Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09770

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,108,982	+		HGI48_RS09765	0.72	-2.7
2,109,208	+		HGI48_RS09765	0.84	-0.3
2,109,210	+		HGI48_RS09765	0.84	-0.7
2,109,241	+		HGI48_RS09765	0.85	+0.5
2,109,242	-		HGI48_RS09765	0.85	+0.5
2,109,316	+		HGI48_RS09765	0.89	+0.1
2,109,372	+				-1.2
2,109,372	+				+0.8
2,109,373	-				+1.9
2,109,373	-				+1.5
2,109,373	-				+0.7
2,109,394	-				+1.2
2,109,394	-				+0.7
2,109,427	+				-0.7
2,109,428	-				+0.1
2,109,440	+				-2.0
2,109,455	+				-1.2
2,109,461	+				-1.0
2,109,478	-				-0.5
2,109,485	-				-0.5
2,109,485	-				-1.2
2,109,533	-				-0.1
2,109,533	-				+1.6
2,109,533	-				+0.1
2,109,549	+				-1.2
2,109,564	-				+1.2
2,109,596	+				-1.2
2,109,596	+				+2.5
2,109,597	-				+0.8
2,109,597	-				+0.3
2,109,597	-				+1.0
2,109,597	-				+2.1
2,109,634	+				+1.3
2,109,635	-				-1.7
2,109,635	-				-0.2
2,109,653	+				+2.1
2,109,654	-				+0.1
2,109,654	-				+0.5
2,109,654	-				-0.2
2,109,654	-				+1.6
2,109,654	-				-2.5
2,109,659	+				+1.1
2,109,659	+				+1.3
2,109,659	+				+0.9
2,109,659	+				+0.1
2,109,660	-				-0.1
2,109,660	-				-2.8
2,109,809	+				-0.1
2,109,810	-				+0.7
2,110,019	+				+1.2
2,110,020	-				+1.0
2,110,040	+				-0.7
2,110,041	-				-2.0
2,110,077	+		HGI48_RS09770	0.14	-2.1
2,110,100	+		HGI48_RS09770	0.17	+0.3
2,110,101	-		HGI48_RS09770	0.17	+0.2
2,110,115	+		HGI48_RS09770	0.19	-0.1
2,110,178	-		HGI48_RS09770	0.28	+1.0
2,110,217	-		HGI48_RS09770	0.33	-2.5
2,110,242	+				-1.2
2,110,242	+		HGI48_RS09770	0.37	-0.5
2,110,278	+		HGI48_RS09770	0.41	-2.5
2,110,278	+		HGI48_RS09770	0.41	-1.2
2,110,278	+		HGI48_RS09770	0.41	+1.0
2,110,279	-		HGI48_RS09770	0.42	+0.6
2,110,279	-		HGI48_RS09770	0.42	-2.8
2,110,279	-		HGI48_RS09770	0.42	+1.7
2,110,279	-		HGI48_RS09770	0.42	-1.1
2,110,279	-		HGI48_RS09770	0.42	-2.5
2,110,279	-		HGI48_RS09770	0.42	-0.7
2,110,279	-		HGI48_RS09770	0.42	-0.1
2,110,279	-		HGI48_RS09770	0.42	+0.1
2,110,279	-		HGI48_RS09770	0.42	-2.2
2,110,279	-		HGI48_RS09770	0.42	-1.0
2,110,282	+		HGI48_RS09770	0.42	-2.7
2,110,282	+		HGI48_RS09770	0.42	-2.0
2,110,282	+				-1.2
2,110,359	+		HGI48_RS09770	0.53	+0.1
2,110,359	+		HGI48_RS09770	0.53	+1.4
2,110,359	+		HGI48_RS09770	0.53	-2.0
2,110,360	-		HGI48_RS09770	0.53	+0.8
2,110,360	-		HGI48_RS09770	0.53	-2.8
2,110,494	+		HGI48_RS09770	0.71	-0.5
2,110,494	+		HGI48_RS09770	0.71	-0.2
2,110,494	+		HGI48_RS09770	0.71	+0.6
2,110,494	+		HGI48_RS09770	0.71	+0.7
