Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19230

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,317,510	+		HGI48_RS19225	0.28	-0.7
4,317,511	-		HGI48_RS19225	0.28	-0.6
4,317,697	+		HGI48_RS19225	0.42	-0.2
4,317,710	+		HGI48_RS19225	0.43	+0.9
4,317,711	-		HGI48_RS19225	0.43	-0.8
4,317,739	-		HGI48_RS19225	0.46	+0.9
4,317,739	-		HGI48_RS19225	0.46	-0.0
4,317,739	-		HGI48_RS19225	0.46	+0.3
4,317,739	-		HGI48_RS19225	0.46	+0.3
4,317,741	+		HGI48_RS19225	0.46	+0.9
4,317,741	+		HGI48_RS19225	0.46	-0.7
4,317,741	+		HGI48_RS19225	0.46	-1.1
4,317,741	+		HGI48_RS19225	0.46	+0.9
4,317,741	+		HGI48_RS19225	0.46	+0.5
4,317,741	+		HGI48_RS19225	0.46	-1.4
4,317,741	+		HGI48_RS19225	0.46	-0.2
4,317,741	+		HGI48_RS19225	0.46	+0.1
4,317,741	+				+0.6
4,317,741	+		HGI48_RS19225	0.46	-0.4
4,317,742	-		HGI48_RS19225	0.46	-0.4
4,317,742	-		HGI48_RS19225	0.46	-2.0
4,317,742	-		HGI48_RS19225	0.46	-0.1
4,317,742	-		HGI48_RS19225	0.46	+0.6
4,317,742	-		HGI48_RS19225	0.46	-1.7
4,317,742	-		HGI48_RS19225	0.46	-0.8
4,317,742	-		HGI48_RS19225	0.46	-1.4
4,317,742	-		HGI48_RS19225	0.46	-1.4
4,317,742	-		HGI48_RS19225	0.46	+0.2
4,317,742	-		HGI48_RS19225	0.46	-1.8
4,317,742	-		HGI48_RS19225	0.46	+0.9
4,317,742	-		HGI48_RS19225	0.46	-0.3
4,317,742	-		HGI48_RS19225	0.46	-0.4
4,317,742	-		HGI48_RS19225	0.46	-1.7
4,317,742	-		HGI48_RS19225	0.46	-1.1
4,317,742	-		HGI48_RS19225	0.46	-0.1
4,317,746	+		HGI48_RS19225	0.46	-0.2
4,317,838	-		HGI48_RS19225	0.53	+0.6
4,317,906	+		HGI48_RS19225	0.58	-2.0
4,317,939	+		HGI48_RS19225	0.61	+0.4
4,317,939	+		HGI48_RS19225	0.61	-0.3
4,317,939	+		HGI48_RS19225	0.61	-1.4
4,317,939	+		HGI48_RS19225	0.61	-1.9
4,317,939	+		HGI48_RS19225	0.61	-1.7
4,317,939	+		HGI48_RS19225	0.61	-0.2
4,317,939	+		HGI48_RS19225	0.61	+0.3
4,317,940	-		HGI48_RS19225	0.61	+0.4
4,317,940	-		HGI48_RS19225	0.61	-0.1
4,317,940	-		HGI48_RS19225	0.61	-0.3
4,317,966	+				+1.8
4,317,966	+		HGI48_RS19225	0.63	-2.2
4,317,966	+		HGI48_RS19225	0.63	-0.2
4,317,966	+		HGI48_RS19225	0.63	-0.7
4,317,967	-		HGI48_RS19225	0.63	-0.2
4,317,967	-				+1.0
4,317,967	-		HGI48_RS19225	0.63	-0.4
4,317,981	+		HGI48_RS19225	0.64	-1.2
4,317,982	-				+2.2
4,317,982	-		HGI48_RS19225	0.64	-2.7
4,317,982	-		HGI48_RS19225	0.64	-1.0
4,317,982	-		HGI48_RS19225	0.64	-0.4
4,318,159	+		HGI48_RS19225	0.78	-0.5
4,318,159	+		HGI48_RS19225	0.78	+0.3
4,318,159	+		HGI48_RS19225	0.78	-0.4
4,318,159	+		HGI48_RS19225	0.78	+0.6
4,318,159	+		HGI48_RS19225	0.78	-0.7
4,318,160	-		HGI48_RS19225	0.78	-0.1
4,318,160	-		HGI48_RS19225	0.78	-1.1
4,318,160	-		HGI48_RS19225	0.78	-1.1
4,318,160	-		HGI48_RS19225	0.78	+0.4
4,318,160	-		HGI48_RS19225	0.78	+0.6
4,318,160	-		HGI48_RS19225	0.78	-0.8
4,318,225	+				+2.2
4,318,225	+		HGI48_RS19225	0.83	+1.3
4,318,241	-		HGI48_RS19225	0.84	+0.4
4,318,261	-		HGI48_RS19225	0.86	+0.5
