Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17515

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,920,016	-				+0.5
3,920,018	+				+1.5
3,920,018	+				-1.3
3,920,019	-				-0.2
3,920,019	-				+2.1
3,920,087	+				-0.1
3,920,105	+				+1.2
3,920,105	+				-1.1
3,920,106	-				+0.9
3,920,263	-		HGI48_RS17510	0.21	-1.2
3,920,282	+		HGI48_RS17510	0.23	-1.5
3,920,283	-		HGI48_RS17510	0.23	+0.6
3,920,471	+		HGI48_RS17510	0.46	+0.4
3,920,472	-		HGI48_RS17510	0.46	+1.3
3,920,472	-		HGI48_RS17510	0.46	+1.0
3,920,472	-		HGI48_RS17510	0.46	-2.1
3,920,477	+		HGI48_RS17510	0.46	+0.0
3,920,477	+		HGI48_RS17510	0.46	+0.6
3,920,478	-		HGI48_RS17510	0.47	+0.3
3,920,478	-		HGI48_RS17510	0.47	-0.2
3,920,478	-		HGI48_RS17510	0.47	+1.1
3,920,478	-		HGI48_RS17510	0.47	-0.0
3,920,478	-		HGI48_RS17510	0.47	+0.5
3,920,511	+		HGI48_RS17510	0.50	+1.3
3,920,553	+		HGI48_RS17510	0.55	+0.3
3,920,553	+		HGI48_RS17510	0.55	-1.0
3,920,554	-		HGI48_RS17510	0.56	-1.5
3,920,734	-		HGI48_RS17510	0.77	+0.8
3,920,762	+		HGI48_RS17510	0.80	-1.5
3,920,762	+		HGI48_RS17510	0.80	-2.5
3,920,763	-		HGI48_RS17510	0.80	-2.5
3,920,763	-		HGI48_RS17510	0.80	+0.5
3,920,790	-				-1.1
3,920,826	-		HGI48_RS17510	0.88	+1.0
3,920,952	+				-0.5
3,920,953	-				-0.2
3,920,953	-				+2.3
3,921,072	+		HGI48_RS17515	0.18	-0.1
3,921,072	+				-1.1
3,921,072	+		HGI48_RS17515	0.18	-0.5
3,921,072	+		HGI48_RS17515	0.18	-0.8
3,921,073	-		HGI48_RS17515	0.18	-2.2
3,921,073	-		HGI48_RS17515	0.18	+0.5
3,921,073	-		HGI48_RS17515	0.18	-0.4
3,921,076	+		HGI48_RS17515	0.18	-0.4
3,921,076	+		HGI48_RS17515	0.18	-1.7
3,921,076	+		HGI48_RS17515	0.18	-0.2
3,921,076	+		HGI48_RS17515	0.18	+0.2
3,921,076	+		HGI48_RS17515	0.18	-1.5
3,921,076	+		HGI48_RS17515	0.18	+1.0
3,921,076	+		HGI48_RS17515	0.18	-1.8
3,921,076	+		HGI48_RS17515	0.18	-0.0
3,921,077	-		HGI48_RS17515	0.18	-1.7
3,921,077	-		HGI48_RS17515	0.18	-0.8
3,921,413	+		HGI48_RS17515	0.59	-2.5
3,921,414	-		HGI48_RS17515	0.59	-1.5
3,921,414	-		HGI48_RS17515	0.59	-0.4
3,921,414	-		HGI48_RS17515	0.59	+0.2
3,921,414	-		HGI48_RS17515	0.59	+1.3
3,921,451	+		HGI48_RS17515	0.64	-2.8
3,921,451	+		HGI48_RS17515	0.64	+0.7
3,921,452	-		HGI48_RS17515	0.64	-1.3
3,921,452	-		HGI48_RS17515	0.64	-0.4
3,921,452	-		HGI48_RS17515	0.64	+0.3
3,921,452	-		HGI48_RS17515	0.64	-0.5
3,921,452	-		HGI48_RS17515	0.64	-0.3
3,921,472	+		HGI48_RS17515	0.66	-0.4
3,921,604	+		HGI48_RS17515	0.82	+0.2
3,921,604	+		HGI48_RS17515	0.82	-1.7
3,921,604	+		HGI48_RS17515	0.82	+0.2
3,921,604	+		HGI48_RS17515	0.82	-0.2
