Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,298,145	+				-0.4
4,298,146	-				+0.3
4,298,146	-				-1.0
4,298,146	-				-1.0
4,298,146	-				-1.3
4,298,146	-				+0.5
4,298,146	-				+1.6
4,298,184	+				-2.2
4,298,213	+				+0.3
4,298,214	-				-1.3
4,298,214	-				-0.4
4,298,225	-				+0.4
4,298,405	-		HGI48_RS19135	0.12	-1.7
4,298,418	+		HGI48_RS19135	0.14	-1.2
4,298,418	+		HGI48_RS19135	0.14	+0.6
4,298,418	+		HGI48_RS19135	0.14	-0.5
4,298,419	-		HGI48_RS19135	0.14	-0.3
4,298,530	+		HGI48_RS19135	0.27	-0.1
4,298,530	+		HGI48_RS19135	0.27	-0.8
4,298,530	+		HGI48_RS19135	0.27	+0.6
4,298,531	-		HGI48_RS19135	0.27	+0.6
4,298,531	-		HGI48_RS19135	0.27	-1.7
4,298,580	-				+2.4
4,298,580	-		HGI48_RS19135	0.33	-0.7
4,298,733	-		HGI48_RS19135	0.52	-1.3
4,298,868	+		HGI48_RS19135	0.68	-0.5
4,298,868	+		HGI48_RS19135	0.68	-0.7
4,298,868	+		HGI48_RS19135	0.68	-0.2
4,298,868	+		HGI48_RS19135	0.68	+0.2
4,298,868	+		HGI48_RS19135	0.68	+1.8
4,298,869	-		HGI48_RS19135	0.68	-0.1
4,298,869	-		HGI48_RS19135	0.68	+0.9
4,298,869	-		HGI48_RS19135	0.68	-0.4
4,298,869	-				+1.8
4,298,870	+		HGI48_RS19135	0.68	+0.2
4,298,870	+				+1.3
4,298,871	-		HGI48_RS19135	0.68	+0.1
4,298,871	-		HGI48_RS19135	0.68	-0.4
4,299,107	+				+1.7
4,299,107	+				-1.5
4,299,108	-				+0.2
4,299,108	-				-1.0
4,299,111	+				-0.2
4,299,111	+				+0.6
4,299,111	+				-0.1
4,299,112	-				-1.0
4,299,112	-				-1.7
4,299,112	-				+0.0
4,299,112	-				-1.0
4,299,112	-				-2.0
4,299,184	+				-0.1
4,299,184	+				+0.6
4,299,189	+				+0.2
4,299,189	+				+1.3
4,299,189	+				-1.0
4,299,189	+				-0.1
4,299,190	-				+1.0
4,299,190	-				+0.1
4,299,190	-				-2.2
4,299,221	-				-0.8
4,299,235	+				-0.4
4,299,235	+				+0.2
4,299,235	+				-1.0
4,299,236	-				-0.5
4,299,236	-				+0.4
4,299,236	-				-0.1
4,299,271	+				-0.8
4,299,386	-		HGI48_RS19140	0.14	-2.3
4,299,447	+		HGI48_RS19140	0.17	-0.4
4,299,460	+		HGI48_RS19140	0.18	+0.7
4,299,460	+		HGI48_RS19140	0.18	-1.1
4,299,460	+				-0.4
4,299,475	+		HGI48_RS19140	0.19	-2.8
4,299,475	+		HGI48_RS19140	0.19	+1.3
4,299,475	+		HGI48_RS19140	0.19	+0.2
4,299,475	+				+0.6
4,299,476	-		HGI48_RS19140	0.19	+1.0
4,299,481	+		HGI48_RS19140	0.19	-0.2
4,299,482	-		HGI48_RS19140	0.19	+0.4
4,299,530	+		HGI48_RS19140	0.22	+1.3
4,299,530	+				+1.8
4,299,531	-		HGI48_RS19140	0.22	-0.9
