Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,776,988	-				-1.8
3,777,034	+				-0.4
3,777,034	+				-0.5
3,777,034	+				+0.3
3,777,034	+				-0.5
3,777,035	-				+1.6
3,777,038	-				-1.4
3,777,038	-				-0.5
3,777,109	+				+0.5
3,777,109	+				-0.1
3,777,110	-				+0.1
3,777,110	-				+0.3
3,777,110	-				+0.7
3,777,112	+				+0.2
3,777,112	+				+0.1
3,777,113	-				-1.1
3,777,113	-				+0.2
3,777,206	-		HGI48_RS16865	0.35	+0.7
3,777,312	+				+3.2
3,777,312	+		HGI48_RS16865	0.68	+0.3
3,777,312	+		HGI48_RS16865	0.68	-0.0
3,777,312	+		HGI48_RS16865	0.68	-0.4
3,777,312	+		HGI48_RS16865	0.68	+0.5
3,777,332	+		HGI48_RS16865	0.74	-0.2
3,777,333	-		HGI48_RS16865	0.74	+0.8
3,777,387	+				+0.7
3,777,388	-				+1.1
3,777,394	+				+0.0
3,777,395	-				+0.7
3,777,395	-				-0.5
3,777,414	+				+1.0
3,777,437	-				-1.5
3,777,437	-				+0.7
3,777,489	+				+0.5
3,777,489	+				-0.5
3,777,489	+				+0.2
3,777,489	+				-0.1
3,777,489	+				+0.5
3,777,490	-				+0.3
3,777,490	-				+0.0
3,777,490	-				-0.6
3,777,490	-				+0.5
3,777,536	+				-1.1
3,777,536	+				-0.0
3,777,536	+				-0.3
3,777,536	+				-0.2
3,777,536	+				+0.3
3,777,537	-				+1.0
3,777,537	-				-0.5
3,777,537	-				+0.2
3,777,540	+				-1.3
3,777,540	+				-0.2
3,777,541	-				-1.1
3,777,541	-				-0.4
3,777,541	-				-0.3
3,777,541	-				+0.1
3,777,579	+		HGI48_RS16870	0.13	-1.5
3,777,579	+		HGI48_RS16870	0.13	-0.6
3,777,580	-		HGI48_RS16870	0.13	+0.1
3,777,580	-		HGI48_RS16870	0.13	+0.5
3,777,580	-		HGI48_RS16870	0.13	-1.4
3,777,638	-		HGI48_RS16870	0.17	-0.5
3,777,653	-		HGI48_RS16870	0.18	+0.7
3,777,654	+		HGI48_RS16870	0.19	-0.4
3,777,654	+				+1.7
3,777,655	-		HGI48_RS16870	0.19	-0.6
3,777,906	+		HGI48_RS16870	0.38	+0.5
3,777,906	+		HGI48_RS16870	0.38	-0.8
3,777,906	+		HGI48_RS16870	0.38	+0.6
3,777,906	+		HGI48_RS16870	0.38	-0.9
3,777,906	+		HGI48_RS16870	0.38	-0.1
3,777,907	-		HGI48_RS16870	0.38	-0.6
3,777,916	+		HGI48_RS16870	0.39	+0.9
3,777,916	+		HGI48_RS16870	0.39	-0.1
3,777,918	+		HGI48_RS16870	0.39	+1.2
3,777,918	+		HGI48_RS16870	0.39	-0.2
3,777,918	+		HGI48_RS16870	0.39	-0.2
3,777,918	+		HGI48_RS16870	0.39	-0.5
3,777,918	+		HGI48_RS16870	0.39	+0.7
3,777,918	+		HGI48_RS16870	0.39	+0.5
3,777,918	+		HGI48_RS16870	0.39	+1.3
3,777,918	+		HGI48_RS16870	0.39	-0.9
3,777,918	+		HGI48_RS16870	0.39	-2.4
3,777,918	+		HGI48_RS16870	0.39	-0.4
3,777,918	+		HGI48_RS16870	0.39	+0.8
3,777,918	+		HGI48_RS16870	0.39	-0.0
3,777,918	+		HGI48_RS16870	0.39	-0.2
3,777,918	+		HGI48_RS16870	0.39	+0.1
3,777,918	+		HGI48_RS16870	0.39	+0.1
3,777,918	+		HGI48_RS16870	0.39	-1.9
3,777,918	+		HGI48_RS16870	0.39	-1.0
3,777,919	-		HGI48_RS16870	0.39	-0.0
3,777,919	-		HGI48_RS16870	0.39	-2.4
3,777,919	-				-0.5
3,777,919	-		HGI48_RS16870	0.39	-0.5
3,777,919	-		HGI48_RS16870	0.39	+0.1
3,777,919	-		HGI48_RS16870	0.39	+0.5
3,777,919	-		HGI48_RS16870	0.39	-1.1
3,777,919	-		HGI48_RS16870	0.39	-0.7
3,777,919	-		HGI48_RS16870	0.39	-0.9
3,777,919	-		HGI48_RS16870	0.39	+0.5
3,777,919	-		HGI48_RS16870	0.39	+1.2
3,777,919	-		HGI48_RS16870	0.39	+0.1
3,777,919	-		HGI48_RS16870	0.39	+0.8
3,777,919	-		HGI48_RS16870	0.39	-0.5
3,777,919	-		HGI48_RS16870	0.39	+0.0
3,777,927	+		HGI48_RS16870	0.40	-1.5
3,777,927	+		HGI48_RS16870	0.40	-0.0
