Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08845

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,902,040	+		HGI48_RS08840	0.55	+0.4
1,902,791	+				-2.1
1,902,829	+				-2.1
1,902,829	+				-2.3
1,902,830	-				-2.5
1,902,830	-				+0.7
1,902,830	-				+0.6
1,902,830	-				-0.6
1,902,845	+				-1.2
1,902,845	+				+2.8
1,902,846	-				+1.4
1,902,861	+				-0.1
1,902,861	+				+0.2
1,902,861	+				-0.3
1,902,862	-				-1.6
1,902,862	-				+0.5
1,902,984	-				+0.5
1,902,984	-				-1.6
1,903,158	+		HGI48_RS08845	0.13	+0.4
1,903,190	-		HGI48_RS08845	0.15	-0.2
1,903,190	-				-1.2
1,903,212	+				+1.1
1,903,292	-		HGI48_RS08845	0.19	-2.6
1,903,392	+		HGI48_RS08845	0.23	+1.7
1,903,392	+		HGI48_RS08845	0.23	-0.5
1,903,393	-				-0.6
1,903,393	-		HGI48_RS08845	0.24	-2.0
1,903,393	-				+1.9
1,903,396	+		HGI48_RS08845	0.24	+0.7
1,903,396	+		HGI48_RS08845	0.24	-1.6
1,903,397	-		HGI48_RS08845	0.24	-2.0
1,903,397	-		HGI48_RS08845	0.24	-0.0
1,903,397	-		HGI48_RS08845	0.24	-0.6
1,903,397	-		HGI48_RS08845	0.24	-0.2
1,903,397	-				-1.2
1,903,490	-		HGI48_RS08845	0.28	-1.5
1,903,490	-		HGI48_RS08845	0.28	-0.4
1,903,490	-		HGI48_RS08845	0.28	+0.9
1,903,499	-		HGI48_RS08845	0.28	-0.6
1,903,526	-		HGI48_RS08845	0.29	-0.1
1,903,526	-		HGI48_RS08845	0.29	-2.2
1,903,539	+				+1.6
1,903,567	+		HGI48_RS08845	0.31	-0.4
1,903,567	+		HGI48_RS08845	0.31	+0.5
1,903,567	+		HGI48_RS08845	0.31	+0.1
1,903,567	+		HGI48_RS08845	0.31	-0.4
1,903,567	+		HGI48_RS08845	0.31	-1.0
1,903,567	+		HGI48_RS08845	0.31	-1.2
1,903,567	+		HGI48_RS08845	0.31	-2.2
1,903,568	-		HGI48_RS08845	0.31	+0.6
1,903,568	-		HGI48_RS08845	0.31	-0.4
1,903,568	-		HGI48_RS08845	0.31	+0.2
1,903,568	-		HGI48_RS08845	0.31	-0.3
1,903,568	-		HGI48_RS08845	0.31	+0.6
1,903,568	-				+0.8
1,903,580	-				-1.2
1,903,743	+		HGI48_RS08845	0.39	+0.1
1,903,744	-		HGI48_RS08845	0.39	-1.0
1,903,744	-		HGI48_RS08845	0.39	-1.6
1,903,744	-		HGI48_RS08845	0.39	+0.4
1,903,828	+		HGI48_RS08845	0.42	-0.1
1,903,828	+		HGI48_RS08845	0.42	+0.4
1,903,840	+		HGI48_RS08845	0.43	-1.2
1,903,840	+		HGI48_RS08845	0.43	+0.6
1,903,840	+		HGI48_RS08845	0.43	+0.9
1,903,841	-		HGI48_RS08845	0.43	-0.4
1,903,841	-		HGI48_RS08845	0.43	-2.0
1,903,922	-		HGI48_RS08845	0.46	-2.2
1,903,922	-		HGI48_RS08845	0.46	-2.4
1,903,948	+		HGI48_RS08845	0.48	+0.2
1,903,948	+		HGI48_RS08845	0.48	+0.1
1,903,948	+		HGI48_RS08845	0.48	+1.8
1,903,949	-		HGI48_RS08845	0.48	-2.4
1,903,949	-		HGI48_RS08845	0.48	-0.6
1,904,108	+		HGI48_RS08845	0.54	-0.1
1,904,188	+				+1.4
1,904,189	-		HGI48_RS08845	0.58	-2.0
1,904,189	-		HGI48_RS08845	0.58	+1.0
1,904,189	-		HGI48_RS08845	0.58	+1.1
1,904,202	+		HGI48_RS08845	0.59	-2.2