4,299,545	+		HGI48_RS19140	0.23	-0.6
4,299,545	+		HGI48_RS19140	0.23	-1.0
4,299,628	+		HGI48_RS19140	0.27	+0.3
4,299,661	+		HGI48_RS19140	0.29	-0.1
4,299,661	+		HGI48_RS19140	0.29	-0.4
4,299,661	+		HGI48_RS19140	0.29	+1.3
4,299,661	+		HGI48_RS19140	0.29	-0.8
4,299,661	+		HGI48_RS19140	0.29	-0.7
4,299,661	+		HGI48_RS19140	0.29	+0.2
4,299,661	+		HGI48_RS19140	0.29	+0.6
4,299,661	+		HGI48_RS19140	0.29	-1.1
4,299,661	+		HGI48_RS19140	0.29	-0.4
4,299,661	+		HGI48_RS19140	0.29	+0.2
4,299,661	+		HGI48_RS19140	0.29	-0.4
4,299,661	+		HGI48_RS19140	0.29	-1.1
4,299,662	-		HGI48_RS19140	0.29	-0.0
4,299,662	-		HGI48_RS19140	0.29	-0.2
4,299,662	-		HGI48_RS19140	0.29	-0.1
4,299,662	-		HGI48_RS19140	0.29	-2.6
4,299,662	-		HGI48_RS19140	0.29	+0.8
4,299,662	-		HGI48_RS19140	0.29	-0.5
4,299,662	-		HGI48_RS19140	0.29	+1.7
4,299,662	-		HGI48_RS19140	0.29	-0.2
4,299,662	-		HGI48_RS19140	0.29	-0.3
4,299,723	+		HGI48_RS19140	0.33	-0.6
4,299,723	+		HGI48_RS19140	0.33	-2.4
4,299,724	-				+0.0
4,299,735	+		HGI48_RS19140	0.33	+0.6
4,299,778	+				+0.6
4,299,779	-				+2.2
4,299,832	+		HGI48_RS19140	0.39	+0.2
4,299,963	-		HGI48_RS19140	0.46	+0.1
4,299,965	+		HGI48_RS19140	0.46	-0.9
4,299,965	+		HGI48_RS19140	0.46	-1.0
4,299,965	+		HGI48_RS19140	0.46	-0.6
4,299,966	-		HGI48_RS19140	0.46	+0.1
4,300,000	+		HGI48_RS19140	0.48	+0.2
4,300,000	+		HGI48_RS19140	0.48	-0.6
4,300,000	+		HGI48_RS19140	0.48	-0.0
4,300,000	+		HGI48_RS19140	0.48	+0.6
4,300,000	+		HGI48_RS19140	0.48	-0.4
4,300,001	-		HGI48_RS19140	0.48	-2.2
4,300,009	+		HGI48_RS19140	0.49	-1.0
4,300,012	+		HGI48_RS19140	0.49	+0.0
4,300,051	+		HGI48_RS19140	0.51	-2.4
4,300,052	-		HGI48_RS19140	0.51	-1.3
4,300,052	-		HGI48_RS19140	0.51	+0.1
4,300,052	-		HGI48_RS19140	0.51	+0.9
4,300,123	+		HGI48_RS19140	0.55	+0.8
4,300,124	-		HGI48_RS19140	0.55	-2.4
4,300,135	+		HGI48_RS19140	0.56	-0.5
4,300,135	+		HGI48_RS19140	0.56	+0.1
4,300,136	-		HGI48_RS19140	0.56	-1.0
4,300,191	-		HGI48_RS19140	0.59	+0.5
4,300,290	-		HGI48_RS19140	0.65	+0.6
4,300,290	-		HGI48_RS19140	0.65	-1.3
4,300,298	-		HGI48_RS19140	0.65	+0.0
4,300,379	-		HGI48_RS19140	0.70	+0.3
4,300,379	-		HGI48_RS19140	0.70	-0.2
4,300,489	+		HGI48_RS19140	0.76	-1.7
4,300,489	+		HGI48_RS19140	0.76	-2.0
4,300,489	+		HGI48_RS19140	0.76	-1.0
4,300,489	+		HGI48_RS19140	0.76	-2.4
