Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00420

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
103,976	+				-1.2
104,033	+				+0.3
104,124	-				+2.9
104,124	-				+0.1
104,124	-				-1.3
104,153	-				-0.4
104,153	-				-2.8
104,153	-				-0.9
104,176	+				+1.1
104,176	+				-1.8
104,176	+				+0.8
104,176	+				+1.4
104,177	-				+0.9
104,209	-				-1.8
104,209	-				-1.5
104,209	-				-1.1
104,209	-				+2.6
104,209	-				-1.5
104,212	+				+0.2
104,212	+				+0.6
104,212	+				-0.2
104,212	+				-1.8
104,212	+				-1.4
104,212	+				-0.9
104,212	+				+1.5
104,212	+				-0.1
104,213	-				+2.2
104,213	-				-0.8
104,213	-				-0.6
104,213	-				-0.5
104,213	-				-0.2
104,213	-				+0.8
104,213	-				-0.3
104,214	+				-1.3
104,215	-				-1.3
104,215	-				-0.4
104,215	-				-1.4
104,215	-				+0.4
104,215	-				+0.1
104,254	+				+1.2
104,254	+				-0.7
104,254	+				+0.2
104,263	+				+2.0
104,275	+				+0.9
104,310	+		HGI48_RS00415	0.11	-0.3
104,310	+		HGI48_RS00415	0.11	-1.8
104,310	+		HGI48_RS00415	0.11	+0.5
104,311	-		HGI48_RS00415	0.11	-1.9
104,311	-		HGI48_RS00415	0.11	-0.6
104,311	-		HGI48_RS00415	0.11	-0.2
104,311	-		HGI48_RS00415	0.11	+0.6
104,311	-		HGI48_RS00415	0.11	-0.8
104,311	-		HGI48_RS00415	0.11	-0.9
104,320	+				+2.1
104,320	+		HGI48_RS00415	0.13	-0.4
104,320	+		HGI48_RS00415	0.13	+0.5
104,321	-		HGI48_RS00415	0.13	+0.1
104,321	-		HGI48_RS00415	0.13	+0.1
104,321	-		HGI48_RS00415	0.13	-0.7
104,336	+		HGI48_RS00415	0.15	-0.9
104,336	+		HGI48_RS00415	0.15	-0.8
104,336	+		HGI48_RS00415	0.15	+1.1
104,336	+		HGI48_RS00415	0.15	+1.1
104,337	-		HGI48_RS00415	0.15	+1.4
104,337	-		HGI48_RS00415	0.15	-0.5
104,337	-		HGI48_RS00415	0.15	-0.2
104,337	-		HGI48_RS00415	0.15	+1.1
104,445	+		HGI48_RS00415	0.30	+0.8
104,445	+		HGI48_RS00415	0.30	-0.7
104,445	+		HGI48_RS00415	0.30	+2.2
104,445	+		HGI48_RS00415	0.30	+1.6
104,445	+		HGI48_RS00415	0.30	+0.6
104,445	+		HGI48_RS00415	0.30	+0.1
104,445	+		HGI48_RS00415	0.30	-1.9
104,445	+		HGI48_RS00415	0.30	-0.9
104,445	+		HGI48_RS00415	0.30	-1.1
104,446	-		HGI48_RS00415	0.30	+0.1
104,446	-				-0.5
104,446	-		HGI48_RS00415	0.30	+1.8
104,446	-		HGI48_RS00415	0.30	-2.3
104,500	+		HGI48_RS00415	0.38	-1.8
104,501	-		HGI48_RS00415	0.38	+0.6
104,567	+		HGI48_RS00415	0.47	-0.9
104,567	+		HGI48_RS00415	0.47	+1.1
104,568	-		HGI48_RS00415	0.48	+0.6
104,568	-		HGI48_RS00415	0.48	-1.3
104,789	-		HGI48_RS00415	0.79	-0.4
104,789	-		HGI48_RS00415	0.79	-0.9
104,789	-		HGI48_RS00415	0.79	-0.9
104,789	-		HGI48_RS00415	0.79	-0.4
104,789	-				+1.1
104,789	-		HGI48_RS00415	0.79	+0.9