1,904,216	-		HGI48_RS08845	0.59	-0.1
1,904,217	+		HGI48_RS08845	0.59	-1.5
1,904,217	+		HGI48_RS08845	0.59	-2.4
1,904,218	-		HGI48_RS08845	0.59	-0.6
1,904,218	-		HGI48_RS08845	0.59	-2.0
1,904,218	-		HGI48_RS08845	0.59	+1.1
1,904,233	+		HGI48_RS08845	0.60	+0.0
1,904,290	+		HGI48_RS08845	0.62	+0.0
1,904,291	-		HGI48_RS08845	0.62	+0.6
1,904,306	+		HGI48_RS08845	0.63	-2.6
1,904,307	-		HGI48_RS08845	0.63	-0.9
1,904,385	-		HGI48_RS08845	0.66	-3.0
1,904,627	-		HGI48_RS08845	0.77	-2.2
1,904,686	+		HGI48_RS08845	0.79	-1.2
1,904,687	-				+0.8
1,904,687	-				+2.5
1,904,687	-		HGI48_RS08845	0.80	+1.0
1,904,687	-		HGI48_RS08845	0.80	-0.1
1,904,687	-		HGI48_RS08845	0.80	+0.1
1,904,687	-		HGI48_RS08845	0.80	-2.4
1,904,689	+				+1.4
1,904,689	+		HGI48_RS08845	0.80	-2.6
1,904,690	-				+1.1
1,904,740	+		HGI48_RS08845	0.82	-0.1
1,904,740	+		HGI48_RS08845	0.82	+0.9
1,904,740	+		HGI48_RS08845	0.82	-1.6
1,904,740	+		HGI48_RS08845	0.82	+1.2
1,904,741	-		HGI48_RS08845	0.82	+0.6
1,904,741	-		HGI48_RS08845	0.82	+0.5
1,904,741	-		HGI48_RS08845	0.82	+1.2
1,904,741	-		HGI48_RS08845	0.82	-2.0
1,904,752	+		HGI48_RS08845	0.82	-0.5
1,904,803	+		HGI48_RS08845	0.85	-0.3
1,904,803	+		HGI48_RS08845	0.85	+0.9
1,904,929	+				-2.2
1,904,930	-				-0.4
1,904,930	-				-2.0
1,905,147	+				-1.1
1,905,147	+				-0.8
1,905,147	+				+1.2
1,905,148	-				-1.2
1,905,148	-				+0.7
1,905,148	-				-1.2
1,905,148	-				-1.2
1,905,148	-				+0.4
1,905,157	+				-0.2
1,905,206	+				+0.8
1,905,206	+				+0.6
1,905,206	+				-0.1
1,905,206	+				+0.9
1,905,211	-				+0.4
1,905,221	+				+2.5
1,905,222	-				+0.4
1,905,222	-				-2.2
1,905,222	-				+0.1
1,905,222	-				+0.8
1,905,241	-				-2.0
1,905,342	-				+0.4
1,905,352	+				+0.4
1,905,352	+				-1.6
1,905,353	-				+1.7
1,905,353	-				-2.0
1,905,353	-				-1.5
1,905,354	+				-2.2
1,905,355	-				-0.1
1,905,355	-				-0.1
1,905,355	-				+0.9
1,905,430	+				+1.0
1,905,431	-				+0.5
1,905,453	+				-2.2
1,905,476	-				+2.2
1,905,492	+				-1.6
1,905,493	-				-0.4
1,905,493	-				-2.0
1,905,493	-				+0.2
1,905,493	-				+0.4
1,905,508	+				+0.9
1,905,508	+				-0.6
1,905,509	-				+0.6
1,905,599	+				+0.8
1,905,606	+				+1.1
1,905,606	+				-1.2
1,905,607	-				-0.1
1,905,607	-				-0.1
1,905,607	-				-0.9
1,905,607	-				-1.6
1,905,607	-				-3.0
1,905,619	+				-3.3
1,905,620	-				-3.0
1,905,620	-				-0.6
1,905,633	-				+0.7
1,905,633	-				+0.9
1,905,646	-				+0.7
1,905,783	-				-2.0
1,905,928	-				-0.6
1,906,089	+		HGI48_RS08850	0.17	+1.2
1,906,089	+		HGI48_RS08850	0.17	+0.9
1,906,090	-		HGI48_RS08850	0.17	+1.4
1,906,090	-		HGI48_RS08850	0.17	+0.6
1,906,157	+		HGI48_RS08850	0.20	-0.6
1,906,158	-		HGI48_RS08850	0.20	-0.0