Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,083,629	+		HGI48_RS13835	0.67	-0.4
3,083,629	+		HGI48_RS13835	0.67	-0.9
3,083,630	-		HGI48_RS13835	0.67	-0.1
3,083,692	+		HGI48_RS13835	0.69	-1.5
3,083,692	+		HGI48_RS13835	0.69	-0.3
3,083,692	+		HGI48_RS13835	0.69	-0.1
3,083,693	-		HGI48_RS13835	0.69	-1.5
3,083,703	+		HGI48_RS13835	0.70	+0.2
3,083,703	+		HGI48_RS13835	0.70	-0.5
3,083,704	-		HGI48_RS13835	0.70	-0.8
3,083,737	-				-0.4
3,083,790	-		HGI48_RS13835	0.73	-1.1
3,083,790	-		HGI48_RS13835	0.73	-0.1
3,083,872	+		HGI48_RS13835	0.77	+0.6
3,084,076	+		HGI48_RS13835	0.85	+0.9
3,084,106	+		HGI48_RS13835	0.86	-0.9
3,084,107	-		HGI48_RS13835	0.86	-0.1
3,084,107	-		HGI48_RS13835	0.86	-0.9
3,084,107	-		HGI48_RS13835	0.86	+0.6
3,084,196	+				+1.2
3,084,197	-				+1.0
3,084,197	-				-0.1
3,084,293	-				+0.0
3,084,293	-				-0.5
3,084,366	-				-1.0
3,084,427	+				+1.5
3,084,428	-				+1.5
3,084,428	-				-0.4
3,084,483	-				-2.4
3,084,488	+				-1.3
3,084,488	+				+0.5
3,084,489	-				-0.8
3,084,489	-				+1.3
3,084,492	-				+0.2
3,084,492	-				+0.6
3,084,492	-				+0.5
3,084,852	-		HGI48_RS13840	0.60	-1.2
3,084,899	+				-1.4
3,085,104	-				-0.5
3,085,153	+		HGI48_RS13845	0.15	-0.2
3,085,189	+		HGI48_RS13845	0.19	+0.1
3,085,189	+		HGI48_RS13845	0.19	-0.1
3,085,224	-		HGI48_RS13845	0.23	+0.8
3,085,246	-		HGI48_RS13845	0.26	+0.6
3,085,269	+		HGI48_RS13845	0.28	+0.2
3,085,270	-		HGI48_RS13845	0.28	-0.5
3,085,322	+		HGI48_RS13845	0.34	+0.2
3,085,376	+		HGI48_RS13845	0.40	+0.0
3,085,386	+		HGI48_RS13845	0.41	-1.2
3,085,404	-		HGI48_RS13845	0.43	-2.1
3,085,541	-		HGI48_RS13845	0.59	-0.6
3,085,625	-		HGI48_RS13845	0.68	+0.2
3,085,642	-		HGI48_RS13845	0.70	-0.6
3,085,676	-				+2.2
3,085,717	-		HGI48_RS13845	0.79	-2.0
3,085,805	+		HGI48_RS13845	0.88	+0.3
3,085,806	-		HGI48_RS13845	0.89	+0.2
3,085,889	+				-0.7
3,085,890	-				-0.3
3,085,890	-				+1.2
3,085,938	+				+0.8
3,085,938	+				-0.8
3,085,938	+				-0.5
3,085,939	-				-0.7
3,085,939	-				+0.4
3,085,939	-				+0.6
3,085,974	-		HGI48_RS13850	0.13	+0.0
3,085,974	-		HGI48_RS13850	0.13	+0.6
3,086,013	+				+1.0
3,086,013	+		HGI48_RS13850	0.20	-0.0
3,086,013	+				+1.6
3,086,014	-		HGI48_RS13850	0.20	+0.2