Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18960

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,257,124	+		HGI48_RS18955	0.55	-1.0
4,257,124	+		HGI48_RS18955	0.55	-0.1
4,257,125	-		HGI48_RS18955	0.55	-0.4
4,257,175	+		HGI48_RS18955	0.57	-2.4
4,257,397	+		HGI48_RS18955	0.68	+0.6
4,257,397	+		HGI48_RS18955	0.68	+0.6
4,257,398	-		HGI48_RS18955	0.68	-0.1
4,257,398	-		HGI48_RS18955	0.68	+0.0
4,257,398	-		HGI48_RS18955	0.68	+0.2
4,257,467	+		HGI48_RS18955	0.71	+2.0
4,257,468	-		HGI48_RS18955	0.71	+0.4
4,257,566	+		HGI48_RS18955	0.76	+0.2
4,257,566	+		HGI48_RS18955	0.76	-0.6
4,257,566	+		HGI48_RS18955	0.76	-0.4
4,257,567	-		HGI48_RS18955	0.76	-1.0
4,257,568	+		HGI48_RS18955	0.76	-0.1
4,257,627	+		HGI48_RS18955	0.79	+0.8
4,257,627	+		HGI48_RS18955	0.79	-0.3
4,257,627	+		HGI48_RS18955	0.79	-0.1
4,257,628	-		HGI48_RS18955	0.79	+0.2
4,257,628	-		HGI48_RS18955	0.79	+0.4
4,257,628	-		HGI48_RS18955	0.79	-0.2
4,257,628	-		HGI48_RS18955	0.79	+0.3
4,257,649	+				+1.6
4,257,649	+				+0.0
4,257,721	+		HGI48_RS18955	0.83	-3.0
4,257,721	+				+0.0
4,257,721	+		HGI48_RS18955	0.83	+0.6
4,257,722	-		HGI48_RS18955	0.83	-0.7
4,257,722	-				+1.6
4,257,722	-		HGI48_RS18955	0.83	+0.0
4,257,722	-		HGI48_RS18955	0.83	-0.4
4,257,778	+		HGI48_RS18955	0.86	+1.2
4,257,779	-		HGI48_RS18955	0.86	+0.3
4,257,967	+				-1.0
4,257,968	-				+0.6
4,258,059	-				-0.8
4,258,091	+				-0.7
4,258,091	+				+0.0
4,258,137	+				+0.1
4,258,137	+				+0.8
4,258,138	-				-0.9
4,258,327	+				-1.0
4,258,327	+		HGI48_RS18960	0.18	+0.2
4,258,327	+				+0.6
4,258,330	+		HGI48_RS18960	0.18	+0.2
4,258,330	+		HGI48_RS18960	0.18	-2.3
4,258,330	+		HGI48_RS18960	0.18	-1.0
4,258,331	-		HGI48_RS18960	0.18	+0.9
4,258,331	-		HGI48_RS18960	0.18	+1.0
4,258,331	-		HGI48_RS18960	0.18	+0.2
4,258,627	-		HGI48_RS18960	0.41	+1.4
4,258,679	+		HGI48_RS18960	0.45	-0.3
4,258,679	+		HGI48_RS18960	0.45	+0.3
4,258,687	+				-1.0
4,258,688	-		HGI48_RS18960	0.45	-0.6
4,258,748	+		HGI48_RS18960	0.50	-0.4
4,258,748	+		HGI48_RS18960	0.50	+0.7
4,258,748	+		HGI48_RS18960	0.50	-1.3
4,258,748	+		HGI48_RS18960	0.50	+0.6
4,258,748	+		HGI48_RS18960	0.50	-0.2
4,258,749	-		HGI48_RS18960	0.50	-0.1
4,258,749	-		HGI48_RS18960	0.50	+0.4
4,258,749	-		HGI48_RS18960	0.50	-1.7
4,258,749	-		HGI48_RS18960	0.50	+1.0
4,258,840	+		HGI48_RS18960	0.57	-2.0
4,259,038	+		HGI48_RS18960	0.72	+0.5
4,259,038	+		HGI48_RS18960	0.72	+1.4
4,259,039	-		HGI48_RS18960	0.72	-0.4
4,259,307	+				+0.2
4,259,308	-				-0.2
4,259,374	+				+0.4
4,259,374	+				-2.0
4,259,375	-				-2.0
4,259,375	-				+0.2
4,259,375	-				+0.6
4,259,375	-				+0.6
4,259,375	-				-1.0
4,259,568	+		HGI48_RS18965	0.20	+0.0
4,259,690	+		HGI48_RS18965	0.36	+0.2
4,259,690	+		HGI48_RS18965	0.36	-0.7
4,259,690	+		HGI48_RS18965	0.36	+0.2
4,259,691	-		HGI48_RS18965	0.36	-0.8
4,259,740	-		HGI48_RS18965	0.42	-1.3
4,259,740	-		HGI48_RS18965	0.42	+1.3
4,259,922	-				-1.0
4,259,922	-		HGI48_RS18965	0.64	-2.0
4,259,922	-		HGI48_RS18965	0.64	-2.2
4,259,922	-		HGI48_RS18965	0.64	-2.2
4,259,925	+		HGI48_RS18965	0.65	-1.0
4,259,926	-		HGI48_RS18965	0.65	-0.1
4,259,926	-		HGI48_RS18965	0.65	-1.9
4,260,102	+		HGI48_RS18965	0.87	-1.0
4,260,103	-		HGI48_RS18965	0.87	-1.0
4,260,140	+				-0.2
4,260,140	+				-0.4
4,260,141	-				+0.9
4,260,290	+				-0.4
4,260,295	-				+1.8
4,260,295	-				+0.3
4,260,306	+				-0.7
4,260,307	-				-0.8
4,260,307	-				-0.2
4,260,307	-				+0.6
4,260,307	-				-2.2
4,260,338	+				-1.1
4,260,338	+				-1.2
4,260,338	+				-0.5
4,260,338	+				+1.1
4,260,339	-				+0.6
4,260,339	-				-1.0
4,260,339	-				-1.4
4,260,339	-				+1.3