4,300,489	+		HGI48_RS19140	0.76	-0.1
4,300,489	+		HGI48_RS19140	0.76	+0.3
4,300,489	+		HGI48_RS19140	0.76	-0.4
4,300,489	+		HGI48_RS19140	0.76	-1.2
4,300,490	-		HGI48_RS19140	0.76	+0.3
4,300,490	-		HGI48_RS19140	0.76	+0.4
4,300,490	-		HGI48_RS19140	0.76	+0.3
4,300,493	+		HGI48_RS19140	0.76	-1.4
4,300,493	+		HGI48_RS19140	0.76	-0.7
4,300,493	+				+0.0
4,300,493	+		HGI48_RS19140	0.76	-0.8
4,300,598	-		HGI48_RS19140	0.82	-0.1
4,300,598	-		HGI48_RS19140	0.82	+0.0
4,300,598	-		HGI48_RS19140	0.82	+0.8
4,300,659	-		HGI48_RS19140	0.85	-2.2
4,300,660	+				+0.6
4,300,660	+		HGI48_RS19140	0.86	-1.8
4,300,660	+		HGI48_RS19140	0.86	-0.1
4,300,660	+		HGI48_RS19140	0.86	-0.7
4,300,661	-		HGI48_RS19140	0.86	+1.6
4,300,661	-		HGI48_RS19140	0.86	+0.0
4,300,661	-		HGI48_RS19140	0.86	+1.1
4,300,661	-		HGI48_RS19140	0.86	-0.5
4,300,697	-		HGI48_RS19140	0.88	-0.3
4,300,756	+				-0.7
4,300,756	+				-1.6
4,300,756	+				-0.1
4,300,756	+				-0.6
4,300,757	-				+0.8
4,300,757	-				+1.0
4,300,757	-				-0.3
4,300,757	-				+0.0
4,300,757	-				+0.1
4,300,766	+				-0.4
4,300,856	-				-2.0
4,300,856	-				+0.6
4,300,856	-				+0.6
4,301,078	-				+0.8
4,301,078	-				-0.5
4,301,117	-				+0.6
4,301,126	+		HGI48_RS19145	0.10	-0.3
4,301,127	-		HGI48_RS19145	0.10	-0.2
4,301,165	-		HGI48_RS19145	0.13	+0.3
4,301,165	-		HGI48_RS19145	0.13	-1.0
4,301,165	-		HGI48_RS19145	0.13	-1.0
4,301,165	-		HGI48_RS19145	0.13	-0.3
4,301,165	-		HGI48_RS19145	0.13	-0.3
4,301,191	+		HGI48_RS19145	0.15	+0.2
4,301,191	+		HGI48_RS19145	0.15	+0.7
4,301,192	-		HGI48_RS19145	0.15	-1.2
4,301,257	+		HGI48_RS19145	0.20	-0.5
4,301,257	+		HGI48_RS19145	0.20	+0.7
4,301,258	-		HGI48_RS19145	0.20	-0.7
4,301,258	-		HGI48_RS19145	0.20	-0.9
4,301,258	-		HGI48_RS19145	0.20	-0.4
4,301,264	-				+0.6
4,301,264	-		HGI48_RS19145	0.21	-0.4
4,301,264	-		HGI48_RS19145	0.21	-0.1
4,301,350	+		HGI48_RS19145	0.27	-3.0
4,301,350	+		HGI48_RS19145	0.27	-1.4
4,301,350	+		HGI48_RS19145	0.27	-0.1
4,301,351	-		HGI48_RS19145	0.27	-2.6
4,301,504	+		HGI48_RS19145	0.39	-0.4
4,301,509	+		HGI48_RS19145	0.40	-1.4
4,301,510	-		HGI48_RS19145	0.40	+1.6
4,301,510	-		HGI48_RS19145	0.40	-0.2
4,301,510	-		HGI48_RS19145	0.40	+0.3
4,301,554	+		HGI48_RS19145	0.43	-0.2
4,301,554	+		HGI48_RS19145	0.43	+1.5
4,301,631	+		HGI48_RS19145	0.49	+1.1
4,301,632	-		HGI48_RS19145	0.49	+0.3