Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS12740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,782,649	-				-1.4
2,782,683	-		HGI48_RS12735	0.50	+0.4
2,782,733	-		HGI48_RS12735	0.55	+1.9
2,782,809	+		HGI48_RS12735	0.62	-1.1
2,782,816	-		HGI48_RS12735	0.63	+0.3
2,783,023	+		HGI48_RS12735	0.82	+0.1
2,783,357	-				-1.0
2,783,419	+				+0.6
2,783,499	+				-1.4
2,783,499	+				+0.5
2,783,541	+				+0.1
2,783,589	-				-0.6
2,783,644	+		HGI48_RS12740	0.32	+0.5
2,783,775	+				-0.1
2,783,775	+				-1.4
2,783,775	+				+0.3
2,783,775	+				+0.6
2,783,776	-				+0.6
2,783,776	-				-1.8
2,783,776	-				+1.2
2,783,776	-				-0.5
2,783,777	+				-0.4
2,783,780	-				+0.8
2,783,794	+				+0.6
2,783,914	+		HGI48_RS12745	0.16	-2.2
2,783,914	+		HGI48_RS12745	0.16	-0.4
2,783,914	+		HGI48_RS12745	0.16	-0.1
2,783,914	+		HGI48_RS12745	0.16	+0.6
2,783,914	+				+0.9
2,783,914	+		HGI48_RS12745	0.16	+0.0
2,783,914	+		HGI48_RS12745	0.16	+0.2
2,783,914	+		HGI48_RS12745	0.16	-0.1
2,783,914	+		HGI48_RS12745	0.16	-1.0
2,783,914	+		HGI48_RS12745	0.16	+0.2
2,783,914	+		HGI48_RS12745	0.16	-2.2
2,783,914	+		HGI48_RS12745	0.16	+0.1
2,783,915	-				-0.8
2,783,915	-		HGI48_RS12745	0.16	-1.8
2,783,918	+		HGI48_RS12745	0.17	+0.8
2,784,021	-		HGI48_RS12745	0.48	+0.6
2,784,047	+		HGI48_RS12745	0.56	+0.1
2,784,047	+		HGI48_RS12745	0.56	+0.2
2,784,047	+		HGI48_RS12745	0.56	+0.2
2,784,048	-		HGI48_RS12745	0.57	-0.2
2,784,074	-		HGI48_RS12745	0.65	-1.0
2,784,149	+		HGI48_RS12745	0.87	+0.8
2,784,170	+				+0.2
2,784,289	+				-0.7
2,784,290	-				+0.4
2,784,308	-				+0.4
2,784,316	-				+0.0
2,784,343	+				-1.8
2,784,378	-				-1.0
2,784,401	+				+0.2
2,784,457	+				+0.0
2,784,458	-				-0.1
2,784,467	+				-0.4
2,784,470	+				+0.2
2,784,470	+				+0.2
2,784,470	+				-1.4
2,784,471	-				+1.4
2,784,471	-				-0.3
2,784,483	+				-0.8
2,784,483	+				+0.2
2,784,484	-				+0.8
2,784,502	+		HGI48_RS12750	0.13	-1.4
2,784,502	+				+0.6
2,784,502	+		HGI48_RS12750	0.13	-0.7
2,784,502	+		HGI48_RS12750	0.13	-0.3
2,784,503	+		HGI48_RS12750	0.14	+0.2
2,784,503	-		HGI48_RS12750	0.14	+0.2
2,784,503	-				+1.4
2,784,503	-		HGI48_RS12750	0.14	-1.6
2,784,503	-		HGI48_RS12750	0.14	+0.3
2,784,503	-		HGI48_RS12750	0.14	+0.2
2,784,503	-		HGI48_RS12750	0.14	-0.1
2,784,503	-		HGI48_RS12750	0.14	-0.6
2,784,503	-		HGI48_RS12750	0.14	-0.1
2,784,556	-		HGI48_RS12750	0.29	+0.2
2,784,559	+		HGI48_RS12750	0.30	+0.3
2,784,560	-		HGI48_RS12750	0.30	+0.9
2,784,560	-		HGI48_RS12750	0.30	-0.1
2,784,604	+		HGI48_RS12750	0.43	+0.9
2,784,604	+		HGI48_RS12750	0.43	-0.8
2,784,605	-		HGI48_RS12750	0.43	-2.2
2,784,605	-		HGI48_RS12750	0.43	-0.4
2,784,605	-				+0.2
2,784,678	+		HGI48_RS12750	0.64	-2.4
2,784,679	-		HGI48_RS12750	0.64	+0.0