Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS21210 and HGI48_RS21215 are separated by 7 nucleotides HGI48_RS21215 and HGI48_RS21220 are separated by 222 nucleotides HGI48_RS21220 and HGI48_RS21225 are separated by 373 nucleotides
HGI48_RS21210: HGI48_RS21210 - D-tyrosyl-tRNA(Tyr) deacylase, at 4,734,327 to 4,734,764
_RS21210
HGI48_RS21215: HGI48_RS21215 - glucose-1-phosphatase, at 4,734,772 to 4,735,383
_RS21215
HGI48_RS21220: HGI48_RS21220 - ribosome-dependent GTPase TypA, at 4,735,606 to 4,737,429
_RS21220
HGI48_RS21225: HGI48_RS21225 - glutamate--ammonia ligase, at 4,737,803 to 4,739,212
_RS21225
Position (kb) 4735
4736
4737
4738 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4734.630 kb on + strand, within HGI48_RS21210 at 4734.631 kb on - strand, within HGI48_RS21210 at 4734.753 kb on + strand at 4734.753 kb on + strand at 4734.754 kb on - strand at 4734.764 kb on + strand at 4734.765 kb on - strand at 4734.773 kb on + strand at 4734.773 kb on + strand at 4734.773 kb on + strand at 4734.773 kb on + strand at 4734.774 kb on - strand at 4734.774 kb on - strand at 4734.786 kb on + strand at 4734.787 kb on - strand at 4734.787 kb on - strand at 4734.787 kb on - strand at 4734.817 kb on + strand at 4734.817 kb on + strand at 4734.818 kb on - strand at 4734.818 kb on - strand at 4734.818 kb on - strand at 4734.818 kb on - strand at 4734.818 kb on - strand at 4734.818 kb on - strand at 4734.944 kb on + strand, within HGI48_RS21215 at 4734.945 kb on - strand, within HGI48_RS21215 at 4734.989 kb on + strand, within HGI48_RS21215 at 4734.989 kb on + strand, within HGI48_RS21215 at 4734.990 kb on - strand, within HGI48_RS21215 at 4734.990 kb on - strand, within HGI48_RS21215 at 4734.990 kb on - strand, within HGI48_RS21215 at 4734.990 kb on - strand, within HGI48_RS21215 at 4735.060 kb on - strand, within HGI48_RS21215 at 4735.069 kb on + strand, within HGI48_RS21215 at 4735.069 kb on + strand, within HGI48_RS21215 at 4735.069 kb on + strand at 4735.069 kb on + strand, within HGI48_RS21215 at 4735.069 kb on + strand, within HGI48_RS21215 at 4735.069 kb on + strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.070 kb on - strand, within HGI48_RS21215 at 4735.072 kb on + strand, within HGI48_RS21215 at 4735.072 kb on + strand, within HGI48_RS21215 at 4735.129 kb on + strand, within HGI48_RS21215 at 4735.359 kb on + strand at 4735.360 kb on - strand at 4735.363 kb on + strand at 4735.363 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.374 kb on + strand at 4735.376 kb on + strand at 4735.376 kb on + strand at 4735.376 kb on + strand at 4735.376 kb on + strand at 4735.376 kb on + strand at 4735.376 kb on + strand at 4735.377 kb on - strand at 4735.377 kb on - strand at 4735.377 kb on - strand at 4735.377 kb on - strand at 4735.377 kb on - strand at 4735.377 kb on - strand at 4735.397 kb on + strand at 4735.418 kb on + strand at 4735.462 kb on + strand at 4735.462 