Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19770

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,414,945	+		HGI48_RS19765	0.55	-0.0
4,414,945	+		HGI48_RS19765	0.55	+0.9
4,414,946	-		HGI48_RS19765	0.55	-0.9
4,415,050	+				+1.4
4,415,051	-				+1.9
4,415,051	-		HGI48_RS19765	0.61	-0.1
4,415,163	+		HGI48_RS19765	0.67	-0.3
4,415,164	-		HGI48_RS19765	0.67	-0.3
4,415,164	-		HGI48_RS19765	0.67	-0.4
4,415,245	+		HGI48_RS19765	0.72	-0.7
4,415,245	+		HGI48_RS19765	0.72	+0.6
4,415,246	-		HGI48_RS19765	0.72	+1.5
4,415,246	-		HGI48_RS19765	0.72	-0.5
4,415,270	-		HGI48_RS19765	0.74	-0.5
4,415,270	-		HGI48_RS19765	0.74	-0.8
4,415,293	+		HGI48_RS19765	0.75	-0.1
4,415,320	+		HGI48_RS19765	0.76	+0.4
4,415,321	-		HGI48_RS19765	0.77	+0.6
4,415,321	-		HGI48_RS19765	0.77	-0.0
4,415,389	+				+0.1
4,415,390	-		HGI48_RS19765	0.81	+1.4
4,415,390	-		HGI48_RS19765	0.81	+0.7
4,415,462	+		HGI48_RS19765	0.85	-0.5
4,415,462	+		HGI48_RS19765	0.85	+1.0
4,415,463	-		HGI48_RS19765	0.85	-0.2
4,415,463	-		HGI48_RS19765	0.85	+0.5
4,415,463	-		HGI48_RS19765	0.85	+1.1
4,415,463	-				-0.4
4,415,530	-		HGI48_RS19765	0.89	-0.5
4,415,548	-				-0.9
4,415,554	+				+1.2
4,415,554	+				-0.9
4,415,555	-				-0.9
4,415,555	-				-2.7
4,415,555	-				-2.2
4,415,555	-				-0.1
4,415,563	+				-1.5
4,415,564	-				-0.4
4,415,564	-				+0.9
4,415,591	+				-0.7
4,415,592	-				+0.6
4,415,669	+				-0.4
4,415,669	+				+0.6
4,415,670	-				-0.4
4,415,692	+				+1.1
4,415,692	+				-0.5
4,415,693	-				+2.0
4,415,693	-				-0.8
4,415,719	+				-0.5
4,415,719	+				-1.8
4,415,799	+				-0.0
4,415,800	-				+2.6
4,415,800	-				-1.2
4,415,801	+				-2.4
4,415,801	+				-0.1
4,415,801	+				-1.2
4,415,801	+				-0.2
4,415,801	+				-0.5
4,415,802	-				+0.6
4,415,820	+				-0.6
4,415,820	+				-0.2
4,415,820	+				-0.8
4,415,821	-				-0.9
4,415,821	-				+0.1
4,415,821	-				-0.9
4,415,838	+				-0.7
4,415,838	+				+0.8
4,415,838	+				+1.4
4,415,850	-				-0.9
4,415,850	-				-0.1
4,415,855	+				+0.9
4,415,856	-				+0.6
4,415,856	-				-0.0
4,415,872	+				+0.1
4,415,873	-				+0.4
4,415,873	-				+0.2
4,415,889	+				-0.1
4,416,071	-				-0.2
4,416,206	-				-0.9
4,416,377	-		HGI48_RS19770	0.21	+0.1
4,416,379	-				-0.9
4,416,379	-		HGI48_RS19770	0.21	-0.0
4,416,379	-				+1.1
4,416,433	+		HGI48_RS19770	0.23	-1.5
4,416,433	+		HGI48_RS19770	0.23	-1.4