104,789	-		HGI48_RS00415	0.79	-1.9
104,789	-		HGI48_RS00415	0.79	+0.7
104,950	+				+1.3
104,951	-				+1.4
105,051	+				+0.5
105,051	+				-0.5
105,052	-				+1.1
105,057	+				+2.2
105,058	-				+1.5
105,058	-				+0.6
105,082	-				-0.9
105,180	+				-0.9
105,180	+				-2.1
105,181	-				+0.1
105,181	-				-1.9
105,218	+		HGI48_RS00420	0.11	-0.3
105,219	-		HGI48_RS00420	0.11	+0.9
105,277	-		HGI48_RS00420	0.14	-0.3
105,302	+		HGI48_RS00420	0.15	-1.3
105,302	+		HGI48_RS00420	0.15	+1.1
105,302	+		HGI48_RS00420	0.15	+1.1
105,303	-		HGI48_RS00420	0.15	+2.1
105,303	-		HGI48_RS00420	0.15	-2.5
105,309	-		HGI48_RS00420	0.15	+0.3
105,309	-		HGI48_RS00420	0.15	+0.5
105,309	-				-0.5
105,314	+		HGI48_RS00420	0.15	+1.3
105,315	-		HGI48_RS00420	0.15	+1.5
105,388	+				+0.1
105,397	-		HGI48_RS00420	0.19	-0.2
105,440	+		HGI48_RS00420	0.20	+1.9
105,441	-		HGI48_RS00420	0.20	+0.6
105,485	+		HGI48_RS00420	0.22	-0.1
105,488	+		HGI48_RS00420	0.22	+0.8
105,488	+		HGI48_RS00420	0.22	+0.9
105,539	+		HGI48_RS00420	0.24	+0.1
105,540	-				+2.5
105,540	-		HGI48_RS00420	0.25	-2.1
105,589	-		HGI48_RS00420	0.27	-1.5
105,594	+		HGI48_RS00420	0.27	+0.1
105,595	-		HGI48_RS00420	0.27	-1.1
105,671	+		HGI48_RS00420	0.30	+2.4
105,671	+		HGI48_RS00420	0.30	+1.5
105,676	-		HGI48_RS00420	0.30	+1.7
105,689	+		HGI48_RS00420	0.31	+1.2
105,690	-		HGI48_RS00420	0.31	-0.3
105,754	+		HGI48_RS00420	0.33	-0.9
105,806	+		HGI48_RS00420	0.35	+1.7
105,806	+				+1.6
105,820	+		HGI48_RS00420	0.36	+0.7
105,977	-				+2.1
105,995	-		HGI48_RS00420	0.43	-0.9
106,050	-		HGI48_RS00420	0.45	+1.1
106,050	-		HGI48_RS00420	0.45	-1.3
106,050	-		HGI48_RS00420	0.45	+0.6
106,112	-		HGI48_RS00420	0.48	-1.3
106,250	+		HGI48_RS00420	0.54	+0.3
106,251	-				+2.1
106,254	-		HGI48_RS00420	0.54	+0.5
106,257	-				+1.1
106,257	-		HGI48_RS00420	0.54	+1.6
106,320	+		HGI48_RS00420	0.57	-0.8
106,325	+				-0.5
106,325	+		HGI48_RS00420	0.57	-0.9
106,325	+		HGI48_RS00420	0.57	-0.1
106,326	-		HGI48_RS00420	0.57	+0.8
106,353	-		HGI48_RS00420	0.58	-1.2
106,357	-		HGI48_RS00420	0.58	+0.1
106,415	+		HGI48_RS00420	0.60	-0.1
106,591	+		HGI48_RS00420	0.68	-0.8
106,592	-		HGI48_RS00420	0.68	-0.5
106,592	-		HGI48_RS00420	0.68	-2.1
106,592	-				+0.1
106,685	+		HGI48_RS00420	0.72	-0.8
106,686	-				+0.1
106,701	-		HGI48_RS00420	0.72	-0.3
106,701	-				+1.1
106,715	+		HGI48_RS00420	0.73	+0.5
106,740	+		HGI48_RS00420	0.74	-0.4
106,741	-		HGI48_RS00420	0.74	-2.4
106,768	+				+1.1
106,769	-		HGI48_RS00420	0.75	+1.1
106,811	+		HGI48_RS00420	0.77	+0.7
106,845	-		HGI48_RS00420	0.78	+0.7
