Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21580

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,814,345	+				-2.5
4,814,370	-				+2.3
4,814,370	-				+2.3
4,814,382	+				+0.2
4,814,382	+				-2.0
4,814,382	+				+0.7
4,814,382	+				+2.1
4,814,382	+				+1.5
4,814,382	+				-1.5
4,814,382	+				-0.3
4,814,382	+				-1.5
4,814,382	+				-0.3
4,814,382	+				+0.8
4,814,382	+				+1.4
4,814,383	-				-2.0
4,814,383	-				-0.2
4,814,383	-				-0.8
4,814,383	-				+1.2
4,814,383	-				+1.1
4,814,383	-				-0.8
4,814,383	-				-0.2
4,814,383	-				-1.5
4,814,383	-				+1.0
4,814,383	-				+0.4
4,814,383	-				-1.6
4,814,383	-				-2.0
4,814,383	-				+1.7
4,814,384	+				+0.0
4,814,384	+				-2.2
4,814,384	+				-2.6
4,814,385	-				+0.4
4,814,385	-				+0.7
4,814,385	-				-2.4
4,814,385	-				-1.2
4,814,385	-				-2.8
4,814,385	-				-0.2
4,814,385	-				+1.4
4,814,385	-				-2.0
4,814,385	-				+0.6
4,814,385	-				+2.6
4,814,443	+				-0.2
4,814,443	+				+0.2
4,814,444	-				-1.2
4,814,444	-				-1.2
4,814,495	+				+0.3
4,814,495	+				-0.8
4,814,496	-				+0.2
4,814,496	-				+0.2
4,814,496	-				-0.2
4,814,542	+		HGI48_RS21575	0.13	+0.2
4,814,542	+		HGI48_RS21575	0.13	-0.1
4,814,543	-		HGI48_RS21575	0.14	-0.2
4,814,611	+		HGI48_RS21575	0.22	-0.8
4,814,612	-				+1.4
4,814,619	-		HGI48_RS21575	0.23	-0.8
4,814,619	-		HGI48_RS21575	0.23	+0.3
4,814,619	-				-0.2
4,814,619	-		HGI48_RS21575	0.23	-1.1
4,814,619	-		HGI48_RS21575	0.23	+0.7
4,814,628	-		HGI48_RS21575	0.24	+1.5
4,814,718	+		HGI48_RS21575	0.36	-1.8
4,814,718	+		HGI48_RS21575	0.36	+0.5
4,814,719	-		HGI48_RS21575	0.36	-2.5
4,814,762	+		HGI48_RS21575	0.42	+0.3
4,814,763	-		HGI48_RS21575	0.42	+1.8
4,814,763	-		HGI48_RS21575	0.42	+1.9
4,814,770	+		HGI48_RS21575	0.43	-0.2
4,814,771	-		HGI48_RS21575	0.43	-1.2
4,814,771	-		HGI48_RS21575	0.43	+1.4
4,815,047	+				+1.4
4,815,047	+		HGI48_RS21575	0.78	+0.0
4,815,047	+		HGI48_RS21575	0.78	-1.2
4,815,047	+		HGI48_RS21575	0.78	+0.6
4,815,047	+		HGI48_RS21575	0.78	-0.2
4,815,048	-				-0.8
4,815,048	-		HGI48_RS21575	0.79	+0.6
4,815,048	-		HGI48_RS21575	0.79	-0.1
4,815,048	-		HGI48_RS21575	0.79	-0.2
4,815,048	-		HGI48_RS21575	0.79	+0.1
4,815,048	-				+0.8
4,815,049	+		HGI48_RS21575	0.79	+0.0
4,815,050	-		HGI48_RS21575	0.79	+0.7
4,815,050	-		HGI48_RS21575	0.79	+0.3
4,815,050	-		HGI48_RS21575	0.79	+1.3
4,815,070	+		HGI48_RS21575	0.81	+0.8
4,815,070	+		HGI48_RS21575	0.81	+1.0
4,815,070	+		HGI48_RS21575	0.81	+0.5
4,815,071	-		HGI48_RS21575	0.81	-0.8
4,815,112	+		HGI48_RS21575	0.87	+0.2
4,815,112	+				+1.8
4,815,112	+		HGI48_RS21575	0.87	-1.2
4,815,112	+		HGI48_RS21575	0.87	-0.5
4,815,113	-		HGI48_RS21575	0.87	+1.6
4,815,116	+		HGI48_RS21575	0.87	-2.5
4,815,116	+		HGI48_RS21575	0.87	-2.0
4,815,191	+				+0.8
4,815,191	+				+0.3
4,815,191	+				-0.2
4,815,191	+				+2.1
4,815,191	+				-0.8
4,815,191	+				+1.8
4,815,191	+				-2.5
4,815,191	+				-1.2
4,815,191	+				+1.7