4,318,261	-		HGI48_RS19225	0.86	-0.2
4,318,261	-		HGI48_RS19225	0.86	-1.0
4,318,261	-		HGI48_RS19225	0.86	-0.2
4,318,262	+		HGI48_RS19225	0.86	-1.7
4,318,262	+		HGI48_RS19225	0.86	+0.6
4,318,262	+		HGI48_RS19225	0.86	-0.4
4,318,263	-		HGI48_RS19225	0.86	-1.6
4,318,263	-		HGI48_RS19225	0.86	+1.0
4,318,263	-		HGI48_RS19225	0.86	-2.2
4,318,263	-		HGI48_RS19225	0.86	-1.3
4,318,263	-		HGI48_RS19225	0.86	-1.0
4,318,263	-		HGI48_RS19225	0.86	+0.5
4,318,277	-				+1.3
4,318,277	-		HGI48_RS19225	0.87	-1.4
4,318,277	-		HGI48_RS19225	0.87	-2.6
4,318,278	+		HGI48_RS19225	0.87	-2.6
4,318,279	-				+0.6
4,318,279	-				-1.0
4,318,281	+		HGI48_RS19225	0.87	-1.5
4,318,281	+				+0.0
4,318,281	+		HGI48_RS19225	0.87	-1.2
4,318,415	+				+0.5
4,318,428	+				+1.0
4,318,443	-				+0.4
4,318,502	+				+0.1
4,318,502	+				+0.3
4,318,506	+				-0.8
4,318,506	+				+0.6
4,318,507	-				-0.6
4,318,564	-				-0.4
4,318,569	+				+0.6
4,318,569	+				+0.2
4,318,570	-				-1.6
4,318,700	+		HGI48_RS19230	0.15	-1.7
4,318,805	-		HGI48_RS19230	0.23	-0.2
4,318,860	+				+2.2
4,318,976	-				-1.0
4,318,979	-		HGI48_RS19230	0.35	-0.7
4,319,005	-		HGI48_RS19230	0.37	+0.2
4,319,188	+		HGI48_RS19230	0.50	-1.3
4,319,200	-		HGI48_RS19230	0.51	-2.0
4,319,260	-		HGI48_RS19230	0.56	-1.1
4,319,270	+		HGI48_RS19230	0.56	-2.0
4,319,393	+		HGI48_RS19230	0.65	-0.7
4,319,393	+		HGI48_RS19230	0.65	-1.4
4,319,676	-		HGI48_RS19230	0.86	-1.0
4,319,678	+		HGI48_RS19230	0.86	-1.4
4,319,973	+				-1.4
4,319,974	-				+0.9
4,319,974	-				-0.2
4,319,974	-				+1.6
4,319,982	+				-0.3
4,319,984	+				+0.6
4,320,045	+		HGI48_RS19235	0.17	-2.2
4,320,072	-				+2.6
4,320,083	+		HGI48_RS19235	0.26	+0.6
4,320,083	+				+0.6
4,320,083	+		HGI48_RS19235	0.26	+0.6
4,320,084	-		HGI48_RS19235	0.26	-2.6
4,320,093	+		HGI48_RS19235	0.28	-2.4
4,320,093	+		HGI48_RS19235	0.28	-0.1
4,320,094	-		HGI48_RS19235	0.28	+0.1
4,320,094	-		HGI48_RS19235	0.28	+0.2
4,320,113	+		HGI48_RS19235	0.33	-1.1
4,320,113	+		HGI48_RS19235	0.33	-1.6
4,320,113	+		HGI48_RS19235	0.33	-0.3
4,320,114	-		HGI48_RS19235	0.33	-0.7
4,320,175	-		HGI48_RS19235	0.47	-0.2
4,320,175	-		HGI48_RS19235	0.47	-2.4
4,320,175	-		HGI48_RS19235	0.47	-0.7
4,320,176	+		HGI48_RS19235	0.47	+0.3
4,320,176	+		HGI48_RS19235	0.47	+0.7
4,320,177	-		HGI48_RS19235	0.48	+0.2
4,320,177	-		HGI48_RS19235	0.48	-0.1
4,320,192	+				+0.6
4,320,192	+		HGI48_RS19235	0.51	-2.2
4,320,192	+		HGI48_RS19235	0.51	-0.0
4,320,192	+		HGI48_RS19235	0.51	-2.0
4,320,193	-		HGI48_RS19235	0.51	-0.4
4,320,196	+		HGI48_RS19235	0.52	-0.4
4,320,196	+				-0.4
4,320,229	-		HGI48_RS19235	0.60	+0.8
4,320,274	-		HGI48_RS19235	0.70	-1.4
4,320,279	-		HGI48_RS19235	0.72	-3.0
4,320,360	-				-1.6
4,320,408	-				+0.4
4,320,431	-				-0.6
4,320,442	-				+0.7
4,320,444	-				+1.2
4,320,444	-				-0.7
4,320,444	-				+0.7