Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19795

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,421,859	+		HGI48_RS19790	0.56	+0.1
4,421,860	-				-0.9
4,421,931	+		HGI48_RS19790	0.59	+0.9
4,421,932	-		HGI48_RS19790	0.59	-0.3
4,421,932	-				+1.1
4,421,932	-		HGI48_RS19790	0.59	-0.5
4,422,019	+		HGI48_RS19790	0.63	-0.9
4,422,020	-		HGI48_RS19790	0.63	-0.7
4,422,075	+		HGI48_RS19790	0.66	+0.1
4,422,075	+		HGI48_RS19790	0.66	+0.6
4,422,075	+		HGI48_RS19790	0.66	+0.1
4,422,076	-		HGI48_RS19790	0.66	+0.8
4,422,192	+		HGI48_RS19790	0.71	-1.9
4,422,193	-		HGI48_RS19790	0.71	+1.6
4,422,193	-		HGI48_RS19790	0.71	-0.7
4,422,229	-		HGI48_RS19790	0.73	-0.1
4,422,229	-				+1.6
4,422,279	-		HGI48_RS19790	0.75	+0.6
4,422,378	+		HGI48_RS19790	0.80	+0.1
4,422,378	+		HGI48_RS19790	0.80	+0.2
4,422,378	+				-0.9
4,422,378	+		HGI48_RS19790	0.80	+0.7
4,422,378	+		HGI48_RS19790	0.80	+0.8
4,422,378	+		HGI48_RS19790	0.80	-2.2
4,422,378	+		HGI48_RS19790	0.80	-0.8
4,422,378	+		HGI48_RS19790	0.80	+1.1
4,422,378	+		HGI48_RS19790	0.80	+0.1
4,422,378	+		HGI48_RS19790	0.80	-1.5
4,422,378	+		HGI48_RS19790	0.80	-0.5
4,422,379	-		HGI48_RS19790	0.80	+0.3
4,422,379	-		HGI48_RS19790	0.80	-0.9
4,422,379	-				-0.4
4,422,379	-		HGI48_RS19790	0.80	-0.8
4,422,379	-		HGI48_RS19790	0.80	+0.2
4,422,379	-		HGI48_RS19790	0.80	-0.1
4,422,436	-		HGI48_RS19790	0.82	-0.7
4,422,468	-		HGI48_RS19790	0.84	-0.8
4,422,586	-				+2.2
4,422,586	-				+0.6
4,422,604	-				-1.9
4,422,631	+				-0.4
4,422,632	-				+1.3
4,422,632	-				-0.2
4,422,632	-				+0.9
4,422,632	-				-0.1
4,422,754	-				-1.4
4,422,763	+				+0.6
4,422,764	-				-0.4
4,422,765	+				-0.9
4,422,765	+				+0.1
4,422,765	+				-0.1
4,422,765	+				-0.7
4,422,765	+				+1.4
4,422,765	+				+2.3
4,422,765	+				+1.0
4,422,765	+				-0.6
4,422,766	-				-0.2
4,422,766	-				-0.9
4,422,766	-				+0.3
4,422,766	-				+0.5
4,422,766	-				+0.3
4,422,770	-				-0.5
4,422,770	-				-2.4
4,422,834	+				+2.1
4,422,951	+				-0.5
4,422,951	+				+0.1
4,422,951	+				-0.3
4,422,952	-				-0.1
4,423,011	+				-0.4
4,423,011	+				+0.8
4,423,011	+				+0.6
4,423,063	+				-2.8
4,423,063	+				-0.6
4,423,112	+		HGI48_RS19795	0.12	+0.1
4,423,113	-		HGI48_RS19795	0.12	-0.4
4,423,135	-		HGI48_RS19795	0.12	-0.4
4,423,135	-		HGI48_RS19795	0.12	-0.1
4,423,147	+		HGI48_RS19795	0.13	-0.1
4,423,148	-		HGI48_RS19795	0.13	-1.4
4,423,148	-		HGI48_RS19795	0.13	-0.1
4,423,148	-				-0.9
4,423,358	-		HGI48_RS19795	0.22	-1.5
4,423,358	-				+0.6
4,423,464	+		HGI48_RS19795	0.26	+0.2
4,423,465	-				+0.1
4,423,465	-		HGI48_RS19795	0.26	-0.7
4,423,465	-		HGI48_RS19795	0.26	+0.4
4,423,468	+		HGI48_RS19795	0.26	+0.8
4,423,468	+		HGI48_RS19795	0.26	+0.0
4,423,469	-				+0.6
4,423,472	-		HGI48_RS19795	0.26	-0.3
4,423,484	+		HGI48_RS19795	0.27	+1.0
4,423,484	+		HGI48_RS19795	0.27	-0.0
4,423,484	+		HGI48_RS19795	0.27	+0.9
4,423,485	-		HGI48_RS19795	0.27	-0.2
4,423,485	-				+0.6
4,423,485	-		HGI48_RS19795	0.27	+0.2
4,423,488	+		HGI48_RS19795	0.27	-1.4
