Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20875

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,664,500	+		HGI48_RS20870	0.57	+1.0
4,664,500	+		HGI48_RS20870	0.57	-0.6
4,664,500	+		HGI48_RS20870	0.57	+1.0
4,664,500	+		HGI48_RS20870	0.57	-0.2
4,664,500	+		HGI48_RS20870	0.57	+0.8
4,664,500	+		HGI48_RS20870	0.57	+0.8
4,664,500	+				-0.3
4,664,500	+		HGI48_RS20870	0.57	-0.3
4,664,501	-		HGI48_RS20870	0.57	+0.1
4,664,501	-		HGI48_RS20870	0.57	-0.1
4,664,501	-		HGI48_RS20870	0.57	-0.1
4,664,651	-		HGI48_RS20870	0.82	-0.4
4,664,651	-		HGI48_RS20870	0.82	+1.3
4,664,651	-		HGI48_RS20870	0.82	-1.6
4,664,682	-		HGI48_RS20870	0.87	-1.9
4,664,746	+				-1.3
4,664,747	-				+0.7
4,664,754	+				-0.1
4,664,766	+				-1.6
4,664,770	+				+0.6
4,664,801	-				+1.7
4,664,801	-				+0.4
4,664,802	+				+0.1
4,664,803	-				+0.8
4,664,848	-				-0.5
4,664,848	-				-2.3
4,664,876	-				+0.7
4,664,896	+				-0.3
4,664,907	+				-1.9
4,664,923	+				+0.2
4,664,941	+				-1.4
4,664,941	+				-0.3
4,664,977	+				+0.1
4,664,977	+				+0.4
4,664,977	+				-1.3
4,664,977	+				+1.2
4,665,030	-				-0.4
4,665,030	-				-1.9
4,665,045	+				-0.5
4,665,046	-				-1.1
4,665,046	-				-1.9
4,665,046	-				+0.4
4,665,046	-				+0.4
4,665,050	+				+0.8
4,665,050	+				-1.3
4,665,074	+				-0.7
4,665,074	+				-0.2
4,665,075	-				+0.2
4,665,078	+				+1.0
4,665,078	+				-1.2
4,665,079	-				-1.6
4,665,104	-				-1.3
4,665,111	+				-1.8
4,665,135	+				-0.3
4,665,136	-				-0.8
4,665,194	+				-0.2
4,665,228	-				-0.1
4,665,298	+				-2.6
4,665,360	+		HGI48_RS20875	0.42	+0.1
4,665,360	+		HGI48_RS20875	0.42	+1.2
4,665,416	+		HGI48_RS20875	0.79	+1.3
4,665,416	+		HGI48_RS20875	0.79	+0.1
4,665,417	-		HGI48_RS20875	0.80	-0.2
4,665,417	-				+0.7
4,665,439	+				+0.7
4,665,440	-				+0.5
4,665,440	-				+0.6
4,665,461	+				-0.1
4,665,461	+				-2.1
4,665,461	+				+0.0
4,665,481	+				-0.1
4,665,482	-				-0.4
4,665,559	-				+0.1
4,665,582	+				-0.1
4,665,626	-				+0.1
4,665,641	-				+1.0
4,665,641	-				+1.3
4,665,641	-				-1.9
4,665,641	-				+0.0
4,665,641	-				+0.2
4,665,645	-				+2.3
4,665,645	-				-1.9
4,665,645	-				-0.8
4,665,648	+				+1.7
4,665,649	-				+0.3
4,665,649	-				+0.4
4,665,696	+				+0.1
4,665,696	+				+0.8
4,665,696	+				+0.2
4,665,707	+				-2.4
4,665,707	+				+1.3
4,665,707	+				-0.1
4,665,707	+				-0.2
4,665,707	+				+1.7
4,665,718	-				+0.7
4,665,773	+				+0.7
4,665,830	+				-0.3
4,665,869	+				-0.0
4,665,870	-				+0.4
4,665,870	-				+0.3
4,665,870	-				-0.9
4,665,921	-		HGI48_RS20880	0.27	-1.5
4,665,921	-				-0.9
4,665,956	+				+0.7
4,665,965	+				+0.7
4,665,966	-				+2.0
4,665,966	-		HGI48_RS20880	0.47	+0.7
4,665,977	+		HGI48_RS20880	0.52	+1.4
4,666,040	+		HGI48_RS20880	0.80	+0.1
4,666,060	+		HGI48_RS20880	0.88	+0.7
4,666,061	-		HGI48_RS20880	0.89	-0.7
4,666,061	-		HGI48_RS20880	0.89	-1.9
4,666,095	+				-0.1
4,666,099	-				-0.5
4,666,102	-				+0.1
4,666,118	+				-0.1
4,666,118	+				+0.1
4,666,122	-				-0.9
4,666,235	-		HGI48_RS20885	0.12	+0.7
4,666,239	-		HGI48_RS20885	0.12	-0.3
4,666,309	+		HGI48_RS20885	0.21	-1.1
4,666,375	-		HGI48_RS20885	0.29	-1.6
4,666,387	-		HGI48_RS20885	0.30	-0.3
4,666,392	-		HGI48_RS20885	0.31	-0.3