kb on + strand at 4735.463 kb on - strand at 4735.463 kb on - strand at 4735.463 kb on - strand at 4735.465 kb on + strand at 4735.465 kb on + strand at 4735.524 kb on - strand at 4735.573 kb on + strand at 4735.587 kb on + strand at 4735.587 kb on + strand at 4735.608 kb on - strand at 4735.874 kb on + strand, within HGI48_RS21220 at 4735.874 kb on + strand at 4735.875 kb on - strand, within HGI48_RS21220 at 4736.033 kb on + strand, within HGI48_RS21220 at 4736.109 kb on - strand, within HGI48_RS21220 at 4736.120 kb on - strand, within HGI48_RS21220 at 4736.269 kb on - strand, within HGI48_RS21220 at 4736.456 kb on + strand, within HGI48_RS21220 at 4736.501 kb on + strand, within HGI48_RS21220 at 4736.501 kb on + strand, within HGI48_RS21220 at 4736.502 kb on - strand, within HGI48_RS21220 at 4736.502 kb on - strand, within HGI48_RS21220 at 4736.502 kb on - strand, within HGI48_RS21220 at 4736.569 kb on - strand, within HGI48_RS21220 at 4736.569 kb on - strand, within HGI48_RS21220 at 4736.780 kb on + strand, within HGI48_RS21220 at 4736.780 kb on + strand, within HGI48_RS21220 at 4736.781 kb on - strand, within HGI48_RS21220 at 4736.781 kb on - strand, within HGI48_RS21220 at 4736.789 kb on + strand, within HGI48_RS21220 at 4736.901 kb on + strand, within HGI48_RS21220 at 4736.940 kb on - strand, within HGI48_RS21220 at 4736.940 kb on - strand at 4737.145 kb on + strand, within HGI48_RS21220 at 4737.145 kb on + strand, within HGI48_RS21220 at 4737.339 kb on + strand at 4737.400 kb on - strand at 4737.450 kb on - strand at 4737.468 kb on + strand at 4737.469 kb on - strand at 4737.469 kb on - strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.474 kb on + strand at 4737.475 kb on - strand at 4737.475 kb on - strand at 4737.475 kb on - strand at 4737.477 kb on + strand at 4737.561 kb on - strand at 4737.561 kb on - strand at 4737.561 kb on - strand at 4737.561 kb on - strand at 4737.593 kb on + strand at 4737.639 kb on + strand at 4737.639 kb on + strand at 4737.640 kb on - strand at 4737.640 kb on - strand at 4737.687 kb on + strand at 4737.688 kb on - strand at 4737.688 kb on - strand at 4737.688 kb on - strand at 4737.688 kb on - strand at 4737.699 kb on + strand at 4737.721 kb on + strand at 4737.721 kb on + strand at 4737.723 kb on + strand at 4737.732 kb on + strand at 4737.810 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,734,630 + HGI48_RS21210 0.69 +1.9 4,734,631 - HGI48_RS21210 0.69 -1.0 4,734,753 + -2.4 4,734,753 + +1.7 4,734,754 - -1.3 4,734,764 + +0.3 4,734,765 - -2.8 4,734,773 + +1.0 4,734,773 + +1.4 4,734,773 + -1.3 4,734,773 + -0.4 4,734,774 - -0.2 4,734,774 - -0.2 4,734,786 + -1.6 4,734,787 - -0.5 4,734,787 - +0.3 4,734,787 - -1.4 4,734,817 + -1.0 4,734,817 + +1.8 4,734,818 - +0.2 4,734,818 - -1.0 4,734,818 - +2.2 4,734,818 - -1.0 4,734,818 - +0.0 4,734,818 - +1.3 4,734,944 + HGI48_RS21215 0.28 +2.4 4,734,945 - HGI48_RS21215 0.28 -0.6 4,734,989 + HGI48_RS21215 0.35 +0.5 4,734,989 + HGI48_RS21215 0.35 +0.0 4,734,990 - HGI48_RS21215 0.36 -0.6 4,734,990 - HGI48_RS21215 0.36 -1.0 4,734,990 - HGI48_RS21215 0.36 +0.0 4,734,990 - HGI48_RS21215 0.36 +1.0 4,735,060 - HGI48_RS21215 0.47 +0.2 4,735,069 + HGI48_RS21215 0.49 +0.6 4,735,069 + HGI48_RS21215 0.49 +0.9 4,735,069 + +2.3 4,735,069 + HGI48_RS21215 0.49 +0.8 4,735,069 + HGI48_RS21215 0.49 +0.3 4,735,069 + HGI48_RS21215 0.49 +0.2 4,735,070 - HGI48_RS21215 0.49 +1.2 4,735,070 - HGI48_RS21215 0.49 +1.6 4,735,070 - HGI48_RS21215 0.49 -1.8 4,735,070 - HGI48_RS21215 0.49 +0.1 4,735,070 - HGI48_RS21215 0.49 -2.0 4,735,070 - HGI48_RS21215 0.49 +1.4 4,735,072 + HGI48_RS21215 0.49 +1.3 4,735,072 + HGI48_RS21215 0.49 +0.0 4,735,129 + HGI48_RS21215 0.58 +1.1 4,735,359 + +2.0 4,735,360 - +0.6 4,735,363 + +0.2 4,735,363 + +0.8 4,735,374 + -1.1 4,735,374 + -1.0 4,735,374 + +1.8 4,735,374 + +1.4 4,735,374 + +0.1 4,735,374 + +1.8 4,735,374 + +3.4 4,735,376 + +1.7 4,735,376 + -1.6 4,735,376 + +0.8 4,735,376 + -2.0 4,735,376 + -0.2 4,735,376 + +0.0 4,735,377 - +1.8 4,735,377 - +0.2 4,735,377 - +1.0 4,735,377 - +0.4 4,735,377 - -2.7 4,735,377 - +4.7 4,735,397 + -0.2 4,735,418 + -0.6 4,735,462 + -0.1 4,735,462 + -0.5 4,735,463 - -1.0 4,735,463 - -2.4 4,735,463 - -1.3 4,735,465 + +0.1 4,735,465 + +1.6 4,735,524 - -1.0 4,735,573 + -1.3 4,735,587 + -1.6 4,735,587 + -0.3 4,735,608 - -1.6 4,735,874 + HGI48_RS21220 0.15 +0.8 4,735,874 + +1.0 4,735,875 - HGI48_RS21220 0.15 +0.3 4,736,033 + HGI48_RS21220 0.23 -1.0 4,736,109 - HGI48_RS21220 0.28 -0.2 4,736,120 - HGI48_RS21220 0.28 +1.3 4,736,269 - HGI48_RS21220 0.36 +1.9 4,736,456 + HGI48_RS21220 0.47 +0.6 4,736,501 + HGI48_RS21220 0.49 -1.0 4,736,501 + HGI48_RS21220 0.49 -0.9 4,736,502 - HGI48_RS21220 0.49 -0.3 4,736,502 - HGI48_RS21220 0.49 -1.0 4,736,502 - HGI48_RS21220 0.49 -1.3 4,736,569 - HGI48_RS21220 0.53 -1.0 4,736,569 - HGI48_RS21220 0.53 -1.0 4,736,780 + HGI48_RS21220 0.64 +0.0 4,736,780 + HGI48_RS21220 0.64 -1.0 4,736,781 - HGI48_RS21220 0.64 +1.0 4,736,781 - HGI48_RS21220 0.64 -0.3 4,736,789 + HGI48_RS21220 0.65 +1.7 4,736,901 + HGI48_RS21220 0.71 -0.1 4,736,940 - HGI48_RS21220 0.73 -2.6 4,736,940 - +2.0 4,737,145 + HGI48_RS21220 0.84 -1.7 4,737,145 + HGI48_RS21220 0.84 -0.6 4,737,339 + +0.8 4,737,400 - +0.4 4,737,450 - +1.0 4,737,468 + -0.6 4,737,469 - -1.3 4,737,469 - +2.0 4,737,474 + -3.1 4,737,474 + -2.5 4,737,474 + -0.8 4,737,474 + +0.0 4,737,474 + -1.6 4,737,474 + -1.6 4,737,474 + +0.4 4,737,475 - +0.0 4,737,475 - -0.6 4,737,475 - +2.0 4,737,477 + +0.9 4,737,561 - +0.4 4,737,561 - +0.7 4,737,561 - -0.5 4,737,561 - -0.1 4,737,593 + +1.0 4,737,639 + -1.0 4,737,639 + +0.0 4,737,640 - +0.1 4,737,640 - -1.4 4,737,687 + -0.0 4,737,688 - +1.0 4,737,688 - -0.3 4,737,688 - -0.3 4,737,688 - -0.2 4,737,699 + +2.0 4,737,721 + +1.3 4,737,721 + -1.8 4,737,723 + +2.4 4,737,732 + +0.0 4,737,810 + +1.4
Or see this region's nucleotide sequence