4,423,565	-				+0.1
4,423,566	+		HGI48_RS19795	0.30	-1.4
4,423,567	-		HGI48_RS19795	0.30	-0.5
4,423,567	-		HGI48_RS19795	0.30	+1.0
4,423,567	-		HGI48_RS19795	0.30	-0.1
4,423,567	-		HGI48_RS19795	0.30	-1.7
4,423,608	+		HGI48_RS19795	0.32	+0.6
4,423,608	+		HGI48_RS19795	0.32	-0.4
4,423,609	-		HGI48_RS19795	0.32	-0.0
4,423,867	+				+1.6
4,423,914	+				+0.1
4,423,915	-		HGI48_RS19795	0.45	-0.9
4,423,915	-		HGI48_RS19795	0.45	+1.1
4,424,099	-		HGI48_RS19795	0.52	-0.4
4,424,099	-		HGI48_RS19795	0.52	-1.7
4,424,185	+		HGI48_RS19795	0.56	-0.4
4,424,185	+		HGI48_RS19795	0.56	-1.7
4,424,191	+		HGI48_RS19795	0.56	-0.4
4,424,191	+		HGI48_RS19795	0.56	-0.2
4,424,192	-		HGI48_RS19795	0.56	+0.1
4,424,192	-		HGI48_RS19795	0.56	-0.8
4,424,192	-		HGI48_RS19795	0.56	+0.8
4,424,192	-		HGI48_RS19795	0.56	-0.7
4,424,196	+		HGI48_RS19795	0.56	-0.0
4,424,196	+		HGI48_RS19795	0.56	+1.2
4,424,197	-		HGI48_RS19795	0.56	-0.2
4,424,322	+		HGI48_RS19795	0.62	+0.6
4,424,322	+		HGI48_RS19795	0.62	-0.5
4,424,322	+		HGI48_RS19795	0.62	+0.3
4,424,323	-		HGI48_RS19795	0.62	-1.7
4,424,403	+		HGI48_RS19795	0.65	+0.3
4,424,404	-		HGI48_RS19795	0.65	+0.2
4,424,455	-		HGI48_RS19795	0.67	-0.1
4,424,508	+		HGI48_RS19795	0.69	+1.1
4,424,737	-		HGI48_RS19795	0.79	+0.9
4,424,808	+		HGI48_RS19795	0.82	-0.7
4,424,809	-		HGI48_RS19795	0.82	+0.4
4,424,815	-		HGI48_RS19795	0.82	-0.4
4,424,831	+		HGI48_RS19795	0.83	+0.2
4,424,982	+		HGI48_RS19795	0.89	-0.9
4,425,045	+				-0.1
4,425,045	+				+0.9
4,425,045	+				-1.4
4,425,046	-				-1.4
4,425,046	-				+0.9
4,425,046	-				-0.2
4,425,049	+				-0.7
4,425,049	+				+0.4
4,425,049	+				-1.4
4,425,050	-				+0.4
4,425,050	-				-0.2
4,425,050	-				+0.6
4,425,266	+				+0.3
4,425,266	+				-1.4
4,425,267	-				-0.7
4,425,267	-				-0.9
4,425,267	-				-0.5
4,425,313	+				+0.2
4,425,313	+				-0.7
4,425,313	+				-3.1
4,425,313	+				-1.1
4,425,313	+				-2.2
4,425,313	+				+0.6
4,425,313	+				-1.5
4,425,313	+				-0.9
4,425,314	-				+0.4
4,425,314	-				-1.7
4,425,314	-				+0.5
4,425,314	-				-0.9
4,425,318	+				-0.4
4,425,318	+				-0.9
4,425,318	+				-0.2
4,425,318	+				-1.4
4,425,318	+				-1.4
4,425,318	+				-0.5
4,425,318	+				-0.9
4,425,318	+				-0.4
4,425,319	-				-0.9
4,425,319	-				-1.1
4,425,319	-				-1.4
4,425,319	-				-0.6
4,425,374	+		HGI48_RS19800	0.10	-0.0
4,425,487	+		HGI48_RS19800	0.25	-0.0
4,425,488	-		HGI48_RS19800	0.25	+0.6
4,425,497	+		HGI48_RS19800	0.27	-0.3
4,425,525	+		HGI48_RS19800	0.30	+0.1
4,425,526	-		HGI48_RS19800	0.30	-1.7
4,425,531	+		HGI48_RS19800	0.31	-0.5
4,425,576	+		HGI48_RS19800	0.37	-0.4
4,425,765	+		HGI48_RS19800	0.62	-1.7
4,425,766	-				+2.1
4,425,766	-		HGI48_RS19800	0.62	-0.4
4,425,774	+		HGI48_RS19800	0.63	-0.7
4,425,775	-		HGI48_RS19800	0.63	-1.7
4,425,775	-				+0.1
4,425,855	-		HGI48_RS19800	0.74	-0.9
4,425,999	-				-0.7
4,425,999	-				-0.7
4,425,999	-				-0.1
4,426,110	+				-1.7
4,426,111	-				-0.1
4,426,180	+				-0.4
4,426,181	-				-1.2
4,426,201	+				+1.1
4,426,201	+				-1.2
4,426,232	-				+0.4