4,815,191	+				-1.6
4,815,191	+				-0.5
4,815,191	+				-0.6
4,815,191	+				-1.2
4,815,192	-				-1.2
4,815,217	-				-0.6
4,815,224	+				+1.8
4,815,224	+				+1.8
4,815,224	+				-0.6
4,815,224	+				-1.1
4,815,224	+				+0.7
4,815,224	+				-0.5
4,815,957	+				-1.8
4,815,957	+				-1.8
4,815,958	-				-2.0
4,815,968	+				-0.8
4,815,968	+				+0.5
4,815,968	+				+0.4
4,815,969	-				+0.2
4,815,969	-				+1.2
4,815,969	-				-1.2
4,815,969	-				+1.4
4,815,973	-				-1.0
4,815,973	-				-1.0
4,816,029	+				-1.2
4,816,044	-				+0.1
4,816,044	-				+0.8
4,816,044	-				+0.9
4,816,044	-				+0.1
4,816,044	-				+0.7
4,816,090	-				+0.8
4,816,091	+				+0.3
4,816,091	+				-0.0
4,816,091	+				-0.2
4,816,091	+				+0.6
4,816,092	-				+0.7
4,816,092	-				-1.5
4,816,092	-				-1.2
4,816,092	-				+0.0
4,816,096	+				-0.4
4,816,096	+				-0.2
4,816,096	+				+1.2
4,816,096	+				-0.9
4,816,096	+				-2.5
4,816,096	+				-0.4
4,816,096	+				+2.3
4,816,096	+				+1.2
4,816,096	+				-1.5
4,816,096	+				+0.2
4,816,096	+				-1.5
4,816,096	+				-0.2
4,816,096	+				+0.6
4,816,096	+				-0.5
4,816,096	+				-2.4
4,816,096	+				-0.8
4,816,097	-				+0.5
4,816,097	-				-0.4
4,816,097	-				-0.8
4,816,097	-				+0.8
4,816,097	-				-2.0
4,816,097	-				-2.5
4,816,097	-				-0.2
4,816,097	-				-1.1
4,816,097	-				+1.7
4,816,097	-				+0.2
4,816,097	-				+1.2
4,816,097	-				-0.8
4,816,097	-				-1.8
4,816,097	-				+1.2
4,816,097	-				-0.6
4,816,097	-				+0.5
4,816,104	+				-0.4
4,816,104	+				-0.8
4,816,105	-				+1.2
4,816,105	-				-1.2
4,816,105	-				-1.2
4,816,105	-				+1.5
4,816,105	-				-0.0
4,816,108	-				-2.4
4,816,117	+				+1.2
4,816,117	+				+0.4
4,816,118	-				+0.1
4,816,118	-				-1.1
4,816,118	-				-0.2
4,816,123	-				-1.2
4,816,123	-				-0.9
4,816,167	+				-1.5
4,816,368	+		HGI48_RS21585	0.17	-0.6
4,816,369	-		HGI48_RS21585	0.17	-0.1
4,816,369	-		HGI48_RS21585	0.17	-1.6
4,816,401	+		HGI48_RS21585	0.21	-0.5
4,816,402	-		HGI48_RS21585	0.21	+1.6
4,816,450	+		HGI48_RS21585	0.27	+0.1
4,816,450	+		HGI48_RS21585	0.27	+0.3
4,816,450	+		HGI48_RS21585	0.27	-0.4
4,816,451	-				+4.6
4,816,451	-		HGI48_RS21585	0.27	+0.8
4,816,482	-		HGI48_RS21585	0.30	+0.2
4,816,575	+		HGI48_RS21585	0.42	-1.5
4,816,576	-		HGI48_RS21585	0.42	-2.0
4,816,768	+		HGI48_RS21585	0.65	-1.8
4,816,768	+		HGI48_RS21585	0.65	-0.2
4,816,768	+		HGI48_RS21585	0.65	-2.4
4,816,768	+		HGI48_RS21585	0.65	+1.4
4,816,768	+		HGI48_RS21585	0.65	-1.0
4,816,768	+		HGI48_RS21585	0.65	+1.0
4,816,769	-		HGI48_RS21585	0.65	+0.7
4,816,769	-		HGI48_RS21585	0.65	+0.5
4,816,769	-		HGI48_RS21585	0.65	+0.6
4,816,769	-		HGI48_RS21585	0.65	-2.6
4,816,769	-		HGI48_RS21585	0.65	-0.5
4,816,769	-		HGI48_RS21585	0.65	-2.4
4,816,769	-		HGI48_RS21585	0.65	+0.6
4,816,875	+		HGI48_RS21585	0.77	-1.5
4,816,875	+		HGI48_RS21585	0.77	-2.0
4,816,875	+		HGI48_RS21585	0.77	-0.7
4,816,876	-		HGI48_RS21585	0.78	+1.0
4,816,925	-		HGI48_RS21585	0.83	-2.5