Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,473,930	+				-1.5
3,473,930	+				-0.4
3,473,931	-				+1.0
3,473,931	-				-0.3
3,473,969	+		HGI48_RS15440	0.13	+0.4
3,473,999	+		HGI48_RS15440	0.21	-2.2
3,473,999	+		HGI48_RS15440	0.21	+0.6
3,474,000	-				-0.6
3,474,002	+		HGI48_RS15440	0.21	-0.2
3,474,002	+		HGI48_RS15440	0.21	-1.0
3,474,003	-		HGI48_RS15440	0.21	-0.9
3,474,014	+		HGI48_RS15440	0.24	-1.0
3,474,272	+		HGI48_RS15440	0.86	+0.7
3,474,273	-		HGI48_RS15440	0.87	+0.0
3,474,409	+				-2.2
3,474,409	+				+0.6
3,474,409	+				-0.3
3,474,410	-				-1.0
3,474,410	-				-0.4
3,474,410	-				+2.7
3,474,410	-				-0.1
3,474,453	-				-2.2
3,474,464	-				+0.1
3,474,464	-				-0.3
3,474,637	+				-1.0
3,474,638	-				-2.4
3,474,720	-				-1.6
3,474,732	-				-0.2
3,474,741	-				+0.7
3,474,837	+				-1.2
3,475,117	-		HGI48_RS15445	0.48	-1.4
3,475,142	+				+0.4
3,475,144	+		HGI48_RS15445	0.54	+1.4
3,475,145	-		HGI48_RS15445	0.54	-0.6
3,475,145	-		HGI48_RS15445	0.54	+0.2
3,475,238	+		HGI48_RS15445	0.73	+0.5
3,475,614	-		HGI48_RS15450	0.11	+0.7
3,475,696	-		HGI48_RS15450	0.15	-0.3
3,475,696	-		HGI48_RS15450	0.15	-0.0
3,475,704	-		HGI48_RS15450	0.15	-1.0
3,475,708	+		HGI48_RS15450	0.15	-0.3
3,475,708	+		HGI48_RS15450	0.15	-0.4
3,475,708	+		HGI48_RS15450	0.15	-0.2
3,475,709	-		HGI48_RS15450	0.15	+1.4
3,475,803	-		HGI48_RS15450	0.20	+0.6
3,475,899	+		HGI48_RS15450	0.25	-2.4
3,475,900	-		HGI48_RS15450	0.25	-0.3
3,475,900	-		HGI48_RS15450	0.25	-0.8
3,475,998	-				+0.4
3,475,998	-		HGI48_RS15450	0.29	-0.0
3,476,016	-		HGI48_RS15450	0.30	+0.1
3,476,063	+		HGI48_RS15450	0.32	-1.0
3,476,136	-		HGI48_RS15450	0.36	-1.4
3,476,136	-		HGI48_RS15450	0.36	+1.1
3,476,141	-		HGI48_RS15450	0.36	-1.6
3,476,141	-		HGI48_RS15450	0.36	-0.6