Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17660

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,951,639	+		HGI48_RS17645	0.53	+0.1
3,951,639	+		HGI48_RS17645	0.53	+1.3
3,951,639	+		HGI48_RS17645	0.53	-1.5
3,951,640	-		HGI48_RS17645	0.54	+0.8
3,951,640	-		HGI48_RS17645	0.54	-1.7
3,951,640	-		HGI48_RS17645	0.54	-1.8
3,951,646	+		HGI48_RS17645	0.55	+0.2
3,951,646	+		HGI48_RS17645	0.55	+0.5
3,951,646	+		HGI48_RS17645	0.55	+0.8
3,951,647	-		HGI48_RS17645	0.55	+0.0
3,951,647	-		HGI48_RS17645	0.55	+0.3
3,951,856	+				-0.7
3,951,857	-				+0.4
3,951,871	+				+0.8
3,951,872	-				-1.8
3,951,902	+				-0.3
3,951,902	+				-0.0
3,951,903	-				-0.1
3,951,980	+		HGI48_RS17650	0.11	+0.5
3,952,094	+		HGI48_RS17650	0.35	-2.3
3,952,095	-		HGI48_RS17650	0.36	-0.1
3,952,095	-				+2.1
3,952,098	-		HGI48_RS17650	0.36	-0.3
3,952,098	-		HGI48_RS17650	0.36	-0.4
3,952,283	+		HGI48_RS17650	0.76	-0.1
3,952,283	+		HGI48_RS17650	0.76	+0.2
3,952,284	-		HGI48_RS17650	0.76	+1.1
3,952,292	+		HGI48_RS17650	0.78	+0.9
3,952,421	+				-0.3
3,952,421	+				+0.3
3,952,421	+				+0.5
3,952,421	+				-0.0
3,952,421	+				-0.7
3,952,421	+				-1.4
3,952,421	+				-1.8
3,952,422	-				-0.2
3,952,422	-				-1.5
3,952,422	-				+0.3
3,952,422	-				+1.2
3,952,422	-				-0.1
3,952,428	-				+0.5
3,952,705	+		HGI48_RS17660	0.14	+0.7
3,952,705	+		HGI48_RS17660	0.14	-0.2
3,952,705	+		HGI48_RS17660	0.14	+0.1
3,952,705	+		HGI48_RS17660	0.14	+0.1
3,952,705	+		HGI48_RS17660	0.14	-0.6
3,952,706	-		HGI48_RS17660	0.15	-0.8
3,952,774	+		HGI48_RS17660	0.25	+0.4
3,952,774	+				+0.5
3,952,774	+		HGI48_RS17660	0.25	-0.2
3,952,775	-		HGI48_RS17660	0.25	+0.7
3,952,775	-		HGI48_RS17660	0.25	+0.5
3,952,775	-				+0.5
3,952,775	-		HGI48_RS17660	0.25	-1.0
3,952,775	-		HGI48_RS17660	0.25	+0.1
3,952,886	-		HGI48_RS17660	0.42	-1.1
3,952,891	+		HGI48_RS17660	0.43	-0.5
3,953,044	+		HGI48_RS17660	0.67	-0.1
3,953,044	+		HGI48_RS17660	0.67	-1.5
3,953,044	+		HGI48_RS17660	0.67	-1.1
3,953,044	+		HGI48_RS17660	0.67	-0.9
3,953,044	+		HGI48_RS17660	0.67	-0.1
3,953,045	-		HGI48_RS17660	0.67	-1.3
3,953,045	-		HGI48_RS17660	0.67	+0.0
3,953,045	-		HGI48_RS17660	0.67	+0.0
3,953,045	-		HGI48_RS17660	0.67	-0.7
3,953,045	-		HGI48_RS17660	0.67	-1.7
3,953,045	-		HGI48_RS17660	0.67	-0.6
3,953,045	-				-0.1
3,953,114	+		HGI48_RS17660	0.77	-2.5
3,953,114	+		HGI48_RS17660	0.77	-0.8
3,953,155	+		HGI48_RS17660	0.84	-1.1
3,953,156	-		HGI48_RS17660	0.84	+0.1
3,953,170	+		HGI48_RS17660	0.86	+0.2
3,953,170	+		HGI48_RS17660	0.86	-0.5
3,953,171	-		HGI48_RS17660	0.86	+0.5
3,953,173	+		HGI48_RS17660	0.87	-0.5
3,953,174	-				+1.2
3,953,174	-		HGI48_RS17660	0.87	-1.8
3,953,174	-				-0.5
3,953,174	-		HGI48_RS17660	0.87	-0.1
3,953,217	+				-2.4
3,953,217	+				+0.7
3,953,217	+				+0.5
3,953,217	+				-1.1
3,953,217	+				-2.5
3,953,218	-				-0.3
3,953,218	-				+0.3
3,953,218	-				-1.5
3,953,239	+				+0.5
3,953,239	+				+0.9
3,953,240	-				+0.1
3,953,240	-				-1.1
3,953,240	-				-0.4
3,953,240	-				+0.9
3,953,265	+				-0.1
3,953,364	-				-1.3
3,953,525	+		HGI48_RS17665	0.14	-1.5
3,953,525	+		HGI48_RS17665	0.14	-0.0
3,953,525	+		HGI48_RS17665	0.14	-0.2
3,953,525	+		HGI48_RS17665	0.14	+0.9
3,953,525	+		HGI48_RS17665	0.14	-0.3
3,953,526	-		HGI48_RS17665	0.14	-0.4
3,953,526	-		HGI48_RS17665	0.14	+0.9
3,953,526	-		HGI48_RS17665	0.14	-1.1
3,953,647	+		HGI48_RS17665	0.21	+0.4
3,953,647	+		HGI48_RS17665	0.21	+1.2
3,953,647	+		HGI48_RS17665	0.21	-0.5
3,953,648	-		HGI48_RS17665	0.21	-0.2
3,953,648	-		HGI48_RS17665	0.21	+0.2
3,953,675	+		HGI48_RS17665	0.23	-0.2
3,953,675	+				-1.1
3,953,675	+		HGI48_RS17665	0.23	-0.1
3,953,758	-		HGI48_RS17665	0.27	-1.5
3,953,758	-		HGI48_RS17665	0.27	+1.7
3,953,813	+		HGI48_RS17665	0.30	+0.7
3,953,937	+		HGI48_RS17665	0.37	+0.8
3,953,937	+		HGI48_RS17665	0.37	+0.5
3,953,938	-				-0.5
3,954,240	+				+2.7
3,954,253	+		HGI48_RS17665	0.55	-1.2
3,954,254	-		HGI48_RS17665	0.55	-1.1
3,954,254	-		HGI48_RS17665	0.55	-0.5
3,954,254	-		HGI48_RS17665	0.55	+0.2