2,110,495	-		HGI48_RS09770	0.71	+0.8
2,110,495	-		HGI48_RS09770	0.71	-1.0
2,110,524	+		HGI48_RS09770	0.75	-2.5
2,110,524	+				+1.3
2,110,524	+		HGI48_RS09770	0.75	-0.1
2,110,524	+		HGI48_RS09770	0.75	+0.4
2,110,525	-				+1.3
2,110,525	-		HGI48_RS09770	0.75	-0.5
2,110,525	-		HGI48_RS09770	0.75	+0.5
2,110,649	+				-2.5
2,110,649	+				-1.7
2,110,649	+				-2.7
2,110,649	+				-0.2
2,110,649	+				+1.0
2,110,649	+				+0.9
2,110,650	-				-0.0
2,110,650	-				-2.8
2,110,650	-				-1.1
2,110,650	-				+0.7
2,110,650	-				+0.8
2,110,650	-				+1.8
2,110,711	+				+0.3
2,110,729	-				-0.8
2,110,730	+				-0.7
2,110,730	+				-1.5
2,110,730	+				-1.2
2,110,730	+				+1.9
2,110,731	-				+1.1
2,110,731	-				-0.9
2,110,818	+				-2.5
2,110,818	+				-0.3
2,110,819	-				+1.0
2,110,891	+				+0.3
2,110,891	+		HGI48_RS09775	0.10	-1.7
2,110,892	-		HGI48_RS09775	0.10	-1.7
2,110,892	-		HGI48_RS09775	0.10	+1.9
2,110,968	+		HGI48_RS09775	0.15	+0.7
2,110,968	+		HGI48_RS09775	0.15	-0.7
2,110,968	+		HGI48_RS09775	0.15	-0.2
2,110,968	+		HGI48_RS09775	0.15	+0.6
2,110,969	-		HGI48_RS09775	0.15	+0.5
2,110,969	-		HGI48_RS09775	0.15	-0.8
2,110,969	-		HGI48_RS09775	0.15	-3.0
2,110,969	-		HGI48_RS09775	0.15	-1.5
2,110,986	+		HGI48_RS09775	0.16	+1.8
2,110,987	-		HGI48_RS09775	0.16	-0.3
2,110,987	-		HGI48_RS09775	0.16	-0.4
2,110,996	+		HGI48_RS09775	0.17	-0.1
2,111,008	+		HGI48_RS09775	0.18	-0.4
2,111,008	+		HGI48_RS09775	0.18	+0.5
2,111,008	+				+1.7
2,111,009	-		HGI48_RS09775	0.18	-0.4
2,111,030	+		HGI48_RS09775	0.19	-1.4
2,111,041	+		HGI48_RS09775	0.20	-1.5
2,111,041	+		HGI48_RS09775	0.20	-2.0
2,111,042	-		HGI48_RS09775	0.20	+1.2
2,111,142	+		HGI48_RS09775	0.26	-3.8
2,111,143	-		HGI48_RS09775	0.26	+0.8
2,111,143	-		HGI48_RS09775	0.26	-2.8
2,111,195	-				-0.7
2,111,239	-		HGI48_RS09775	0.32	-1.7
2,111,264	+		HGI48_RS09775	0.34	-0.0
2,111,264	+		HGI48_RS09775	0.34	-0.1
2,111,387	-				-0.7
2,111,387	-		HGI48_RS09775	0.41	+0.9
2,111,439	-				-0.3
2,111,506	+		HGI48_RS09775	0.49	+0.2
2,111,507	-		HGI48_RS09775	0.49	-0.7
2,111,507	-		HGI48_RS09775	0.49	+0.6
2,111,507	-				+2.3
2,111,571	+		HGI48_RS09775	0.53	+1.1
2,111,571	+		HGI48_RS09775	0.53	+1.1
2,111,571	+				+0.3
2,111,572	-		HGI48_RS09775	0.53	-0.3
2,111,661	+		HGI48_RS09775	0.59	-3.3
2,111,661	+		HGI48_RS09775	0.59	+0.4
2,111,661	+		HGI48_RS09775	0.59	-2.0
2,111,661	+		HGI48_RS09775	0.59	-1.7
2,111,661	+		HGI48_RS09775	0.59	+0.4
2,111,662	-		HGI48_RS09775	0.59	+0.1
2,111,662	-		HGI48_RS09775	0.59	-1.1