4,416,434	-		HGI48_RS19770	0.23	+0.9
4,416,434	-		HGI48_RS19770	0.23	-0.1
4,416,954	+		HGI48_RS19770	0.46	-0.1
4,416,954	+		HGI48_RS19770	0.46	-0.4
4,416,954	+		HGI48_RS19770	0.46	+0.1
4,416,954	+		HGI48_RS19770	0.46	+0.1
4,416,954	+		HGI48_RS19770	0.46	-0.6
4,416,954	+				+0.6
4,416,954	+		HGI48_RS19770	0.46	-0.4
4,416,954	+		HGI48_RS19770	0.46	-0.1
4,416,955	-		HGI48_RS19770	0.46	-0.0
4,416,955	-		HGI48_RS19770	0.46	+0.1
4,416,955	-		HGI48_RS19770	0.46	-1.4
4,416,955	-		HGI48_RS19770	0.46	+0.6
4,416,955	-				-0.9
4,416,955	-		HGI48_RS19770	0.46	-2.5
4,417,154	-		HGI48_RS19770	0.54	+0.2
4,417,811	+		HGI48_RS19770	0.82	+0.1
4,417,923	+		HGI48_RS19770	0.87	+0.1
4,417,923	+		HGI48_RS19770	0.87	-0.7
4,418,214	+				+0.2
4,418,215	-				+0.3
4,418,215	-				-2.3
4,418,215	-				+1.3
4,418,224	+				+1.0
4,418,264	+				-0.5
4,418,286	+				-0.0
4,418,289	+				-0.6
4,418,289	+				+0.4
4,418,289	+				+0.1
4,418,289	+				+0.3
4,418,289	+				+0.6
4,418,290	-				-1.1
4,418,290	-				-0.7
4,418,290	-				-1.4
4,418,290	-				-2.7
4,418,377	+				-0.8
4,418,377	+				-2.5
4,418,378	-				-0.2
4,418,378	-				+1.6
4,418,408	+		HGI48_RS19775	0.11	+0.6
4,418,782	+				-0.4
4,418,783	-		HGI48_RS19775	0.60	+0.4
4,418,856	-		HGI48_RS19775	0.69	+0.4
4,419,051	+				-0.4
4,419,051	+				-0.4
4,419,051	+				+0.3
4,419,051	+				-0.2
4,419,051	+				+2.6
4,419,051	+				-0.4
4,419,052	-				-0.1
4,419,052	-				-2.2
4,419,052	-				-0.0
4,419,052	-				+0.3
4,419,052	-				-0.4
4,419,052	-				-1.4
4,419,083	+				-0.8
4,419,083	+				+0.2
4,419,083	+				-0.9
4,419,084	-				-0.6
4,419,096	+				+0.4
4,419,096	+				-1.4
4,419,096	+				-0.7
4,419,096	+				-0.5
4,419,096	+				+0.6
4,419,096	+				-0.9
4,419,096	+				-1.7
4,419,096	+				+0.2
4,419,096	+				+0.1
4,419,096	+				+0.5
4,419,096	+				+1.6
4,419,096	+				-1.2
4,419,096	+				+0.0
4,419,097	-				-0.4
4,419,097	-				+1.2
4,419,097	-				-0.4
4,419,097	-				+0.1
4,419,097	-				+0.2
4,419,097	-				+0.5
4,419,097	-				-0.9
4,419,097	-				+0.1
4,419,097	-				-0.9
4,419,098	+				-0.6
4,419,098	+				+0.2
4,419,098	+				-1.4
4,419,098	+				+0.1
4,419,098	+				-1.9
4,419,098	+				-2.7
4,419,098	+				+0.6
4,419,098	+				-0.9
4,419,098	+				-1.9
4,419,099	-				+1.2
4,419,099	-				-0.4
4,419,099	-				+0.1
4,419,099	-				+1.3
4,419,099	-				+0.4
4,419,099	-				+0.6
4,419,218	+				-0.2
4,419,224	-				-0.5