at 796.464 kb on + strand, within HGI48_RS03740 at 796.464 kb on + strand, within HGI48_RS03740 at 796.464 kb on + strand at 796.465 kb on - strand, within HGI48_RS03740 at 796.514 kb on - strand, within HGI48_RS03740 at 796.769 kb on + strand, within HGI48_RS03740 at 796.769 kb on + strand at 796.770 kb on - strand, within HGI48_RS03740 at 796.770 kb on - strand, within HGI48_RS03740
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 792,906 - HGI48_RS03730 0.39 +1.2 792,910 - +1.8 792,910 - +2.2 792,910 - HGI48_RS03730 0.39 -2.3 793,006 + HGI48_RS03730 0.46 -0.5 793,006 + HGI48_RS03730 0.46 +0.8 793,007 - HGI48_RS03730 0.46 -1.8 793,007 - HGI48_RS03730 0.46 -0.4 793,012 + HGI48_RS03730 0.46 -1.2 793,013 - HGI48_RS03730 0.46 -0.9 793,074 + HGI48_RS03730 0.50 +0.1 793,074 + HGI48_RS03730 0.50 -1.0 793,074 + HGI48_RS03730 0.50 -0.9 793,074 + HGI48_RS03730 0.50 +0.7 793,075 - HGI48_RS03730 0.50 -0.2 793,075 - HGI48_RS03730 0.50 +0.7 793,325 - -0.8 793,326 + HGI48_RS03730 0.67 -1.5 793,327 - HGI48_RS03730 0.67 -1.5 793,327 - HGI48_RS03730 0.67 -2.0 793,405 + HGI48_RS03730 0.72 +0.3 793,405 + HGI48_RS03730 0.72 -0.4 793,406 - HGI48_RS03730 0.72 +0.9 793,406 - HGI48_RS03730 0.72 -1.3 793,406 - HGI48_RS03730 0.72 +0.0 793,406 - HGI48_RS03730 0.72 +1.0 793,457 - +2.7 793,544 - -0.2 793,563 - HGI48_RS03730 0.83 +0.6 793,629 + HGI48_RS03730 0.87 -0.3 793,708 + -0.9 793,709 - -1.3 793,709 - -0.6 793,733 - -0.5 793,822 + +1.4 793,874 + +0.7 793,874 + +0.7 793,874 + -0.8 793,875 - -1.2 793,875 - +0.8 793,875 - +1.6 793,926 + -2.6 793,926 + -0.8 793,926 + +0.1 793,926 + -0.5 794,058 - +0.2 794,121 + HGI48_RS03735 0.13 +0.7 794,121 + HGI48_RS03735 0.13 -0.3 794,195 + HGI48_RS03735 0.17 +1.6 794,291 + -0.8 794,291 + HGI48_RS03735 0.22 -1.0 794,291 + HGI48_RS03735 0.22 -1.5 794,292 - HGI48_RS03735 0.22 -1.3 794,294 + HGI48_RS03735 0.22 -0.0 794,485 + HGI48_RS03735 0.32 -0.8 794,636 + HGI48_RS03735 0.40 +0.2 794,636 + HGI48_RS03735 0.40 -1.5 794,637 - HGI48_RS03735 0.40 +0.4 795,090 + HGI48_RS03735 0.63 -1.0 795,143 - HGI48_RS03735 0.66 +1.7 795,143 - HGI48_RS03735 0.66 -1.5 795,240 + HGI48_RS03735 0.71 +1.8 795,240 + HGI48_RS03735 0.71 -1.8 795,240 + HGI48_RS03735 0.71 +0.1 795,241 - HGI48_RS03735 0.71 +0.7 795,241 - HGI48_RS03735 0.71 +0.9 795,252 + HGI48_RS03735 0.72 -2.9 795,252 + HGI48_RS03735 0.72 +0.0 795,253 - HGI48_RS03735 0.72 -2.2 795,253 - HGI48_RS03735 0.72 -0.0 795,258 + HGI48_RS03735 0.72 -1.5 795,258 + HGI48_RS03735 0.72 -0.8 795,273 + HGI48_RS03735 0.73 -0.2 795,274 - HGI48_RS03735 0.73 +0.1 795,274 - HGI48_RS03735 0.73 -0.4 795,327 + HGI48_RS03735 0.75 +1.5 795,328 - HGI48_RS03735 0.76 +1.8 795,351 + HGI48_RS03735 0.77 -0.1 795,351 + HGI48_RS03735 0.77 -0.5 795,352 - HGI48_RS03735 0.77 -0.2 795,352 - HGI48_RS03735 0.77 +0.5 795,403 + HGI48_RS03735 0.79 +0.8 795,446 + HGI48_RS03735 0.82 -0.1 795,446 + HGI48_RS03735 0.82 -0.2 795,446 + HGI48_RS03735 0.82 -0.6 795,446 + HGI48_RS03735 0.82 -0.5 795,447 - HGI48_RS03735 0.82 -0.8 795,447 - HGI48_RS03735 0.82 +0.6 795,772 + +0.8 795,772 + -1.2 795,773 - -2.2 795,773 - +0.1 795,795 + -0.5 795,795 + -0.1 795,795 + -0.5 795,796 - +0.2 795,796 - +2.0 795,798 + +0.3 795,799 - -1.8 795,799 - -0.8 795,799 - +1.0 795,799 - -1.0 795,884 + +0.2 795,885 - +0.3 795,907 - -2.8 796,010 - -0.2 796,049 - -1.5 796,082 + -1.5 796,082 + -1.0 796,082 + +0.6 796,083 - -1.0 796,085 + -0.0 796,098 + +0.1 796,098 + +0.8 796,099 - +0.3 796,166 + +0.8 796,177 + +1.8 796,177 + -0.8 796,177 + -1.8 796,177 + -0.3 796,178 - +0.8 796,178 - +0.3 796,178 - -1.5 796,262 + -1.1 796,262 + -1.5 796,263 - -0.2 796,263 - -0.2 796,263 - -0.5 796,287 + +0.0 796,335 - -0.1 796,414 - +0.8 796,464 + HGI48_RS03740 0.14 +0.8 796,464 + HGI48_RS03740 0.14 -0.0 796,464 + +0.2 796,465 - HGI48_RS03740 0.14 -1.3 796,514 - HGI48_RS03740 0.19 +0.4 796,769 + HGI48_RS03740 0.45 -1.9 796,769 + -0.8 796,770 - HGI48_RS03740 0.45 -0.3 796,770 - HGI48_RS03740 0.45 -1.0
Or see this region's nucleotide sequence