Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS21645

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,830,057	-				-0.2
4,830,078	+				-1.0
4,830,079	-				-0.2
4,830,079	-				+0.1
4,830,133	+				-0.3
4,830,253	+				+1.7
4,830,253	+		HGI48_RS21640	0.23	+0.2
4,830,254	-		HGI48_RS21640	0.23	-2.3
4,830,254	-		HGI48_RS21640	0.23	+0.4
4,830,325	-		HGI48_RS21640	0.31	-0.3
4,830,443	-		HGI48_RS21640	0.44	-0.2
4,830,453	-		HGI48_RS21640	0.45	-1.3
4,830,550	+		HGI48_RS21640	0.56	+1.3
4,830,594	+				-0.3
4,830,594	+		HGI48_RS21640	0.61	-0.6
4,830,692	-		HGI48_RS21640	0.72	+0.7
4,830,694	-		HGI48_RS21640	0.72	-0.1
4,830,724	-		HGI48_RS21640	0.75	-0.3
4,830,734	-		HGI48_RS21640	0.76	+1.2
4,830,735	+		HGI48_RS21640	0.77	+0.5
4,830,736	-		HGI48_RS21640	0.77	+0.6
4,830,736	-		HGI48_RS21640	0.77	-0.3
4,830,736	-		HGI48_RS21640	0.77	-0.6
4,830,858	+				-0.3
4,830,859	-				-0.1
4,830,859	-				-0.5
4,830,859	-				-1.8
4,830,996	+				-1.4
4,830,997	-				-0.1
4,831,002	-				+0.9
4,831,002	-				+0.3
4,831,002	-				-0.8
4,831,299	+				-0.3
4,831,321	-				-0.9
4,831,335	+		HGI48_RS21645	0.24	-0.2
4,831,335	+		HGI48_RS21645	0.24	-0.5
4,831,335	+		HGI48_RS21645	0.24	+0.2
4,831,336	-		HGI48_RS21645	0.24	+0.2
4,831,441	+		HGI48_RS21645	0.30	+0.3
4,831,671	-		HGI48_RS21645	0.44	+0.3
4,831,671	-		HGI48_RS21645	0.44	+1.0
4,832,376	+		HGI48_RS21645	0.86	+0.1
4,832,376	+		HGI48_RS21645	0.86	-0.1
4,832,377	-		HGI48_RS21645	0.86	-0.4
4,832,377	-		HGI48_RS21645	0.86	-0.2
4,832,470	+				+0.4
4,832,492	-				+0.1
4,832,506	+				-2.1
4,832,506	+				+0.3
4,832,581	+				-1.3
4,832,584	+				+0.4
4,832,584	+				+0.0
4,832,585	-				-0.6
4,832,609	+				+1.0
4,832,609	+				-0.1
4,832,710	+		HGI48_RS21650	0.32	+1.2
4,832,711	-		HGI48_RS21650	0.32	-1.3
4,832,711	-				+0.1
4,832,730	+		HGI48_RS21650	0.38	-0.5
4,832,827	+		HGI48_RS21650	0.66	+1.5
4,832,873	-		HGI48_RS21650	0.80	-0.5
4,832,893	+		HGI48_RS21650	0.86	+0.3
4,833,048	+				+1.3
4,833,049	-		HGI48_RS21655	0.28	+1.4
4,833,110	-		HGI48_RS21655	0.43	-0.3
4,833,135	+		HGI48_RS21655	0.49	-1.1
4,833,158	+		HGI48_RS21655	0.55	-1.6
4,833,276	+		HGI48_RS21655	0.85	-2.5
4,833,287	+				+2.7
4,833,287	+				+2.0
4,833,369	+				+0.4
4,833,370	-				-0.2
4,833,370	-				+1.3
4,833,434	+				+0.3
4,833,442	+				-0.8
4,833,442	+				+1.4
4,833,442	+				-0.9
4,833,442	+				+0.3
4,833,442	+				-0.9
4,833,442	+				+1.3
4,833,442	+				+0.4
4,833,442	+				+0.4
4,833,442	+				+0.6
4,833,442	+				-0.2
4,833,442	+				+1.7
4,833,442	+				-0.3
4,833,443	-				+0.7
4,833,443	-				+1.8
4,833,443	-				+1.1
4,833,443	-				-0.7
4,833,443	-				-0.6
4,833,443	-				-1.3
4,833,443	-				-1.8
4,833,443	-				-0.2
4,833,443	-				-0.3
4,833,443	-				-0.1
4,833,443	-				+0.7
4,833,443	-				-2.5
4,833,447	-				+0.8
4,833,447	-				+0.3
4,833,447	-				-0.9
4,833,510	+		HGI48_RS21660	0.15	+0.4
4,833,510	+		HGI48_RS21660	0.15	-0.7
4,833,510	+		HGI48_RS21660	0.15	+0.3
4,833,540	-		HGI48_RS21660	0.21	+0.7