Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,424,322	+		HGI48_RS19795	0.62	+0.6
4,424,322	+		HGI48_RS19795	0.62	-0.5
4,424,322	+		HGI48_RS19795	0.62	+0.3
4,424,323	-		HGI48_RS19795	0.62	-1.7
4,424,403	+		HGI48_RS19795	0.65	+0.3
4,424,404	-		HGI48_RS19795	0.65	+0.2
4,424,455	-		HGI48_RS19795	0.67	-0.1
4,424,508	+		HGI48_RS19795	0.69	+1.1
4,424,737	-		HGI48_RS19795	0.79	+0.9
4,424,808	+		HGI48_RS19795	0.82	-0.7
4,424,809	-		HGI48_RS19795	0.82	+0.4
4,424,815	-		HGI48_RS19795	0.82	-0.4
4,424,831	+		HGI48_RS19795	0.83	+0.2
4,424,982	+		HGI48_RS19795	0.89	-0.9
4,425,045	+				-0.1
4,425,045	+				+0.9
4,425,045	+				-1.4
4,425,046	-				-1.4
4,425,046	-				+0.9
4,425,046	-				-0.2
4,425,049	+				-0.7
4,425,049	+				+0.4
4,425,049	+				-1.4
4,425,050	-				+0.4
4,425,050	-				-0.2
4,425,050	-				+0.6
4,425,266	+				+0.3
4,425,266	+				-1.4
4,425,267	-				-0.7
4,425,267	-				-0.9
4,425,267	-				-0.5
4,425,313	+				+0.2
4,425,313	+				-0.7
4,425,313	+				-3.1
4,425,313	+				-1.1
4,425,313	+				-2.2
4,425,313	+				+0.6
4,425,313	+				-1.5
4,425,313	+				-0.9
4,425,314	-				+0.4
4,425,314	-				-1.7
4,425,314	-				+0.5
4,425,314	-				-0.9
4,425,318	+				-0.4
4,425,318	+				-0.9
4,425,318	+				-0.2
4,425,318	+				-1.4
4,425,318	+				-1.4
4,425,318	+				-0.5
4,425,318	+				-0.9
4,425,318	+				-0.4
4,425,319	-				-0.9
4,425,319	-				-1.1
4,425,319	-				-1.4
4,425,319	-				-0.6
4,425,374	+		HGI48_RS19800	0.10	-0.0
4,425,487	+		HGI48_RS19800	0.25	-0.0
4,425,488	-		HGI48_RS19800	0.25	+0.6
4,425,497	+		HGI48_RS19800	0.27	-0.3
4,425,525	+		HGI48_RS19800	0.30	+0.1
4,425,526	-		HGI48_RS19800	0.30	-1.7
4,425,531	+		HGI48_RS19800	0.31	-0.5
4,425,576	+		HGI48_RS19800	0.37	-0.4
4,425,765	+		HGI48_RS19800	0.62	-1.7
4,425,766	-				+2.1
4,425,766	-		HGI48_RS19800	0.62	-0.4
4,425,774	+		HGI48_RS19800	0.63	-0.7
4,425,775	-		HGI48_RS19800	0.63	-1.7
4,425,775	-				+0.1
4,425,855	-		HGI48_RS19800	0.74	-0.9
4,425,999	-				-0.7
4,425,999	-				-0.7
4,425,999	-				-0.1
4,426,110	+				-1.7
4,426,111	-				-0.1
4,426,180	+				-0.4
4,426,181	-				-1.2
4,426,201	+				+1.1
4,426,201	+				-1.2
4,426,232	-				+0.4
4,426,314	+		HGI48_RS19805	0.12	-0.1
4,426,407	+		HGI48_RS19805	0.24	-1.7
4,426,407	+		HGI48_RS19805	0.24	-1.4
4,426,408	-		HGI48_RS19805	0.24	-1.4
4,426,408	-		HGI48_RS19805	0.24	-0.5
4,426,422	+		HGI48_RS19805	0.26	+0.2
4,426,422	+		HGI48_RS19805	0.26	-0.1
4,426,422	+		HGI48_RS19805	0.26	-0.9
4,426,422	+		HGI48_RS19805	0.26	+1.4
4,426,422	+		HGI48_RS19805	0.26	-0.4
4,426,423	-		HGI48_RS19805	0.26	+0.9
4,426,423	-		HGI48_RS19805	0.26	-0.2
4,426,449	+		HGI48_RS19805	0.29	-1.0
4,426,449	+				+2.4
4,426,450	-		HGI48_RS19805	0.29	-1.2
4,426,450	-		HGI48_RS19805	0.29	+0.2
4,426,450	-		HGI48_RS19805	0.29	-1.5
4,426,472	+		HGI48_RS19805	0.32	-1.4
4,426,558	-		HGI48_RS19805	0.42	-0.1
4,426,685	+		HGI48_RS19805	0.57	+1.3
4,426,686	-		HGI48_RS19805	0.58	-1.1
4,426,711	-		HGI48_RS19805	0.61	+0.2
4,426,711	-		HGI48_RS19805	0.61	+0.4
4,426,924	+		HGI48_RS19805	0.86	-0.3
4,426,925	-		HGI48_RS19805	0.87	-0.8
4,426,978	+				-0.1
4,426,978	+				+0.8
4,426,978	+				-0.4
4,426,978	+				+1.4
4,426,978	+				-0.6
4,426,978	+				+0.6
4,426,978	+				+0.4
4,426,978	+				+0.1
4,426,978	+				-0.7
4,426,978	+				+1.4
4,426,979	-				-0.2
4,426,979	-				-0.4
4,426,979	-				+0.2
4,426,979	-				+0.6
4,426,979	-				+0.6
4,426,980	+				+0.5
4,426,981	-				-0.9
4,426,981	-				+2.6
4,426,981	-				-1.7
4,426,981	-				-2.2
4,427,042	-				+0.6