Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16410

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,675,445	+		HGI48_RS16405	0.37	-0.2
3,675,446	-		HGI48_RS16405	0.37	+0.4
3,675,446	-		HGI48_RS16405	0.37	+1.2
3,675,533	-		HGI48_RS16405	0.43	-0.7
3,675,533	-		HGI48_RS16405	0.43	+0.1
3,675,594	+				+0.4
3,675,594	+		HGI48_RS16405	0.47	+0.1
3,675,595	-		HGI48_RS16405	0.47	-0.8
3,675,716	-		HGI48_RS16405	0.55	-0.3
3,675,775	-		HGI48_RS16405	0.59	-1.9
3,675,775	-		HGI48_RS16405	0.59	+0.4
3,675,775	-		HGI48_RS16405	0.59	-0.9
3,675,968	-		HGI48_RS16405	0.72	-1.2
3,676,212	+		HGI48_RS16405	0.88	+0.8
3,676,213	-		HGI48_RS16405	0.88	-0.6
3,676,391	+				-1.7
3,676,392	-				+0.1
3,676,492	+				-0.8
3,676,520	-				+0.4
3,677,049	-		HGI48_RS16410	0.62	-2.2
3,677,106	+		HGI48_RS16410	0.67	-1.6
3,677,106	+		HGI48_RS16410	0.67	-0.2
3,677,106	+		HGI48_RS16410	0.67	-0.6
3,677,107	-				-1.2
3,677,107	-		HGI48_RS16410	0.67	+0.1
3,677,107	-		HGI48_RS16410	0.67	+0.4
3,677,107	-		HGI48_RS16410	0.67	-0.4
3,677,107	-		HGI48_RS16410	0.67	-2.6
3,677,107	-				+1.4
3,677,107	-		HGI48_RS16410	0.67	-0.1
3,677,258	+		HGI48_RS16410	0.82	+0.6
3,677,259	-		HGI48_RS16410	0.82	-2.4
3,677,313	-		HGI48_RS16410	0.87	-0.6
3,677,413	+				-0.2
3,677,413	+				-0.2
3,677,413	+				-1.0
3,677,413	+				+0.4
3,677,414	-				+0.8
3,677,414	-				-0.4
3,677,414	-				-1.9
3,677,414	-				-1.2
3,677,414	-				-0.4
3,677,435	+				+1.2
3,677,436	-				+0.1
3,677,436	-				-1.4
3,677,443	-				-0.7
3,677,443	-				-0.3
3,677,485	+				-0.5
3,677,485	+				+0.8
3,677,491	+				-0.4
3,677,492	-				+1.6
3,677,492	-				-1.4
3,677,694	-		HGI48_RS16415	0.26	-0.1
3,677,720	+		HGI48_RS16415	0.29	-0.1
3,677,720	+		HGI48_RS16415	0.29	-0.2
3,677,720	+		HGI48_RS16415	0.29	-1.6
3,677,721	-		HGI48_RS16415	0.29	+0.3
3,677,824	+		HGI48_RS16415	0.40	+0.7
3,677,824	+		HGI48_RS16415	0.40	-1.4
3,677,825	-		HGI48_RS16415	0.40	-2.0
3,677,825	-		HGI48_RS16415	0.40	+0.7
3,677,831	+		HGI48_RS16415	0.40	-0.8
3,677,866	+		HGI48_RS16415	0.44	-1.9
3,677,866	+		HGI48_RS16415	0.44	-1.0
3,677,867	-		HGI48_RS16415	0.44	-0.9
3,677,867	-		HGI48_RS16415	0.44	+0.9
3,678,070	+		HGI48_RS16415	0.64	-0.9
3,678,071	-		HGI48_RS16415	0.64	+0.0
3,678,071	-		HGI48_RS16415	0.64	+0.0
3,678,071	-		HGI48_RS16415	0.64	-0.6
3,678,121	+		HGI48_RS16415	0.69	-2.2
3,678,121	+		HGI48_RS16415	0.69	-0.8
3,678,121	+		HGI48_RS16415	0.69	+0.7
3,678,122	-		HGI48_RS16415	0.70	+0.7
3,678,122	-		HGI48_RS16415	0.70	+0.4
3,678,122	-		HGI48_RS16415	0.70	+1.0
3,678,122	-		HGI48_RS16415	0.70	+0.9
3,678,122	-		HGI48_RS16415	0.70	+0.4
3,678,122	-		HGI48_RS16415	0.70	-0.6
3,678,231	+		HGI48_RS16415	0.81	-0.4
3,678,237	-		HGI48_RS16415	0.81	-2.2
3,678,271	+		HGI48_RS16415	0.85	+0.2
3,678,271	+				+0.4
3,678,271	+		HGI48_RS16415	0.85	-2.4
3,678,272	-		HGI48_RS16415	0.85	-0.5
3,678,272	-		HGI48_RS16415	0.85	+1.0
3,678,272	-				-1.2
3,678,276	+		HGI48_RS16415	0.85	-0.6
3,678,276	+		HGI48_RS16415	0.85	+0.8
3,678,276	+		HGI48_RS16415	0.85	+0.4
3,678,276	+		HGI48_RS16415	0.85	-0.1
3,678,276	+		HGI48_RS16415	0.85	-1.6
3,678,277	-		HGI48_RS16415	0.85	-0.1
3,678,277	-				+2.2
3,678,277	-		HGI48_RS16415	0.85	-0.2
3,678,294	-		HGI48_RS16415	0.87	-0.9
3,678,294	-		HGI48_RS16415	0.87	+0.4
3,678,294	-		HGI48_RS16415	0.87	-0.8
3,678,332	+				-0.2
3,678,332	+				+1.0
3,678,332	+				-0.6
3,678,332	+				+0.2
3,678,333	-				+0.4
3,678,333	-				-0.3
3,678,333	-				+0.0
3,678,333	-				-0.2