3,921,604	+		HGI48_RS17515	0.82	+0.1
3,921,604	+				-0.1
3,921,605	-		HGI48_RS17515	0.82	-0.5
3,921,605	-		HGI48_RS17515	0.82	-0.3
3,921,605	-		HGI48_RS17515	0.82	+0.3
3,921,605	-		HGI48_RS17515	0.82	-0.3
3,921,605	-		HGI48_RS17515	0.82	-0.3
3,921,605	-		HGI48_RS17515	0.82	-1.1
3,921,646	+		HGI48_RS17515	0.87	+0.2
3,921,730	-				-1.1
3,921,730	-				+0.0
3,921,770	-				-0.6
3,921,770	-				-0.1
3,921,772	+				-0.5
3,921,772	+				+0.3
3,921,773	-				-0.5
3,921,773	-				-0.6
3,921,874	+				-0.1
3,921,874	+				+1.4
3,921,874	+				+0.8
3,921,875	-				+2.1
3,921,875	-				+0.1
3,921,991	+		HGI48_RS17520	0.21	-2.3
3,921,992	-		HGI48_RS17520	0.21	-0.5
3,921,992	-		HGI48_RS17520	0.21	-2.8
3,921,992	-		HGI48_RS17520	0.21	+0.7
3,921,992	-		HGI48_RS17520	0.21	-2.0
3,921,992	-		HGI48_RS17520	0.21	+0.2
3,921,992	-		HGI48_RS17520	0.21	+0.8
3,921,992	-		HGI48_RS17520	0.21	+0.1
3,922,030	+		HGI48_RS17520	0.25	+1.3
3,922,031	-		HGI48_RS17520	0.25	-0.8
3,922,031	-		HGI48_RS17520	0.25	+0.8
3,922,031	-		HGI48_RS17520	0.25	-0.5
3,922,038	-		HGI48_RS17520	0.25	+0.3
3,922,051	+		HGI48_RS17520	0.27	+0.5
3,922,086	+		HGI48_RS17520	0.30	+0.7
3,922,086	+		HGI48_RS17520	0.30	-2.1
3,922,087	-		HGI48_RS17520	0.30	-0.1
3,922,087	-		HGI48_RS17520	0.30	-2.1
3,922,087	-		HGI48_RS17520	0.30	-0.2
3,922,087	-		HGI48_RS17520	0.30	-1.7
3,922,345	+		HGI48_RS17520	0.55	+0.1
3,922,345	+		HGI48_RS17520	0.55	-0.5
3,922,345	+		HGI48_RS17520	0.55	-0.1
3,922,345	+		HGI48_RS17520	0.55	+0.9
3,922,345	+		HGI48_RS17520	0.55	-2.3
3,922,345	+		HGI48_RS17520	0.55	+0.5
3,922,345	+		HGI48_RS17520	0.55	-0.5
3,922,345	+		HGI48_RS17520	0.55	-1.7
3,922,346	-		HGI48_RS17520	0.55	-0.1
3,922,346	-		HGI48_RS17520	0.55	+0.8
3,922,373	+		HGI48_RS17520	0.57	+1.3
3,922,373	+		HGI48_RS17520	0.57	-1.5
3,922,382	+		HGI48_RS17520	0.58	-1.8
3,922,383	-		HGI48_RS17520	0.58	+0.8
3,922,389	+		HGI48_RS17520	0.59	+0.5
3,922,390	-		HGI48_RS17520	0.59	-0.8
3,922,429	+		HGI48_RS17520	0.62	-0.6
3,922,429	+				+1.5
3,922,498	+		HGI48_RS17520	0.69	+0.5
3,922,498	+		HGI48_RS17520	0.69	+0.2
3,922,645	+		HGI48_RS17520	0.83	-0.8
3,922,646	-		HGI48_RS17520	0.83	-0.0
3,922,646	-		HGI48_RS17520	0.83	+0.5
3,922,646	-				+1.9
3,922,646	-		HGI48_RS17520	0.83	-1.0
3,922,671	-		HGI48_RS17520	0.85	+1.9
3,922,682	+		HGI48_RS17520	0.87	+0.3
3,922,691	+		HGI48_RS17520	0.87	+0.2
3,922,709	+		HGI48_RS17520	0.89	-1.5
3,922,710	-		HGI48_RS17520	0.89	-0.3
3,922,710	-		HGI48_RS17520	0.89	-1.0
3,922,712	+				+2.1
3,922,712	+		HGI48_RS17520	0.89	+0.5
3,922,713	-		HGI48_RS17520	0.89	-0.0