106,853	+		HGI48_RS00420	0.78	+1.3
106,853	+		HGI48_RS00420	0.78	-1.8
106,883	-		HGI48_RS00420	0.80	+0.8
106,909	+		HGI48_RS00420	0.81	+2.5
106,909	+		HGI48_RS00420	0.81	+1.5
106,909	+		HGI48_RS00420	0.81	-0.7
106,910	-		HGI48_RS00420	0.81	-0.9
106,911	+		HGI48_RS00420	0.81	+1.5
106,912	-		HGI48_RS00420	0.81	+0.8
106,912	-		HGI48_RS00420	0.81	+1.5
106,912	-		HGI48_RS00420	0.81	+0.2
106,912	-		HGI48_RS00420	0.81	+0.7
106,913	+		HGI48_RS00420	0.81	+1.1
106,913	+		HGI48_RS00420	0.81	+0.4
106,914	-		HGI48_RS00420	0.81	+1.4
106,914	-		HGI48_RS00420	0.81	+0.1
106,914	-		HGI48_RS00420	0.81	+0.7
106,988	+		HGI48_RS00420	0.84	-0.9
107,024	+		HGI48_RS00420	0.85	-0.9
107,025	-		HGI48_RS00420	0.85	-1.5
107,027	+		HGI48_RS00420	0.86	+1.4
107,051	+		HGI48_RS00420	0.87	-0.4
107,056	-		HGI48_RS00420	0.87	-0.8
107,098	+				-0.5
107,098	+		HGI48_RS00420	0.88	+0.2
107,098	+				+0.1
107,099	-		HGI48_RS00420	0.89	+0.2
107,099	-				+2.1
107,113	+		HGI48_RS00420	0.89	-0.9
107,137	+				-0.8
107,137	+				-1.3
107,144	+				-2.3
107,144	+				-0.8
107,144	+				+0.1
107,145	-				-0.2
107,145	-				+0.1
107,145	-				-1.8
107,145	-				-1.6
107,235	-				-1.2
107,262	-				+1.6
107,365	+				+0.8
107,371	-				-0.0
107,377	-				-1.1
107,377	-				+0.7
107,377	-				-1.3
107,419	+				-0.5
107,419	+				+0.5
107,419	+				-1.4
107,420	-				+1.1
107,420	-				+0.7
107,420	-				-1.9
107,420	-				+0.8
107,420	-				-0.6
107,420	-				+0.5
107,420	-				+0.1
107,420	-				-2.6
107,420	-				-2.5
107,420	-				+1.2
107,420	-				-0.5
107,420	-				-0.5
107,420	-				+0.5
107,437	+				-0.9
107,438	-				+2.6
107,438	-				+1.1
107,444	+				-0.2
107,504	-				+0.7
107,543	+				+1.5
107,543	+				-0.8
107,544	-				+0.5
107,544	-				-0.1
107,544	-				+1.1
107,544	-				-0.2
107,544	-				+2.1
107,544	-				-1.9
107,544	-				-0.3
107,593	+				-0.7
107,593	+				+1.3
107,593	+				+1.6
107,593	+				+0.8
107,594	-				+1.9
107,594	-				+1.1
107,594	-				+0.9
107,610	+				-1.5
107,611	-				-0.9
107,691	-		HGI48_RS00425	0.12	+1.5
107,698	-		HGI48_RS00425	0.12	-0.0
107,698	-		HGI48_RS00425	0.12	+0.9
107,698	-		HGI48_RS00425	0.12	-1.4
107,749	+		HGI48_RS00425	0.16	-0.6
107,749	+		HGI48_RS00425	0.16	-1.5
107,750	-		HGI48_RS00425	0.16	+0.6
107,750	-		HGI48_RS00425	0.16	+0.5
107,766	+		HGI48_RS00425	0.17	-2.4
107,767	-				+0.5
107,767	-		HGI48_RS00425	0.17	+1.5
107,767	-		HGI48_RS00425	0.17	+1.8
107,846	+		HGI48_RS00425	0.23	-1.5
107,847	-		HGI48_RS00425	0.23	-1.3
108,335	+		HGI48_RS00425	0.58	+0.1
108,335	+				+0.5
108,336	-		HGI48_RS00425	0.58	+1.2