Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17855

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,009,636	-				-1.8
4,009,803	+				+0.5
4,009,804	-				+0.7
4,009,828	+				+0.1
4,009,828	+				-0.8
4,009,829	-				-1.1
4,009,829	-				+0.5
4,010,012	-		HGI48_RS17855	0.33	+0.3
4,010,012	-		HGI48_RS17855	0.33	-0.7
4,010,030	-		HGI48_RS17855	0.36	-0.1
4,010,030	-		HGI48_RS17855	0.36	+1.0
4,010,035	-		HGI48_RS17855	0.36	+0.5
4,010,171	-		HGI48_RS17855	0.54	+1.1
4,010,180	+		HGI48_RS17855	0.55	+1.2
4,010,181	-		HGI48_RS17855	0.56	-1.1
4,010,181	-		HGI48_RS17855	0.56	-1.2
4,010,181	-		HGI48_RS17855	0.56	+1.0
4,010,181	-		HGI48_RS17855	0.56	+0.9
4,010,181	-		HGI48_RS17855	0.56	-0.5
4,010,183	+		HGI48_RS17855	0.56	+0.7
4,010,184	-		HGI48_RS17855	0.56	-1.5
4,010,248	-		HGI48_RS17855	0.64	-0.2
4,010,616	+				+1.5
4,010,617	-				-0.3
4,010,669	-				-1.4
4,010,702	-				-0.7
4,010,702	-				-1.5
4,010,747	-				-2.3
4,010,801	+		HGI48_RS17860	0.26	-2.7
4,010,810	-		HGI48_RS17860	0.30	+1.1
4,010,864	+		HGI48_RS17860	0.55	+0.9
4,010,865	-		HGI48_RS17860	0.56	+0.3
4,010,882	+		HGI48_RS17860	0.63	+0.8
4,010,882	+		HGI48_RS17860	0.63	-0.5
4,010,882	+		HGI48_RS17860	0.63	-1.8
4,010,882	+				+0.9
4,010,883	-		HGI48_RS17860	0.64	+0.2
4,010,883	-		HGI48_RS17860	0.64	-1.3
4,010,883	-		HGI48_RS17860	0.64	-1.1
4,010,883	-		HGI48_RS17860	0.64	+0.5
4,010,883	-		HGI48_RS17860	0.64	-0.1
4,010,883	-		HGI48_RS17860	0.64	+0.6
4,010,883	-		HGI48_RS17860	0.64	-0.5
4,010,883	-		HGI48_RS17860	0.64	-0.1
4,010,883	-		HGI48_RS17860	0.64	-0.6
4,010,883	-		HGI48_RS17860	0.64	-0.1
4,010,883	-		HGI48_RS17860	0.64	+0.5
4,010,886	+		HGI48_RS17860	0.65	+1.0
4,010,887	-		HGI48_RS17860	0.66	-1.8
4,010,887	-		HGI48_RS17860	0.66	-0.0
4,010,921	+		HGI48_RS17860	0.81	+0.3
4,010,922	-		HGI48_RS17860	0.82	+0.7
4,010,942	+				+0.3
4,010,942	+				-0.8
4,010,974	+				-0.2
4,010,974	+				+0.9
4,010,975	-				+0.5
4,010,976	+				+0.4
4,010,989	-				+0.5
4,010,989	-				+0.1
4,011,072	+				-0.6
4,011,073	-				+0.8
4,011,090	+				+0.5
4,011,094	+				-0.1
4,011,168	+				+0.3
4,011,169	-				-1.5
4,011,189	+				+0.5
4,011,221	+				-0.6
4,011,221	+				+0.2
4,011,222	-				-0.1
4,011,222	-				+0.2
4,011,222	-				+2.7
4,011,414	+				-0.1
4,011,414	+		HGI48_RS17865	0.18	+0.3
4,011,414	+		HGI48_RS17865	0.18	+0.2
4,011,415	-		HGI48_RS17865	0.18	-0.8
4,011,415	-		HGI48_RS17865	0.18	-1.6
4,011,415	-		HGI48_RS17865	0.18	+0.1
4,011,418	+		HGI48_RS17865	0.18	+0.0
4,011,418	+				+2.1
4,011,418	+				+0.9
4,011,419	-				+0.5
4,011,419	-				+0.9
4,011,457	+		HGI48_RS17865	0.21	-1.1
4,011,457	+		HGI48_RS17865	0.21	-0.9
4,011,458	-		HGI48_RS17865	0.21	+0.0
4,011,469	+		HGI48_RS17865	0.22	+0.7
4,011,469	+				-0.1
4,011,469	+		HGI48_RS17865	0.22	+0.1
4,011,469	+		HGI48_RS17865	0.22	+1.4
4,011,469	+		HGI48_RS17865	0.22	-0.5
4,011,469	+		HGI48_RS17865	0.22	-2.4
4,011,469	+		HGI48_RS17865	0.22	-0.5
4,011,470	-		HGI48_RS17865	0.22	-0.2
4,011,470	-		HGI48_RS17865	0.22	-0.1
4,011,470	-		HGI48_RS17865	0.22	+0.7
4,011,470	-		HGI48_RS17865	0.22	+0.1
4,011,470	-		HGI48_RS17865	0.22	-1.1
4,011,470	-		HGI48_RS17865	0.22	-0.8
4,011,511	+		HGI48_RS17865	0.25	+0.1
4,011,511	+				+2.1
4,011,511	+		HGI48_RS17865	0.25	-2.3
4,011,511	+		HGI48_RS17865	0.25	+0.8
4,011,511	+		HGI48_RS17865	0.25	+1.0
4,011,512	-		HGI48_RS17865	0.25	-0.5
4,011,512	-		HGI48_RS17865	0.25	-0.7
4,011,512	-		HGI48_RS17865	0.25	-2.2
4,011,512	-		HGI48_RS17865	0.25	-0.0