3,777,927	+		HGI48_RS16870	0.40	+0.2
3,777,927	+		HGI48_RS16870	0.40	-0.8
3,777,927	+		HGI48_RS16870	0.40	+0.1
3,777,927	+		HGI48_RS16870	0.40	-1.1
3,777,927	+		HGI48_RS16870	0.40	-0.7
3,777,927	+				+1.0
3,777,927	+		HGI48_RS16870	0.40	+0.2
3,777,927	+		HGI48_RS16870	0.40	-0.0
3,777,928	-		HGI48_RS16870	0.40	-1.1
3,777,928	-		HGI48_RS16870	0.40	+1.5
3,777,928	-				+0.5
3,777,928	-		HGI48_RS16870	0.40	-1.0
3,777,928	-		HGI48_RS16870	0.40	-0.1
3,777,928	-		HGI48_RS16870	0.40	+0.1
3,777,928	-		HGI48_RS16870	0.40	-0.9
3,777,928	-		HGI48_RS16870	0.40	+0.4
3,777,928	-		HGI48_RS16870	0.40	+1.5
3,777,931	+		HGI48_RS16870	0.40	-0.2
3,777,931	+		HGI48_RS16870	0.40	+0.2
3,777,931	+		HGI48_RS16870	0.40	-0.2
3,777,931	+		HGI48_RS16870	0.40	-0.4
3,777,932	-		HGI48_RS16870	0.40	+0.9
3,777,932	-		HGI48_RS16870	0.40	-0.1
3,777,933	+		HGI48_RS16870	0.40	+1.8
3,777,933	+				+2.0
3,777,934	-		HGI48_RS16870	0.40	-0.1
3,777,934	-		HGI48_RS16870	0.40	-0.1
3,777,991	+		HGI48_RS16870	0.44	-0.4
3,777,992	-		HGI48_RS16870	0.45	+1.0
3,777,992	-		HGI48_RS16870	0.45	-1.7
3,777,992	-		HGI48_RS16870	0.45	+0.3
3,777,998	+		HGI48_RS16870	0.45	+1.1
3,778,117	+		HGI48_RS16870	0.54	-2.4
3,778,117	+		HGI48_RS16870	0.54	-0.1
3,778,118	-		HGI48_RS16870	0.54	+1.3
3,778,132	+		HGI48_RS16870	0.55	-0.4
3,778,132	+		HGI48_RS16870	0.55	-1.9
3,778,132	+		HGI48_RS16870	0.55	-0.3
3,778,132	+		HGI48_RS16870	0.55	-0.5
3,778,133	-		HGI48_RS16870	0.55	-0.6
3,778,133	-		HGI48_RS16870	0.55	-0.1
3,778,163	+		HGI48_RS16870	0.58	-0.4
3,778,163	+		HGI48_RS16870	0.58	+0.8
3,778,163	+				+3.0
3,778,181	+		HGI48_RS16870	0.59	+0.7
3,778,211	+		HGI48_RS16870	0.61	-0.0
3,778,211	+		HGI48_RS16870	0.61	+0.8
3,778,211	+				+2.0
3,778,212	-		HGI48_RS16870	0.62	-2.1
3,778,212	-		HGI48_RS16870	0.62	-2.1
3,778,212	-		HGI48_RS16870	0.62	-0.3
3,778,212	-		HGI48_RS16870	0.62	-0.8
3,778,212	-		HGI48_RS16870	0.62	+0.0
3,778,215	+		HGI48_RS16870	0.62	-1.4
3,778,215	+		HGI48_RS16870	0.62	+0.5
3,778,230	+		HGI48_RS16870	0.63	-0.3
3,778,230	+		HGI48_RS16870	0.63	+0.7
3,778,230	+		HGI48_RS16870	0.63	+0.2
3,778,231	-		HGI48_RS16870	0.63	+0.8
3,778,231	-		HGI48_RS16870	0.63	-1.4
3,778,231	-		HGI48_RS16870	0.63	-1.1
3,778,269	+		HGI48_RS16870	0.66	+0.1
3,778,269	+		HGI48_RS16870	0.66	-0.3
3,778,269	+		HGI48_RS16870	0.66	+1.3
3,778,269	+		HGI48_RS16870	0.66	+0.3
3,778,269	+				+2.0
3,778,270	-		HGI48_RS16870	0.66	+1.0
3,778,270	-		HGI48_RS16870	0.66	-1.1
3,778,270	-		HGI48_RS16870	0.66	+0.5
3,778,270	-		HGI48_RS16870	0.66	-1.7
3,778,270	-		HGI48_RS16870	0.66	+0.5
3,778,270	-		HGI48_RS16870	0.66	-1.9
3,778,270	-		HGI48_RS16870	0.66	-0.7
3,778,270	-		HGI48_RS16870	0.66	-0.0
3,778,270	-		HGI48_RS16870	0.66	-0.5
3,778,325	+		HGI48_RS16870	0.70	-0.1
3,778,326	-		HGI48_RS16870	0.70	-0.3
3,778,326	-		HGI48_RS16870	0.70	-0.5
3,778,326	-		HGI48_RS16870	0.70	-0.9
3,778,326	-		HGI48_RS16870	0.70	+0.5
3,778,388	+		HGI48_RS16870	0.75	+0.8
3,778,408	+		HGI48_RS16870	0.77	-0.9
3,778,408	+		HGI48_RS16870	0.77	-0.9
3,778,409	-		HGI48_RS16870	0.77	+0.1
3,778,409	-		HGI48_RS16870	0.77	-0.9
3,778,409	-		HGI48_RS16870	0.77	+0.5
3,778,409	-		HGI48_RS16870	0.77	+0.8
3,778,409	-		HGI48_RS16870	0.77	-1.1