Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15065

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,389,045	+		HGI48_RS15060	0.42	+0.7
3,389,054	-		HGI48_RS15060	0.43	+0.2
3,389,079	+		HGI48_RS15060	0.45	+1.1
3,389,142	-		HGI48_RS15060	0.51	-0.2
3,389,142	-		HGI48_RS15060	0.51	-1.1
3,389,279	+		HGI48_RS15060	0.64	-0.7
3,389,518	+		HGI48_RS15060	0.86	-0.1
3,389,518	+		HGI48_RS15060	0.86	+0.2
3,389,518	+		HGI48_RS15060	0.86	-0.7
3,389,519	-		HGI48_RS15060	0.86	-2.5
3,389,615	+				-0.5
3,389,677	+				-0.1
3,389,677	+				+0.2
3,389,678	-				-0.7
3,389,683	+				+0.3
3,389,683	+				-0.3
3,389,746	+				-1.6
3,389,848	+				+0.6
3,389,923	+				+0.7
3,389,924	-				+0.3
3,389,924	-				+1.7
3,389,999	+				+3.1
3,390,000	-				-0.3
3,390,050	-				-1.3
3,390,050	-				-0.2
3,390,140	+		HGI48_RS15065	0.11	+0.7
3,390,199	+				-1.3
3,390,199	+				-0.7
3,390,199	+		HGI48_RS15065	0.16	-0.1
3,390,199	+		HGI48_RS15065	0.16	+1.6
3,390,199	+		HGI48_RS15065	0.16	-2.3
3,390,200	-		HGI48_RS15065	0.16	+0.0
3,390,200	-		HGI48_RS15065	0.16	-0.9
3,390,210	-		HGI48_RS15065	0.17	-1.7
3,390,210	-		HGI48_RS15065	0.17	-1.0
3,390,210	-		HGI48_RS15065	0.17	+0.6
3,390,215	+		HGI48_RS15065	0.17	-0.2
3,390,298	+		HGI48_RS15065	0.24	+0.1
3,390,298	+		HGI48_RS15065	0.24	-2.0
3,390,298	+		HGI48_RS15065	0.24	-0.2
3,390,328	-		HGI48_RS15065	0.27	+0.7
3,390,328	-		HGI48_RS15065	0.27	-0.7
3,390,362	+		HGI48_RS15065	0.29	-0.7
3,390,363	-		HGI48_RS15065	0.29	-0.0
3,390,407	+		HGI48_RS15065	0.33	-0.4
3,390,407	+		HGI48_RS15065	0.33	+0.3
3,390,407	+		HGI48_RS15065	0.33	+0.5
3,390,407	+				+0.9
3,390,407	+		HGI48_RS15065	0.33	-1.3
3,390,480	-		HGI48_RS15065	0.39	-0.1
3,390,480	-				+0.9
3,390,480	-		HGI48_RS15065	0.39	-0.4
3,390,480	-		HGI48_RS15065	0.39	-0.0
3,390,566	+		HGI48_RS15065	0.46	+0.5
3,390,566	+		HGI48_RS15065	0.46	-0.1
3,390,567	-		HGI48_RS15065	0.46	-1.2
3,390,567	-		HGI48_RS15065	0.46	+0.0
3,390,567	-		HGI48_RS15065	0.46	-0.5
3,390,699	-		HGI48_RS15065	0.57	-0.4
3,390,820	+		HGI48_RS15065	0.67	+0.2
3,390,821	-		HGI48_RS15065	0.67	-0.4
3,390,923	+		HGI48_RS15065	0.76	+0.6
3,390,924	-		HGI48_RS15065	0.76	-0.7
3,390,924	-		HGI48_RS15065	0.76	-0.5
3,391,069	+		HGI48_RS15065	0.88	+0.3
3,391,069	+				-0.7
3,391,070	-		HGI48_RS15065	0.88	-1.5
3,391,091	+		HGI48_RS15065	0.89	-0.5
3,391,092	-		HGI48_RS15065	0.89	-2.3
3,391,092	-		HGI48_RS15065	0.89	-0.7
3,391,092	-		HGI48_RS15065	0.89	-1.5
3,391,092	-		HGI48_RS15065	0.89	+0.2
3,391,092	-		HGI48_RS15065	0.89	+0.9
3,391,094	-		HGI48_RS15065	0.90	-0.4
3,391,094	-		HGI48_RS15065	0.90	-0.3
3,391,094	-		HGI48_RS15065	0.90	-0.4
3,391,094	-		HGI48_RS15065	0.90	+0.3
3,391,154	+				+1.3
3,391,154	+				+0.7
3,391,160	+				+0.5
3,391,177	-				+0.7
3,391,218	-				+0.3
3,391,218	-				-0.1
3,391,218	-				+1.2
3,391,222	+				-1.3
3,391,223	-				-0.8
3,391,230	+				-0.7
3,391,231	-				-0.4
3,391,231	-				-2.1
3,391,361	+		HGI48_RS15070	0.12	-3.0
3,391,361	+		HGI48_RS15070	0.12	+1.5
3,391,362	-				+1.1
3,391,362	-		HGI48_RS15070	0.12	-0.2
3,391,362	-		HGI48_RS15070	0.12	-0.7
3,391,362	-		HGI48_RS15070	0.12	+0.2
3,391,362	-		HGI48_RS15070	0.12	+0.7
3,391,366	-		HGI48_RS15070	0.13	-0.4
3,391,366	-		HGI48_RS15070	0.13	+0.5
3,391,377	-		HGI48_RS15070	0.14	+0.0
3,391,625	+		HGI48_RS15070	0.38	-0.7
3,391,638	-		HGI48_RS15070	0.39	+0.6
3,391,659	-		HGI48_RS15070	0.41	-0.0
3,391,673	+		HGI48_RS15070	0.43	+0.6
3,391,674	-		HGI48_RS15070	0.43	+0.1
3,391,785	+		HGI48_RS15070	0.54	+0.2
3,391,785	+		HGI48_RS15070	0.54	-1.1
3,391,785	+				-1.3
3,391,785	+		HGI48_RS15070	0.54	-2.0
3,391,786	-		HGI48_RS15070	0.54	-0.3
3,391,786	-		HGI48_RS15070	0.54	-0.1
3,391,818	-		HGI48_RS15070	0.57	-1.5
3,391,867	+		HGI48_RS15070	0.62	+0.0
3,391,867	+				+0.9
3,391,867	+		HGI48_RS15070	0.62	+0.3
3,391,868	-		HGI48_RS15070	0.62	+0.3
3,391,868	-		HGI48_RS15070	0.62	+0.6
3,391,868	-		HGI48_RS15070	0.62	+0.1
3,391,868	-		HGI48_RS15070	0.62	+0.5
3,391,913	+		HGI48_RS15070	0.66	-0.4
3,392,051	+		HGI48_RS15070	0.80	-1.3
3,392,052	-		HGI48_RS15070	0.80	+0.1
3,392,134	+				-0.3
3,392,135	-		HGI48_RS15070	0.88	-0.5
3,392,199	-				-0.2
3,392,200	+				+0.7