Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14455

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,244,642	-		HGI48_RS14450	0.41	-0.7
3,244,689	+		HGI48_RS14450	0.45	+0.3
3,244,689	+		HGI48_RS14450	0.45	+0.1
3,244,757	+		HGI48_RS14450	0.50	-0.7
3,244,757	+		HGI48_RS14450	0.50	-0.5
3,245,082	-		HGI48_RS14450	0.73	+0.2
3,245,093	+		HGI48_RS14450	0.74	-0.0
3,245,094	-		HGI48_RS14450	0.74	-0.2
3,245,133	+		HGI48_RS14450	0.77	-1.7
3,245,201	+		HGI48_RS14450	0.82	-2.0
3,245,204	+		HGI48_RS14450	0.82	-0.1
3,245,204	+		HGI48_RS14450	0.82	-0.6
3,245,204	+		HGI48_RS14450	0.82	+0.4
3,245,326	-				-0.6
3,245,333	+				+0.2
3,245,333	+				-0.1
3,245,334	-				-0.8
3,245,363	+				+0.9
3,245,363	+				-1.0
3,245,363	+				+0.3
3,245,364	-				-0.3
3,245,364	-				-0.4
3,245,364	-				+0.9
3,245,364	-				-0.2
3,245,364	-				+0.0
3,245,366	+				+0.9
3,245,366	+				-1.0
3,245,367	-				-1.5
3,245,367	-				-0.1
3,245,417	+				+1.3
3,245,417	+				-1.3
3,245,462	-				+0.9
3,245,476	-				+0.5
3,245,540	+		HGI48_RS14455	0.14	-0.0
3,245,540	+		HGI48_RS14455	0.14	-0.1
3,245,541	-		HGI48_RS14455	0.14	+0.3
3,245,544	+				+1.9
3,245,544	+		HGI48_RS14455	0.15	-0.9
3,245,599	-		HGI48_RS14455	0.23	+0.7
3,245,604	+		HGI48_RS14455	0.24	-0.9
3,245,604	+		HGI48_RS14455	0.24	-2.2
3,245,604	+		HGI48_RS14455	0.24	+0.5
3,245,605	-		HGI48_RS14455	0.24	-0.6
3,245,605	-		HGI48_RS14455	0.24	-0.6
3,245,605	-		HGI48_RS14455	0.24	-1.1
3,245,605	-		HGI48_RS14455	0.24	-0.8
3,245,750	+		HGI48_RS14455	0.45	-0.0
3,245,750	+		HGI48_RS14455	0.45	+0.5
3,245,750	+				+0.7
3,245,751	-		HGI48_RS14455	0.45	+0.4
3,245,751	-		HGI48_RS14455	0.45	-0.4
3,245,751	-		HGI48_RS14455	0.45	-0.0
3,245,751	-		HGI48_RS14455	0.45	-2.7
3,245,826	+		HGI48_RS14455	0.57	+0.0
3,245,827	-		HGI48_RS14455	0.57	-0.3
3,245,846	-				-0.3
3,245,918	-				+0.7
3,245,963	+		HGI48_RS14455	0.77	+0.3
3,245,963	+		HGI48_RS14455	0.77	-0.9
3,245,963	+		HGI48_RS14455	0.77	-2.0
3,245,963	+		HGI48_RS14455	0.77	+0.0
3,245,963	+		HGI48_RS14455	0.77	+0.4
3,245,964	-		HGI48_RS14455	0.77	-1.9
3,245,964	-		HGI48_RS14455	0.77	+0.5
3,245,964	-		HGI48_RS14455	0.77	-1.9
3,245,985	+		HGI48_RS14455	0.80	-0.2
3,246,108	-				+0.1
3,246,108	-				+0.5
3,246,158	+				-0.5
3,246,189	-				-0.3
3,246,216	+				+0.5
3,246,241	+				+0.2
3,246,241	+				-0.3
3,246,263	+				-0.1
3,246,275	+				+0.9
3,246,276	-				-0.2
3,246,276	-				-0.1
3,246,283	+				-2.3
3,246,462	+				+1.5
3,246,469	+		HGI48_RS14460	0.14	+0.3
3,246,470	-		HGI48_RS14460	0.14	+0.1
3,246,483	+		HGI48_RS14460	0.15	-1.1
3,246,530	+		HGI48_RS14460	0.20	+0.3
3,246,530	+		HGI48_RS14460	0.20	+2.3
3,246,530	+		HGI48_RS14460	0.20	-0.5
3,246,530	+		HGI48_RS14460	0.20	+0.5
3,246,530	+		HGI48_RS14460	0.20	-0.1
3,246,530	+		HGI48_RS14460	0.20	+0.6
3,246,530	+		HGI48_RS14460	0.20	-0.4
3,246,530	+				+0.3
3,246,530	+				+0.3
3,246,531	-		HGI48_RS14460	0.20	-0.2
3,246,531	-		HGI48_RS14460	0.20	+1.1
3,246,531	-		HGI48_RS14460	0.20	-0.6
3,246,531	-		HGI48_RS14460	0.20	+0.8
3,246,531	-		HGI48_RS14460	0.20	+0.3
3,246,531	-		HGI48_RS14460	0.20	+0.5
3,246,560	+		HGI48_RS14460	0.23	-0.3
3,246,560	+		HGI48_RS14460	0.23	-2.0
3,246,560	+				-0.7
3,246,561	-		HGI48_RS14460	0.23	-1.5
3,246,561	-		HGI48_RS14460	0.23	+0.3
3,246,561	-		HGI48_RS14460	0.23	-0.7
3,246,884	+		HGI48_RS14460	0.56	+1.7
3,246,884	+		HGI48_RS14460	0.56	-0.3
3,246,939	+		HGI48_RS14460	0.62	+0.4
3,246,939	+		HGI48_RS14460	0.62	-0.4
3,246,939	+		HGI48_RS14460	0.62	-1.6
3,246,940	-		HGI48_RS14460	0.62	-0.5
3,246,940	-		HGI48_RS14460	0.62	+0.3
3,246,940	-		HGI48_RS14460	0.62	-1.6
3,246,940	-		HGI48_RS14460	0.62	-0.5
3,246,940	-		HGI48_RS14460	0.62	-0.3
3,246,940	-		HGI48_RS14460	0.62	-0.2
3,247,041	+		HGI48_RS14460	0.72	-0.7
3,247,073	+		HGI48_RS14460	0.75	-1.3