Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,226,321	+		HGI48_RS14355	0.64	-1.3
3,226,350	+		HGI48_RS14355	0.65	+1.2
3,226,354	+		HGI48_RS14355	0.65	-2.0
3,226,354	+		HGI48_RS14355	0.65	-0.7
3,226,603	-		HGI48_RS14355	0.77	-1.1
3,226,720	-		HGI48_RS14355	0.83	-1.0
3,226,730	+		HGI48_RS14355	0.83	-1.7
3,226,938	+				-0.7
3,226,939	-				+0.3
3,227,103	+				+0.1
3,227,132	+				-0.1
3,227,132	+				+1.3
3,227,132	+				-1.1
3,227,132	+				-0.5
3,227,133	-				+0.9
3,227,133	-				-1.3
3,227,133	-				-2.1
3,227,133	-				-1.7
3,227,133	-				-0.8
3,227,133	-				+0.7
3,227,296	+		HGI48_RS14360	0.15	+0.3
3,227,296	+		HGI48_RS14360	0.15	-0.3
3,227,296	+		HGI48_RS14360	0.15	+0.2
3,227,296	+		HGI48_RS14360	0.15	+0.9
3,227,297	-				+0.3
3,227,297	-		HGI48_RS14360	0.15	+0.6
3,227,297	-		HGI48_RS14360	0.15	+0.0
3,227,297	-		HGI48_RS14360	0.15	+0.7
3,227,297	-		HGI48_RS14360	0.15	-0.2
3,227,342	+		HGI48_RS14360	0.22	-0.0
3,227,448	+		HGI48_RS14360	0.40	+1.3
3,227,448	+		HGI48_RS14360	0.40	-1.3
3,227,449	-				+1.6
3,227,497	+		HGI48_RS14360	0.47	+1.0
3,227,497	+		HGI48_RS14360	0.47	-0.4
3,227,685	+				+3.4
3,227,685	+		HGI48_RS14360	0.78	-0.1
3,227,685	+		HGI48_RS14360	0.78	-0.6
3,227,686	-		HGI48_RS14360	0.78	+1.1
3,227,686	-		HGI48_RS14360	0.78	-0.7
3,227,686	-		HGI48_RS14360	0.78	+1.0
3,227,686	-		HGI48_RS14360	0.78	-1.3
3,227,695	+		HGI48_RS14360	0.80	-0.7
3,227,695	+		HGI48_RS14360	0.80	+0.1
3,227,695	+		HGI48_RS14360	0.80	-1.3
3,227,695	+		HGI48_RS14360	0.80	-0.1
3,227,696	-		HGI48_RS14360	0.80	-1.0
3,227,696	-		HGI48_RS14360	0.80	-2.3
3,227,696	-		HGI48_RS14360	0.80	+0.8
3,227,696	-		HGI48_RS14360	0.80	+0.9
3,227,699	+		HGI48_RS14360	0.80	-0.1
3,227,700	-		HGI48_RS14360	0.80	-0.7
3,227,880	+				-0.2
3,227,880	+				-0.4
3,227,880	+				+1.0
3,227,880	+				-0.2
3,227,881	-				+0.1
3,227,881	-				-0.4
3,227,900	-				-1.7
3,227,911	+				-3.1
3,227,912	-				-0.2
3,227,912	-				+0.8
3,227,912	-				-0.1
3,227,936	+				-1.7
3,228,046	+		HGI48_RS14365	0.25	+1.0
3,228,046	+		HGI48_RS14365	0.25	-0.5
3,228,046	+		HGI48_RS14365	0.25	-1.7
3,228,050	+		HGI48_RS14365	0.25	-0.2
3,228,050	+		HGI48_RS14365	0.25	-0.6
3,228,051	-				-0.7
3,228,084	-		HGI48_RS14365	0.32	-1.3
3,228,139	+		HGI48_RS14365	0.41	-1.0
3,228,139	+		HGI48_RS14365	0.41	-0.1
3,228,139	+		HGI48_RS14365	0.41	+1.0
3,228,139	+				+1.3
3,228,139	+		HGI48_RS14365	0.41	+0.3
3,228,139	+		HGI48_RS14365	0.41	+0.3
3,228,140	-		HGI48_RS14365	0.42	+0.1
3,228,140	-				-0.7
3,228,249	-				-1.3
3,228,277	+		HGI48_RS14365	0.66	-1.4
3,228,485	+				-1.3
3,228,485	+				+0.7
3,228,486	-				-0.3
3,228,486	-				+1.1
3,228,499	-				+0.3
3,228,500	+				+0.3
3,228,500	+				+0.6
3,228,500	+				+0.9
3,228,500	+				-1.2
3,228,501	-				-2.1
3,228,501	-				-0.5
3,228,501	-				+2.1
3,228,501	-				-1.1
3,228,501	-				-0.3
3,228,501	-				-1.3
3,228,501	-				-0.2
3,228,501	-				-2.5
3,228,501	-				-0.1
3,228,504	-				-0.7
3,228,515	-				+0.6
3,228,515	-				+0.2
3,228,601	-				-1.0
3,228,601	-				+1.2
3,228,617	+				-0.3
3,228,617	+				+0.8
3,228,618	-				+0.9
3,228,789	-		HGI48_RS14370	0.42	-0.2
3,228,789	-		HGI48_RS14370	0.42	+0.3
3,228,792	+		HGI48_RS14370	0.43	-3.4
3,228,792	+		HGI48_RS14370	0.43	-1.7